BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004524
         (1806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   502   e-139
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   502   e-139
ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|2...   496   e-137
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...   493   e-137
ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP...   484   e-134

>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 418

 Score =  502 bits (1293), Expect = e-139
 Identities = 254/349 (72%), Positives = 281/349 (80%)
 Frame = +2

Query: 332  EGSNSEDNKTIWVGDLHFWMDENYLHSCFGHTGEVFSIKVIRNKQTGQSEGYGFVEFYSH 511
            +GSN+ DN+TIWVGDLH WMDENYLHSCF  TGE+ S+KVIRNKQTG SEGYGFVEF+SH
Sbjct: 77   QGSNA-DNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSH 135

Query: 512  TAAEKVLQTYNGAAMPNTEQPFRINWASFSMGDKRSDVGSDRSIFVGDLASDVTDTLLQE 691
             AAEKVLQ Y G  MPNT+QPFR+NWA+FSMGDKRSD G D SIFVGDLASDV+D+LL E
Sbjct: 136  AAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHE 195

Query: 692  TFASKYPSVKGAKVVIDSNTGRSKGYGFVRFGDDSERSQAITEMNGIYCSSRPMRIGIAT 871
            TFA KYPSVK AKVV D+NTGRSKGYGFVRFGD++ERSQA+TEMNG+YCSSRPMRIG AT
Sbjct: 196  TFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAAT 255

Query: 872  PRKXXXXXXXXXXXXXXXXXXXFGQNSQTEGDSTNTTIFVGGLDPSVTDEDLRQTFSQHG 1051
            PRK                    G + Q++GDS NTTIFVGGLDP+V+DEDLRQ FSQ+G
Sbjct: 256  PRKSSGYQQQYSSHGGYASN---GASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYG 312

Query: 1052 EIMSVKIPVGKGCGFVQFANRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQSRVDHGN 1231
            EI+SVKIPVGKGCGFVQFANR+NAE+ALQKLNGTVIGKQTVRLSWGRNPANKQ R D GN
Sbjct: 313  EIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGN 372

Query: 1232 QWSXXXXXXXXXXXXXXXXPPTPDHHSMYAAATPYGAYPVYGSHQQQVS 1378
            QWS                PP P   +MYAAA  YGAYPVYG+HQQQVS
Sbjct: 373  QWSGAYYGGQVYDGYGYALPP-PHDPTMYAAA--YGAYPVYGNHQQQVS 418


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 409

 Score =  502 bits (1292), Expect = e-139
 Identities = 253/349 (72%), Positives = 281/349 (80%)
 Frame = +2

Query: 332  EGSNSEDNKTIWVGDLHFWMDENYLHSCFGHTGEVFSIKVIRNKQTGQSEGYGFVEFYSH 511
            +GSN+ DN+TIWVGDLH WMDENYLHSCF  TGE+ S+KVIRNKQTG SEGYGFVEF+SH
Sbjct: 77   QGSNA-DNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSH 135

Query: 512  TAAEKVLQTYNGAAMPNTEQPFRINWASFSMGDKRSDVGSDRSIFVGDLASDVTDTLLQE 691
             AAEKVLQ Y G  MPNT+QPFR+NWA+FSMGDKRSD G D SIFVGDLASDV+D+LL E
Sbjct: 136  AAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHE 195

Query: 692  TFASKYPSVKGAKVVIDSNTGRSKGYGFVRFGDDSERSQAITEMNGIYCSSRPMRIGIAT 871
            TFA KYPSVK AKVV D+NTGRSKGYGFVRFGD++ERSQA+TEMNG+YCSSRPMRIG AT
Sbjct: 196  TFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAAT 255

Query: 872  PRKXXXXXXXXXXXXXXXXXXXFGQNSQTEGDSTNTTIFVGGLDPSVTDEDLRQTFSQHG 1051
            PRK                   +  + Q++GDS NTTIFVGGLDP+V+DEDLRQ FSQ+G
Sbjct: 256  PRK------------SSGYQQQYSSHVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYG 303

