BLASTX nr result
ID: Cimicifuga21_contig00004468
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00004468
(3901 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 865 0.0
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 853 0.0
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 850 0.0
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 849 0.0
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 844 0.0
>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
Length = 785
Score = 865 bits (2234), Expect = 0.0
Identities = 440/538 (81%), Positives = 471/538 (87%), Gaps = 9/538 (1%)
Frame = -2
Query: 2142 GIYIPPFKLAQMMRNVEDKSSVEYQRLTWDALRKSINGLVNKVNAANIKNIVTELFEENL 1963
G+YIPPFKLAQMM+ V+DKSS+EYQRLTWDALRKSINGLVNKVNA NIKNI+ ELF ENL
Sbjct: 206 GVYIPPFKLAQMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFGENL 265
Query: 1962 IRGRGLFCRSCMKSQMASPGFTDVFSALVAVVNTKFPEVGEXXXXXXXXXXXRAYKRHDK 1783
IRGRGLFCRSCMKSQMASPGFTDVF+ALVAVVNTKFPEVGE RAYKR+DK
Sbjct: 266 IRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGELLMRRIVLQFKRAYKRNDK 325
Query: 1782 HQLLAAVKFVAHLVNQQVAHEIIAXXXXXXXLDDPSTDGVEVAVGFVTECGSLLQDLSPQ 1603
HQLLAAVKF+AHLVNQQVAHEIIA L++P+ D VEVAVGFV ECGS+LQDLSP+
Sbjct: 326 HQLLAAVKFIAHLVNQQVAHEIIALELLALMLENPTDDSVEVAVGFVKECGSILQDLSPK 385
Query: 1602 GLHGIFERFRGILHEGEIDKRVQFLIEGLFAVRKAKFQGHPAIRPELDLVDQEDQLTHEL 1423
GLHGIFERFRGILHEGEIDKRVQFLIEGLFA+RKAKFQGHPA+RPELDLV+QEDQLTHE+
Sbjct: 386 GLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGHPAVRPELDLVEQEDQLTHEI 445
Query: 1422 ALLEEIDPETSLDIFKPDPQFMENEKRYEELVKNILGDES--------NKXXXXXXXXXX 1267
+L E+IDPE +LDIFKPDPQF+E+EKRYEEL K ILG+ES
Sbjct: 446 SLEEKIDPEITLDIFKPDPQFLESEKRYEELKKTILGEESEDEAGSDAGSDDEDEDEDDD 505
Query: 1266 XXXXXXXXXXXXEKMQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEM 1087
++M+IKDETETNLVNLRRTIYLTIMSS+DFEEAGHKLLKIKLEPGQEM
Sbjct: 506 EDDDEDDDEEDEQQMKIKDETETNLVNLRRTIYLTIMSSIDFEEAGHKLLKIKLEPGQEM 565
Query: 1086 ELCIMLLECCSQERTYLRYYGLLGQRFCMINKIHQENFETCFVQQYSMIHRLETNKLRNV 907
ELCIMLLECCSQERTYLRYYGLLGQRFCMINK+HQENFE CFVQQYSMIHRLETNKLRNV
Sbjct: 566 ELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNV 625
Query: 906 AKFFAHLLGTDALPWNVLSYIRLTEEDTTSSSRIFIKILFQELSEQLGIRLLNERLTDPG 727
AKFFAHLLGTDALPW+VL+YIRLTEEDTTSSSRIFIKILFQELSE LGIRLLNERLTDP
Sbjct: 626 AKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPS 685
Query: 726 MQDSFESIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQ-TVAHSD 556
MQDSFESIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQ V+ SD
Sbjct: 686 MQDSFESIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQKPVSESD 743
>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
Length = 871
Score = 853 bits (2203), Expect = 0.0
Identities = 432/525 (82%), Positives = 463/525 (88%), Gaps = 2/525 (0%)
