BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004507
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containi...    65   2e-19
emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]    65   3e-19
ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-17
ref|XP_003623821.1| Pentatricopeptide repeat-containing protein ...    60   3e-17
ref|XP_002511804.1| pentatricopeptide repeat-containing protein,...    62   3e-16

>ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score = 64.7 bits (156), Expect(2) = 2e-19
 Identities = 25/37 (67%), Positives = 35/37 (94%)
 Frame = +3

Query: 144 FTRCGCLEDAHQIFDSMLIRDVVSWTALIVGYAQNGK 254
           + +CGC+EDA+++FDSM I+DV++WTALIVGYAQNG+
Sbjct: 487 YAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGR 523



 Score = 55.5 bits (132), Expect(2) = 2e-19
 Identities = 27/48 (56%), Positives = 31/48 (64%)
 Frame = +1

Query: 1   SHVEALKLFCNMRIAGIHPYQXXXXXXXXXXXELTVLEFGRQVHEKFI 144
           S+ EAL+LFC MRI GIHP Q           ELTVLEFG+QVH  F+
Sbjct: 422 SYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFL 469


>emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score = 64.7 bits (156), Expect(2) = 3e-19
 Identities = 25/37 (67%), Positives = 35/37 (94%)
 Frame = +3

Query: 144 FTRCGCLEDAHQIFDSMLIRDVVSWTALIVGYAQNGK 254
           + +CGC+EDA+++FDSM I+DV++WTALIVGYAQNG+
Sbjct: 113 YAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGR 149



 Score = 55.5 bits (132), Expect(2) = 3e-19
 Identities = 27/48 (56%), Positives = 31/48 (64%)
 Frame = +1

Query: 1   SHVEALKLFCNMRIAGIHPYQXXXXXXXXXXXELTVLEFGRQVHEKFI 144
           S+ EAL+LFC MRI GIHP Q           ELTVLEFG+QVH  F+
Sbjct: 48  SYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFL 95


>ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 852

 Score = 60.5 bits (145), Expect(2) = 2e-17
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = +3

Query: 144 FTRCGCLEDAHQIFDSMLIRDVVSWTALIVGYAQNGK 254
           + +CGCL+DA  IF SM +RDV++WTALIVGYA+NGK
Sbjct: 560 YAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGK 596



 Score = 53.5 bits (127), Expect(2) = 2e-17
 Identities = 26/50 (52%), Positives = 32/50 (64%)
 Frame = +1

Query: 1   SHVEALKLFCNMRIAGIHPYQXXXXXXXXXXXELTVLEFGRQVHEKFILL 150
           SH E+LK FC+MRI+G+ P Q           ELT+LEFG+QVH  FI L
Sbjct: 495 SHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKL 544


>ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498836|gb|AES80039.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 837

 Score = 60.5 bits (145), Expect(2) = 3e-17
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = +3

Query: 144 FTRCGCLEDAHQIFDSMLIRDVVSWTALIVGYAQNGK 254
           + +CGCL+DA  IF SM ++DV++WTA+IVGYAQNGK
Sbjct: 510 YAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGK 546



 Score = 52.8 bits (125), Expect(2) = 3e-17
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = +1

Query: 1   SHVEALKLFCNMRIAGIHPYQXXXXXXXXXXXELTVLEFGRQVHEKFI 144
           SH E+LK+FC+MR+ G++P Q           ELT+LEFG+QVH  FI
Sbjct: 445 SHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFI 492


>ref|XP_002511804.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548984|gb|EEF50473.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 607

 Score = 62.4 bits (150), Expect(2) = 3e-16
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = +3

Query: 144 FTRCGCLEDAHQIFDSMLIRDVVSWTALIVGYAQNGK 254
           + +CG +EDA+ +FDSM IRDV+SWTALIVGYAQNG+
Sbjct: 468 YAKCGGIEDANYVFDSMQIRDVISWTALIVGYAQNGR 504



 Score = 47.4 bits (111), Expect(2) = 3e-16
 Identities = 23/44 (52%), Positives = 29/44 (65%)
 Frame = +1

Query: 1   SHVEALKLFCNMRIAGIHPYQXXXXXXXXXXXELTVLEFGRQVH 132
           S+ +A+KLFC+MRIAG+ P Q           ELTV EFG+QVH
Sbjct: 403 SYEDAIKLFCDMRIAGVCPDQIVLASVLSACAELTVTEFGQQVH 446