Query: 1052 EIMSVKIPVGKGCGFVQFANRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQSRVDHGN 1231
            EI+SVKIPVGKGCGFVQFANR+NAE+ALQKLNGTVIGKQTVRLSWGRNPANKQ R D GN
Sbjct: 304  EIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGN 363

Query: 1232 QWSXXXXXXXXXXXXXXXXPPTPDHHSMYAAATPYGAYPVYGSHQQQVS 1378
            QWS                PP P   +MYAAA  YGAYPVYG+HQQQVS
Sbjct: 364  QWSGAYYGGQVYDGYGYALPP-PHDPTMYAAA--YGAYPVYGNHQQQVS 409


>ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|222835427|gb|EEE73862.1|
            predicted protein [Populus trichocarpa]
          Length = 429

 Score =  496 bits (1276), Expect = e-137
 Identities = 247/345 (71%), Positives = 268/345 (77%)
 Frame = +2

Query: 344  SEDNKTIWVGDLHFWMDENYLHSCFGHTGEVFSIKVIRNKQTGQSEGYGFVEFYSHTAAE 523
            S +NKTIW+GDLH WMDENYLHSCF  TGE+ SIKVIRNKQTG SEGYGFVEF +H  AE
Sbjct: 89   SGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTHATAE 148

Query: 524  KVLQTYNGAAMPNTEQPFRINWASFSMGDKRSDVGSDRSIFVGDLASDVTDTLLQETFAS 703
            KVLQ Y G  MPNTEQPFR+NWA+FS GDKRSD   D SIFVGDLA+DVTD+LLQETF S
Sbjct: 149  KVLQNYGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLQETFVS 208

Query: 704  KYPSVKGAKVVIDSNTGRSKGYGFVRFGDDSERSQAITEMNGIYCSSRPMRIGIATPRKX 883
            KYPSVK AKVV D+NTGRSKGYGFVRFGDDSER+QA+TEMNG+YCSSRPMRIG ATPRK 
Sbjct: 209  KYPSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIGAATPRKS 268

Query: 884  XXXXXXXXXXXXXXXXXXFGQNSQTEGDSTNTTIFVGGLDPSVTDEDLRQTFSQHGEIMS 1063
                                Q  Q++GDS NTTIFVGGLDP+VTDEDL+Q FSQ+GEI+S
Sbjct: 269  SGYQQQGGYGSNGAS----AQGFQSDGDSNNTTIFVGGLDPNVTDEDLKQPFSQYGEIVS 324

Query: 1064 VKIPVGKGCGFVQFANRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQSRVDHGNQWSX 1243
            VKIPVGKGCGFVQFANR NAEEALQKLNGTVIGKQTVRLSWGRNPANKQ R D G+ W+ 
Sbjct: 325  VKIPVGKGCGFVQFANRDNAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRADFGSPWNG 384

Query: 1244 XXXXXXXXXXXXXXXPPTPDHHSMYAAATPYGAYPVYGSHQQQVS 1378
                           PP  D     AAA  YGAYP+YGSHQQQVS
Sbjct: 385  AYYGGQVYDGYGYALPPPHDPSMYAAAAAAYGAYPIYGSHQQQVS 429


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
            gi|223550967|gb|EEF52453.1| nuclear acid binding protein,
            putative [Ricinus communis]
          Length = 443

 Score =  493 bits (1270), Expect = e-137
 Identities = 249/349 (71%), Positives = 272/349 (77%), Gaps = 1/349 (0%)
 Frame = +2

Query: 335  GSNSEDNKTIWVGDLHFWMDENYLHSCFGHTGEVFSIKVIRNKQTGQSEGYGFVEFYSHT 514
            G    +N+T+W+GDLH WMDENYLH+CF  TGE+ SIKVIRNKQTG SEGYGFVEFY+H 
Sbjct: 102  GGGGGENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHA 161

Query: 515  AAEKVLQTYNGAAMPNTEQPFRINWASFSMGDKRSDVGSDRSIFVGDLASDVTDTLLQET 694
             AEKVLQ Y G  MPNTEQPFR+NWA+FS GDKRSD   D SIFVGDLA+DVTD+LL ET
Sbjct: 162  TAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHET 221

