BLASTX nr result

ID: Cimicifuga21_contig00004517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004517
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315715.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
ref|XP_002339188.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-18
ref|XP_004168792.1| PREDICTED: fatty acid oxidation complex subu...    94   3e-17
ref|XP_004134079.1| PREDICTED: fatty acid oxidation complex subu...    94   3e-17
ref|XP_004134080.1| PREDICTED: carnitinyl-CoA dehydratase-like [...    93   5e-17

>ref|XP_002315715.1| predicted protein [Populus trichocarpa] gi|222864755|gb|EEF01886.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  105 bits (262), Expect = 1e-20
 Identities = 59/124 (47%), Positives = 74/124 (59%)
 Frame = +2

Query: 2   LDIGMTFPDYFVDLMRAKLGSPKNLRDVVLQGAKIKAEEAVKRGIIDSAYDGGEETIEAA 181
           +DIG+TFPDYF  L RAK+GSP  LRDV+L+GAK+K +EAV+RGI+++A+D  E   EA 
Sbjct: 137 VDIGLTFPDYFTALFRAKVGSPSVLRDVLLRGAKVKGDEAVRRGIVEAAHDNEERLSEAT 196

Query: 182 MRLGEKLGLXXXXXXXXXXXXXXXXXXXXXXXXGEKLGLRKWNGEIYREIRKSSAKDLLP 361
           MRL                              GE+L  RKW GEIY+EIRKS   +L  
Sbjct: 197 MRL------------------------------GEQLASRKWLGEIYKEIRKSLYPELCG 226

Query: 362 VLGL 373
           VLGL
Sbjct: 227 VLGL 230


>ref|XP_002339188.1| predicted protein [Populus trichocarpa] gi|222874606|gb|EEF11737.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 55/131 (41%), Positives = 74/131 (56%)
 Frame = +2

Query: 2   LDIGMTFPDYFVDLMRAKLGSPKNLRDVVLQGAKIKAEEAVKRGIIDSAYDGGEETIEAA 181
           +DIG+T PDY   L RAK+GSP   RDV+L+GAK++ +EAV+ GI++ A+D  E   EAA
Sbjct: 30  VDIGLTIPDYVHALFRAKIGSPSARRDVLLRGAKVRGDEAVRMGIVEGAHDNEERLSEAA 89

Query: 182 MRLGEKLGLXXXXXXXXXXXXXXXXXXXXXXXXGEKLGLRKWNGEIYREIRKSSAKDLLP 361
           MR                               G +L  RKWNGE+Y+EIRKS   +L  
Sbjct: 90  MR------------------------------HGIQLASRKWNGEVYKEIRKSLYPELCV 119

Query: 362 VLGLVEKEVVA 394
           VLGL + +V+A
Sbjct: 120 VLGLGDAKVIA 130


>ref|XP_004168792.1| PREDICTED: fatty acid oxidation complex subunit alpha-like [Cucumis
           sativus]
          Length = 239

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 50/134 (37%), Positives = 76/134 (56%)
 Frame = +2

Query: 2   LDIGMTFPDYFVDLMRAKLGSPKNLRDVVLQGAKIKAEEAVKRGIIDSAYDGGEETIEAA 181
           LD+G+T PDYF+ L ++K+GS   +RD++L+G K++ E AV+ GI+DSA+DG +  + AA
Sbjct: 136 LDLGLTLPDYFMALFKSKIGSSLAMRDLILRGMKVRGEAAVRMGIVDSAHDGEDSVVNAA 195

Query: 182 MRLGEKLGLXXXXXXXXXXXXXXXXXXXXXXXXGEKLGLRKWNGEIYREIRKSSAKDLLP 361
           +RL                              GE+L  R W+GE+Y EIRKS   ++  
Sbjct: 196 VRL------------------------------GEQLAGRNWDGEVYAEIRKSLYPEVSE 225

Query: 362 VLGLVEKEVVAARL 403
           VLGL  K +  ++L
Sbjct: 226 VLGLPGKPISISKL 239


>ref|XP_004134079.1| PREDICTED: fatty acid oxidation complex subunit alpha-like [Cucumis
           sativus]
          Length = 239

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 50/134 (37%), Positives = 76/134 (56%)
 Frame = +2

Query: 2   LDIGMTFPDYFVDLMRAKLGSPKNLRDVVLQGAKIKAEEAVKRGIIDSAYDGGEETIEAA 181
           LD+G+T PDYF+ L ++K+GS   +RD++L+G K++ E AV+ GI+DSA+DG +  + AA
Sbjct: 136 LDLGLTLPDYFMALFKSKIGSSLAMRDLILRGMKVRGEAAVRMGIVDSAHDGEDSVVNAA 195

Query: 182 MRLGEKLGLXXXXXXXXXXXXXXXXXXXXXXXXGEKLGLRKWNGEIYREIRKSSAKDLLP 361
           +RL                              GE+L  R W+GE+Y EIRKS   ++  
Sbjct: 196 VRL------------------------------GEQLAGRNWDGEVYAEIRKSLYPEVSE 225

Query: 362 VLGLVEKEVVAARL 403
           VLGL  K +  ++L
Sbjct: 226 VLGLPGKPISISKL 239


>ref|XP_004134080.1| PREDICTED: carnitinyl-CoA dehydratase-like [Cucumis sativus]
           gi|449523557|ref|XP_004168790.1| PREDICTED:
           carnitinyl-CoA dehydratase-like [Cucumis sativus]
          Length = 239

 Score = 93.2 bits (230), Expect = 5e-17
 Identities = 53/134 (39%), Positives = 74/134 (55%)
 Frame = +2

Query: 2   LDIGMTFPDYFVDLMRAKLGSPKNLRDVVLQGAKIKAEEAVKRGIIDSAYDGGEETIEAA 181
           +D+G++ PDYF  L ++K+ S    RDV+++G K+K E AVK GI DSA+DG    +EAA
Sbjct: 136 VDLGLSLPDYFAALFKSKIASSSVRRDVLMRGMKVKGEAAVKMGIADSAHDGENGVMEAA 195

Query: 182 MRLGEKLGLXXXXXXXXXXXXXXXXXXXXXXXXGEKLGLRKWNGEIYREIRKSSAKDLLP 361
           +RL                              GE+LG RKWNGE Y EIRKS   ++  
Sbjct: 196 VRL------------------------------GEQLGERKWNGEPYAEIRKSLYPEISR 225

Query: 362 VLGLVEKEVVAARL 403
           +LGL EK +  ++L
Sbjct: 226 LLGLPEKAISISKL 239


Top