BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004460
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512920.1| ribosomal RNA methyltransferase, putative [R...   209   1e-51
ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltrans...   199   7e-49
ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltrans...   198   1e-48
ref|XP_002313039.1| predicted protein [Populus trichocarpa] gi|2...   196   9e-48
ref|XP_002280414.1| PREDICTED: adoMet-dependent rRNA methyltrans...   194   3e-47

>ref|XP_002512920.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
            gi|223547931|gb|EEF49423.1| ribosomal RNA
            methyltransferase, putative [Ricinus communis]
          Length = 828

 Score =  209 bits (531), Expect = 1e-51
 Identities = 107/185 (57%), Positives = 133/185 (71%), Gaps = 3/185 (1%)
 Frame = -3

Query: 912  QVDSEANPLVVPLHDEELPSQEQVTENWFSQEIFANSIEERKLEKNECDDDME-DIQEEN 736
            Q D E NPL+VP +D E+P+QE++T  WF+Q++FA ++E+  LEK + +D M+ D+QE  
Sbjct: 513  QGDEEVNPLMVPFNDGEVPTQEEITNKWFTQDVFAKAVEDGDLEKYDSEDQMQVDMQEGK 572

Query: 735  FPVLR-KCKNMLHHAKDSQKLGSKVDDFEIVPAPPTDDXXXXXXXXE-YDVDAKAEILAY 562
                + K K+ + H     +     +DFEIVPAP  D            DV+AKAEILAY
Sbjct: 573  VASPKNKAKDAIGHKHTQHQTSKGEEDFEIVPAPAMDSSDDSSSDDSDEDVEAKAEILAY 632

Query: 561  AKKMLLTKQREQTLDDAYNKYMFDDEGLPTWFLEEEKRHRQPIKPVTKEEIVAMKAQFKE 382
            AKKML  KQRE+ LDDAYNKYMFDDEGLP WF+EEE+RHRQPIKPVTKEEIVAM+AQFKE
Sbjct: 633  AKKMLRKKQREEMLDDAYNKYMFDDEGLPGWFVEEERRHRQPIKPVTKEEIVAMRAQFKE 692

Query: 381  INARP 367
            INARP
Sbjct: 693  INARP 697



 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 34/66 (51%), Positives = 39/66 (59%)
 Frame = -2

Query: 208 DETDISDRSKNKMINQLYKKAMPKKPKREYXXXXXXXXXXXXXXXXXVDPRMKKDTRTRG 29
           D+ +ISDRSK KMI QLYKKA PK+PK+EY                 VD RMKKD R  G
Sbjct: 728 DQAEISDRSKRKMIEQLYKKAQPKRPKKEYVVAKKGVANKAGKGKVLVDRRMKKDARVHG 787

Query: 28  MGRAGK 11
           M + GK
Sbjct: 788 MSKRGK 793


>ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like [Glycine
            max]
          Length = 834

 Score =  199 bits (507), Expect = 7e-49
 Identities = 107/192 (55%), Positives = 129/192 (67%), Gaps = 10/192 (5%)
 Frame = -3

Query: 912  QVDSEANPLVVPLHDEELPSQEQVTENWFSQEIFANSIEERKLEKNECDDDME-DIQEEN 736
            Q D EANPL+VPL+DE   +QE++   WFSQ++FA + EE   +K+E  D+M+ D  +E 
Sbjct: 519  QGDQEANPLMVPLNDEAELTQEEIMNKWFSQDVFAEAAEEGDFKKDESKDEMDIDEPKEK 578

Query: 735  FPVLRKCKN--------MLHHAKDSQKLGSKVDDFEIVPAPPTDDXXXXXXXXEY-DVDA 583
              + +K K           H      K G   DDFEIVPAP TD            D++A
Sbjct: 579  ISIAKKVKENKTAAPAVATHPQPQPSKAG---DDFEIVPAPDTDSSDDSSSDEWEEDIEA 635