Query: 695  FASKYPSVKGAKVVIDSNTGRSKGYGFVRFGDDSERSQAITEMNGIYCSSRPMRIGIATP 874
            F S+YPSVK AKVV D+NTGRSKGYGFVRFGDD+ER+QA+TEMNG+YCSSR MRIG ATP
Sbjct: 222  FVSRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAATP 281

Query: 875  RKXXXXXXXXXXXXXXXXXXXFGQNSQTEGDSTNTTIFVGGLDPSVTDEDLRQTFSQHGE 1054
            RK                    GQ  Q +GDSTNTTIFVGGLDP+VTDEDL+Q FSQ+GE
Sbjct: 282  RKSTGYQHQGGYVSNGAS----GQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGE 337

Query: 1055 IMSVKIPVGKGCGFVQFANRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQS-RVDHGN 1231
            I+SVKIPVGKGCGFVQFA+RSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQ  R D GN
Sbjct: 338  IVSVKIPVGKGCGFVQFASRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQLRSDFGN 397

Query: 1232 QWSXXXXXXXXXXXXXXXXPPTPDHHSMYAAATPYGAYPVYGSHQQQVS 1378
            QW                 PP P   SMYAA  PYGAYPVYGSHQQQVS
Sbjct: 398  QWGGAYYGGQIYDGYGYALPP-PHDPSMYAA--PYGAYPVYGSHQQQVS 443


>ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
            sativus] gi|449496017|ref|XP_004160013.1| PREDICTED:
            polyadenylate-binding protein RBP47C-like [Cucumis
            sativus]
          Length = 429

 Score =  484 bits (1246), Expect = e-134
 Identities = 245/349 (70%), Positives = 272/349 (77%)
 Frame = +2

Query: 332  EGSNSEDNKTIWVGDLHFWMDENYLHSCFGHTGEVFSIKVIRNKQTGQSEGYGFVEFYSH 511
            +GS SE NKTIWVGDL  WMDENYLHSCF  TGE+ S+KVIRNKQTG SEGYGFVEF+SH
Sbjct: 85   QGSTSE-NKTIWVGDLQHWMDENYLHSCFASTGEISSLKVIRNKQTGISEGYGFVEFFSH 143

Query: 512  TAAEKVLQTYNGAAMPNTEQPFRINWASFSMGDKRSDVGSDRSIFVGDLASDVTDTLLQE 691
            T AEKVLQ Y+   MPNTEQ FR+NWA+FS GDKRS+ GSD SIFVGDLA+DVTD++L E
Sbjct: 144  TTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSVLHE 203

Query: 692  TFASKYPSVKGAKVVIDSNTGRSKGYGFVRFGDDSERSQAITEMNGIYCSSRPMRIGIAT 871
            TFASKY SVK AKVV D NTG SKGYGFVRFGDD+ERSQA+TEMNGIYCSSRPMRIG AT
Sbjct: 204  TFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGIYCSSRPMRIGAAT 263

Query: 872  PRKXXXXXXXXXXXXXXXXXXXFGQNSQTEGDSTNTTIFVGGLDPSVTDEDLRQTFSQHG 1051
            P+K                   F    Q++GD TNTTIF+GGLDP+VTDEDL+Q FSQHG
Sbjct: 264  PKK-SSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIGGLDPNVTDEDLKQLFSQHG 322

Query: 1052 EIMSVKIPVGKGCGFVQFANRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQSRVDHGN 1231
            EI+SVKIPVGKGCGF+QFANR NAEEALQKLNGTVIGKQTVRLSWGR+P NKQ R D+GN
Sbjct: 323  EIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTVRLSWGRSPTNKQYRGDYGN 382

Query: 1232 QWSXXXXXXXXXXXXXXXXPPTPDHHSMYAAATPYGAYPVYGSHQQQVS 1378
             WS                P   D  +MYAAA  YGAYP+YG+HQQQV+
Sbjct: 383  HWSGAYYGGQVYGGYGYALPLPYDPPTMYAAA--YGAYPMYGTHQQQVN 429