Frame = -2
Query: 2142 GIYIPPFKLAQMMRNVEDKSSVEYQRLTWDALRKSINGLVNKVNAANIKNIVTELFEENL 1963
G+YIPPFK+A MM+ V+DKSSVEYQRLTWDALRKSINGLVNKVNA NIKNI+ ELF ENL
Sbjct: 302 GVYIPPFKMAMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENL 361
Query: 1962 IRGRGLFCRSCMKSQMASPGFTDVFSALVAVVNTKFPEVGEXXXXXXXXXXXRAYKRHDK 1783
IRGRGLFCRSCMKSQMASPGFTDVF+ALVAVVNTKFPEVG+ RAYKR+DK
Sbjct: 362 IRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDK 421
Query: 1782 HQLLAAVKFVAHLVNQQVAHEIIAXXXXXXXLDDPSTDGVEVAVGFVTECGSLLQDLSPQ 1603
QLLAAVKF+AHLVNQQ AHEIIA L+ P+ D VEVAVGFVTECGS+LQDLSP+
Sbjct: 422 PQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTECGSILQDLSPK 481
Query: 1602 GLHGIFERFRGILHEGEIDKRVQFLIEGLFAVRKAKFQGHPAIRPELDLVDQEDQLTHEL 1423
GLHGIFERFRGILHEGEIDKRVQFLIEGLFA+RKAKFQG+PA+RPELDLV+QEDQ+THE+
Sbjct: 482 GLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEV 541
Query: 1422 ALLEEIDPETSLDIFKPDPQFMENEKRYEELVKNILGDES--NKXXXXXXXXXXXXXXXX 1249
+L EEIDPE SLDIFKPDP F+ENEKRYEEL K++LG+ES ++
Sbjct: 542 SLDEEIDPEISLDIFKPDPNFLENEKRYEELKKSMLGEESEDDEEGLDSESDDDDDEDDE 601
Query: 1248 XXXXXXEKMQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIML 1069
E+MQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIML
Sbjct: 602 SDEEEEEQMQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIML 661
Query: 1068 LECCSQERTYLRYYGLLGQRFCMINKIHQENFETCFVQQYSMIHRLETNKLRNVAKFFAH 889
LECCSQERTYLRYYGLLGQRFCMINK+HQENFE CFVQQYSMIHRLETNKLRNV KFFAH
Sbjct: 662 LECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVGKFFAH 721
Query: 888 LLGTDALPWNVLSYIRLTEEDTTSSSRIFIKILFQELSEQLGIRLLNERLTDPGMQDSFE 709
LLGTDALPW+VLSYIRLTEEDTTSSSRIFIKILFQELSE LGIRLLNERL DP MQ+SFE
Sbjct: 722 LLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPTMQESFE 781
Query: 708 SIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQ 574
SIFPKDNPKNTRF INFFTSIGLGG+TENLREYLKNMPRLIMQQQ
Sbjct: 782 SIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRLIMQQQ 826
>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
Length = 860
Score = 850 bits (2196), Expect = 0.0
Identities = 432/524 (82%), Positives = 462/524 (88%), Gaps = 1/524 (0%)
Frame = -2
Query: 2142 GIYIPPFKLAQMMRNVEDKSSVEYQRLTWDALRKSINGLVNKVNAANIKNIVTELFEENL 1963
G+YIPPFK+A MM+ V+DKSSVEYQRLTWDALRKSINGLVNKVNA NIKNI+ ELF ENL
Sbjct: 286 GVYIPPFKMAMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENL 345
Query: 1962 IRGRGLFCRSCMKSQMASPGFTDVFSALVAVVNTKFPEVGEXXXXXXXXXXXRAYKRHDK 1783
IRGRGLFCRSCMKSQMASPGFTDVF+ALVAVVNTKFPEVG+ RAYKR+DK
Sbjct: 346 IRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDK 405
Query: 1782 HQLLAAVKFVAHLVNQQVAHEIIAXXXXXXXLDDPSTDGVEVAVGFVTECGSLLQDLSPQ 1603
QLLAAVKF+AHLVNQQ AHEIIA L+ P+ D VEVAVGFVTECGS+LQDLSP+
Sbjct: 406 PQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTECGSILQDLSPK 465