Query: 582  KAEILAYAKKMLLTKQREQTLDDAYNKYMFDDEGLPTWFLEEEKRHRQPIKPVTKEEIVA 403
            KAEILAYAKKM+  KQRE  LDDAYNKYMFDDEGLP WFL+EE+RHRQPIKP+TKEEI A
Sbjct: 636  KAEILAYAKKMMRKKQREHLLDDAYNKYMFDDEGLPKWFLDEERRHRQPIKPITKEEIAA 695

Query: 402  MKAQFKEINARP 367
            MKAQFKEI+ARP
Sbjct: 696  MKAQFKEIDARP 707



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 33/66 (50%), Positives = 40/66 (60%)
 Frame = -2

Query: 208 DETDISDRSKNKMINQLYKKAMPKKPKREYXXXXXXXXXXXXXXXXXVDPRMKKDTRTRG 29
           D+T+ISDRSK K I QLYK+A+PK+PK+EY                 VD RMKKD R  G
Sbjct: 738 DQTEISDRSKRKQIEQLYKRAVPKRPKKEYVVAKKGVQVRAGKGKVLVDRRMKKDARKHG 797

Query: 28  MGRAGK 11
            G+ GK
Sbjct: 798 SGKGGK 803


>ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like [Glycine
            max]
          Length = 829

 Score =  198 bits (504), Expect = 1e-48
 Identities = 110/189 (58%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
 Frame = -3

Query: 912  QVDSEANPLVVPLHDEELPSQEQVTENWFSQEIFANSIEERKLEKNECDDDME-DIQEEN 736
            Q D EANPL+VPL+D    +QE+V   WFSQ++FA + EE   EK+E  D+M+ D  +E 
Sbjct: 517  QGDQEANPLMVPLNDGAELTQEEVMNKWFSQDVFAEAAEEGDFEKDESKDEMDIDEPKEK 576

Query: 735  FPVLRKCKNMLHHAK----DSQKLGSKV-DDFEIVPAPPTDDXXXXXXXXEY-DVDAKAE 574
              + +K K     A       Q   SK  DDFEIVPAP TD            D +AKAE
Sbjct: 577  ISIAKKVKENKTAAPAVVAHPQPQPSKAADDFEIVPAPDTDSSDDSSSDEWEEDTEAKAE 636

Query: 573  ILAYAKKMLLTKQREQTLDDAYNKYMFDDEGLPTWFLEEEKRHRQPIKPVTKEEIVAMKA 394
            ILAYAKKM+  KQREQ LDDAYNKYMFDDEGLP WFL+EE+RHRQPIKP+TKEEI AMKA
Sbjct: 637  ILAYAKKMMRKKQREQMLDDAYNKYMFDDEGLPKWFLDEERRHRQPIKPITKEEIAAMKA 696

Query: 393  QFKEINARP 367
            QFKEI+ARP
Sbjct: 697  QFKEIDARP 705



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 34/66 (51%), Positives = 41/66 (62%)
 Frame = -2

Query: 208 DETDISDRSKNKMINQLYKKAMPKKPKREYXXXXXXXXXXXXXXXXXVDPRMKKDTRTRG 29
           D+T+ISD SK K I QLYK+A+PK+PK+EY                 VD RMKKD R  G
Sbjct: 736 DQTEISDSSKRKQIEQLYKRAVPKRPKKEYVVAKKGVQVRAGKGKVLVDRRMKKDARKHG 795

Query: 28  MGRAGK 11
           MG+AGK
Sbjct: 796 MGKAGK 801


>ref|XP_002313039.1| predicted protein [Populus trichocarpa] gi|222849447|gb|EEE86994.1|
            predicted protein [Populus trichocarpa]
          Length = 840

 Score =  196 bits (497), Expect = 9e-48
 Identities = 108/192 (56%), Positives = 131/192 (68%), Gaps = 12/192 (6%)
 Frame = -3

Query: 906  DSEANPLVVPLHDEELPSQEQVTENWFSQEIFANSIEE--------RKLEKNECDDDM-E 754
            D EANPL+VP +D E+P++E++T  WF Q+IFA + E+        R LEK E +D+M  
Sbjct: 518  DHEANPLMVPFNDGEVPTEEEITRKWFDQDIFAKAAEDGDLETAEARNLEKYESEDEMLV 577