Query: 1602 GLHGIFERFRGILHEGEIDKRVQFLIEGLFAVRKAKFQGHPAIRPELDLVDQEDQLTHEL 1423
GLHGIFERFRGILHEGEIDKRVQFLIEGLFA+RKAKFQG+PA+RPELDLV+QEDQ+THE+
Sbjct: 466 GLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEV 525
Query: 1422 ALLEEIDPETSLDIFKPDPQFMENEKRYEELVKNILGDES-NKXXXXXXXXXXXXXXXXX 1246
+L EEIDPE SLDIFKPDP F+ENEKRYEEL K++LG+ES +
Sbjct: 526 SLDEEIDPEISLDIFKPDPNFLENEKRYEELKKSMLGEESEDDEEGLDAESDDDDEDDDS 585
Query: 1245 XXXXXEKMQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLL 1066
E+MQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLL
Sbjct: 586 DEEDEEEMQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLL 645
Query: 1065 ECCSQERTYLRYYGLLGQRFCMINKIHQENFETCFVQQYSMIHRLETNKLRNVAKFFAHL 886
ECCSQERTYLRYYGLLGQRFCMINK+HQENFE CFVQQYSMIHRLETNKLRNVAKFFAHL
Sbjct: 646 ECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHL 705
Query: 885 LGTDALPWNVLSYIRLTEEDTTSSSRIFIKILFQELSEQLGIRLLNERLTDPGMQDSFES 706
LGTDALPW+VLSYIRLTEEDTTSSSRIFIKILFQELSE LGIRLLNERL D MQ+SFES
Sbjct: 706 LGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDLTMQESFES 765
Query: 705 IFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQ 574
IFPKDNPKNTRF INFFTSIGLGG+TENLREYLKNMPRLIMQQQ
Sbjct: 766 IFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRLIMQQQ 809
>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
Length = 797
Score = 849 bits (2193), Expect = 0.0
Identities = 431/534 (80%), Positives = 469/534 (87%), Gaps = 5/534 (0%)
Frame = -2
Query: 2142 GIYIPPFKLAQMMRNVEDKSSVEYQRLTWDALRKSINGLVNKVNAANIKNIVTELFEENL 1963
G+YIPPFKLA+MM+ V+DKSS+EYQRLTWDALRKSINGLVNKVNA NIKNI+ ELF ENL
Sbjct: 223 GVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENL 282
Query: 1962 IRGRGLFCRSCMKSQMASPGFTDVFSALVAVVNTKFPEVGEXXXXXXXXXXXRAYKRHDK 1783
IRGRGLFCRSCMKSQMASPGFTDVF+ALVAVVNTKFPEVG+ RAYKR+DK
Sbjct: 283 IRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDK 342
Query: 1782 HQLLAAVKFVAHLVNQQVAHEIIAXXXXXXXLDDPSTDGVEVAVGFVTECGSLLQDLSPQ 1603
QLLAAVKF+AHLVNQQVAHEIIA L++P+ D VEVAVGFVTECGS+L+DLSP+
Sbjct: 343 PQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPK 402
Query: 1602 GLHGIFERFRGILHEGEIDKRVQFLIEGLFAVRKAKFQGHPAIRPELDLVDQEDQLTHEL 1423
GLHGIFERFRGILHEGEIDKRVQFLIEGLFA+RKAKF+G+PA+RPELDLV+QEDQLTHE+
Sbjct: 403 GLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEI 462
Query: 1422 ALLEEIDPETSLDIFKPDPQFMENEKRYEELVKNILG----DESNKXXXXXXXXXXXXXX 1255
+L EEIDPE +LDIFK DP F+ENEKRYE+L KNILG DE ++
Sbjct: 463 SLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKNILGEESEDEEDRSDAGSDESEDEDEE 522
Query: 1254 XXXXXXXXEKMQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCI 1075
E+MQI DETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQE+ELC+
Sbjct: 523 DESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCV 582
Query: 1074 MLLECCSQERTYLRYYGLLGQRFCMINKIHQENFETCFVQQYSMIHRLETNKLRNVAKFF 895
MLLECCSQERTYLRYYGLLGQRFC INK++QENF+ CFVQQYSMIHRLETNKLRNVAKFF
Sbjct: 583 MLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFF 642
Query: 894 AHLLGTDALPWNVLSYIRLTEEDTTSSSRIFIKILFQELSEQLGIRLLNERLTDPGMQDS 715
AHLLGTDALPW+VLSYIRLTEEDTTSSSRIFIKILFQELSE LGIRLLNERLTDP MQDS
Sbjct: 643 AHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDS 702
Query: 714 FESIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQ-TVAHSD 556
FESIFP+DNPKNTRFSINFFTSIGLGG+TENLREYLKNMPRLIMQQQ V+ SD
Sbjct: 703 FESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSD 756
>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
homolog, partial [Cucumis sativus]
Length = 780
Score = 844 bits (2181), Expect = 0.0
Identities = 429/534 (80%), Positives = 467/534 (87%), Gaps = 5/534 (0%)
Frame = -2
Query: 2142 GIYIPPFKLAQMMRNVEDKSSVEYQRLTWDALRKSINGLVNKVNAANIKNIVTELFEENL 1963
G+YIPPFKLA+MM+ V+DKSS+EYQRLTWDALRKSINGLVNKVNA NIKNI+ ELF ENL
Sbjct: 223 GVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENL 282
Query: 1962 IRGRGLFCRSCMKSQMASPGFTDVFSALVAVVNTKFPEVGEXXXXXXXXXXXRAYKRHDK 1783
IRGRGLFCRSCMKSQMASPGFTDVF+ALVAVVNTKFPEVG+ RAYKR+DK
Sbjct: 283 IRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDK 342
Query: 1782 HQLLAAVKFVAHLVNQQVAHEIIAXXXXXXXLDDPSTDGVEVAVGFVTECGSLLQDLSPQ 1603
QLLAAVKF+AHLVNQQVAHEIIA L++P+ D VEVAVGFVTECGS+L+DLSP+
Sbjct: 343 PQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPK 402
Query: 1602 GLHGIFERFRGILHEGEIDKRVQFLIEGLFAVRKAKFQGHPAIRPELDLVDQEDQLTHEL 1423
GLHGIFERFRGILHEGEIDKRVQFLIEGLFA+RKAKF+G+PA+RPELDLV+QEDQLTHE+
Sbjct: 403 GLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEI 462
Query: 1422 ALLEEIDPETSLDIFKPDPQFMENEKRYEELVKNILG----DESNKXXXXXXXXXXXXXX 1255
+L EEIDPE +LDIFK DP F+ENEKRYE+L K ILG DE ++
Sbjct: 463 SLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKXILGEESEDEEDRSDAGSDESEDEDEE 522
Query: 1254 XXXXXXXXEKMQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCI 1075
E+MQI DETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQE+ELC+
Sbjct: 523 DESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCV 582
Query: 1074 MLLECCSQERTYLRYYGLLGQRFCMINKIHQENFETCFVQQYSMIHRLETNKLRNVAKFF 895
MLLECCSQERTYLRYYGLLGQRFC INK++QENF+ CFVQQYSMIHRLETNKLRNVAKFF
Sbjct: 583 MLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFF 642
Query: 894 AHLLGTDALPWNVLSYIRLTEEDTTSSSRIFIKILFQELSEQLGIRLLNERLTDPGMQDS 715
AHLLGTDALPW+VLSYIRLTEEDTTSSSRIFIKILFQELSE LGIRLLNERLTDP MQDS
Sbjct: 643 AHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDS 702
Query: 714 FESIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQ-TVAHSD 556
FESIFP+DNPKNTRFSINFFTSIGLGG+TENLREY KNMPRLIMQQQ V+ SD
Sbjct: 703 FESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYXKNMPRLIMQQQKPVSDSD 756