Query: 753  DIQEENFPVLRK-CKNMLHHAKDSQKLGSKVDDFEIVPAPPTD--DXXXXXXXXEYDVDA 583
            D QE+     +K  KN     +      +  +DFEIVPAP TD  D        + DVD+
Sbjct: 578  DGQEKEIATPKKSAKNAAGSDRTQPPSSTAENDFEIVPAPATDSSDDSSSDESEDDDVDS 637

Query: 582  KAEILAYAKKMLLTKQREQTLDDAYNKYMFDDEGLPTWFLEEEKRHRQPIKPVTKEEIVA 403
            KAEILA AKKML  K+REQ LDD+YNKYMFDDEGLP WF+EEEKRH QPIKPVTKEEI A
Sbjct: 638  KAEILACAKKMLRKKRREQMLDDSYNKYMFDDEGLPGWFVEEEKRHCQPIKPVTKEEIAA 697

Query: 402  MKAQFKEINARP 367
            M+AQFKEINARP
Sbjct: 698  MRAQFKEINARP 709



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 33/68 (48%), Positives = 40/68 (58%)
 Frame = -2

Query: 205 ETDISDRSKNKMINQLYKKAMPKKPKREYXXXXXXXXXXXXXXXXXVDPRMKKDTRTRGM 26
           +T+ISD SK ++I QLYKKA PK+PK+EY                 VD RMKKD   RGM
Sbjct: 741 QTEISDHSKGRLIEQLYKKAAPKRPKKEYVVAKKGVTVKVGKGKVLVDRRMKKD--ARGM 798

Query: 25  GRAGKCSL 2
           G+ GK  L
Sbjct: 799 GKPGKGGL 806


>ref|XP_002280414.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1 [Vitis
            vinifera]
          Length = 842

 Score =  194 bits (493), Expect = 3e-47
 Identities = 107/192 (55%), Positives = 134/192 (69%), Gaps = 10/192 (5%)
 Frame = -3

Query: 912  QVDSEANPLVVPLHDEELPSQEQVTENWFSQEIFANSIEERKLEKNECDDDME-DIQEEN 736
            Q D EANPL+VPLH EE+P+Q ++T+ WFSQ+IFA + EE  L K+E +D+ME D QE+ 
Sbjct: 513  QADLEANPLMVPLHGEEMPTQREITDKWFSQDIFAEAAEEGDLGKHESEDEMEVDRQEKT 572

Query: 735  FPVLRKCKNMLHHAKDSQKLG------SKVD-DFEIVPAPPTD--DXXXXXXXXEYDVDA 583
              + +K K   + A+   ++       SK + DFEIVPAP TD  D        + D+ A
Sbjct: 573  LSIPKKAKE--NKARKPSEINPPQIEASKAEEDFEIVPAPSTDSSDDSSSDESDDEDIHA 630

Query: 582  KAEILAYAKKMLLTKQREQTLDDAYNKYMFDDEGLPTWFLEEEKRHRQPIKPVTKEEIVA 403
            KAEILA AKKML  K+RE+ LDDAYNKYMF D+GLP WF +EE RH Q IKPVTKEEI A
Sbjct: 631  KAEILACAKKMLRKKERERILDDAYNKYMFHDKGLPQWFADEEARHCQTIKPVTKEEIAA 690

Query: 402  MKAQFKEINARP 367
            M+AQFKEI+ARP
Sbjct: 691  MRAQFKEIDARP 702



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 34/66 (51%), Positives = 42/66 (63%)
 Frame = -2

Query: 208 DETDISDRSKNKMINQLYKKAMPKKPKREYXXXXXXXXXXXXXXXXXVDPRMKKDTRTRG 29
           D+TDISDRSK ++I QLYKKA PK+P++EY                 VD RMKKD R+RG
Sbjct: 733 DQTDISDRSKGRLIEQLYKKAAPKRPQKEYVVAKKGVQVRAGKGKVLVDRRMKKDARSRG 792

Query: 28  MGRAGK 11
           M + GK
Sbjct: 793 MSKQGK 798