BLASTX nr result

ID: Cimicifuga21_contig00004457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004457
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323098.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
emb|CBI15799.3| unnamed protein product [Vitis vinifera]               96   4e-18
ref|XP_002276020.1| PREDICTED: probable LRR receptor-like serine...    96   4e-18
ref|XP_002533344.1| protein with unknown function [Ricinus commu...    91   1e-16
ref|XP_002870890.1| ATP binding protein [Arabidopsis lyrata subs...    90   2e-16

>ref|XP_002323098.1| predicted protein [Populus trichocarpa] gi|222867728|gb|EEF04859.1|
           predicted protein [Populus trichocarpa]
          Length = 959

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/86 (52%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
 Frame = +1

Query: 82  SFCYDV---GAQITMPTEVGALQAIRRSLKDPMKYMRNWDKGDPCISNWTGVFCFNTTQN 252
           S+CY +    AQ+T P+EV AL A++ +L DPMK + NW+KGDPC SNWTGVFC++ T  
Sbjct: 14  SYCYLLLLTVAQVTNPSEVNALLAVKNNLIDPMKQLSNWNKGDPCTSNWTGVFCYDATGT 73

Query: 253 DGYLHVREXXXXXXXXXXXXXPELGK 330
           DGYLHVRE             PELG+
Sbjct: 74  DGYLHVRELYLLNLNLSGNLAPELGQ 99


>emb|CBI15799.3| unnamed protein product [Vitis vinifera]
          Length = 960

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/83 (51%), Positives = 53/83 (63%)
 Frame = +1

Query: 103 AQITMPTEVGALQAIRRSLKDPMKYMRNWDKGDPCISNWTGVFCFNTTQNDGYLHVREXX 282
           A +T P EV AL+AI+ SL+DPM  + NW++GDPC S WTGV CFNTT ND YLHV+E  
Sbjct: 36  ATVTDPVEVTALRAIKESLEDPMNNLTNWNRGDPCTSEWTGVLCFNTTMNDSYLHVKELQ 95

Query: 283 XXXXXXXXXXXPELGKFVYENIV 351
                      PELG+  Y  I+
Sbjct: 96  LLNMHLSGTLSPELGRLSYMQIL 118


>ref|XP_002276020.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g06840-like [Vitis vinifera]
          Length = 959

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/83 (51%), Positives = 53/83 (63%)
 Frame = +1

Query: 103 AQITMPTEVGALQAIRRSLKDPMKYMRNWDKGDPCISNWTGVFCFNTTQNDGYLHVREXX 282
           A +T P EV AL+AI+ SL+DPM  + NW++GDPC S WTGV CFNTT ND YLHV+E  
Sbjct: 36  ATVTDPVEVTALRAIKESLEDPMNNLTNWNRGDPCTSEWTGVLCFNTTMNDSYLHVKELQ 95

Query: 283 XXXXXXXXXXXPELGKFVYENIV 351
                      PELG+  Y  I+
Sbjct: 96  LLNMHLSGTLSPELGRLSYMQIL 118


>ref|XP_002533344.1| protein with unknown function [Ricinus communis]
           gi|223526824|gb|EEF29043.1| protein with unknown
           function [Ricinus communis]
          Length = 844

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
 Frame = +1

Query: 97  VGAQ--ITMPTEVGALQAIRRSLKDPMKYMRNWDKGDPCISNWTGVFCFNTTQNDGYLHV 270
           +GAQ  IT P EV AL+ +++SL D  K + NW++GDPC SNWTGV CFN T +DGYLHV
Sbjct: 24  IGAQDAITSPIEVKALREVKKSLVDINKNLSNWNRGDPCTSNWTGVLCFNATMDDGYLHV 83

Query: 271 REXXXXXXXXXXXXXPELGKFVYENIV 351
           RE             P LG F Y  I+
Sbjct: 84  RELQLLNMNLSGTLSPSLGLFSYMKIL 110


>ref|XP_002870890.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316727|gb|EFH47149.1| ATP binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 951

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/83 (50%), Positives = 52/83 (62%)
 Frame = +1

Query: 103 AQITMPTEVGALQAIRRSLKDPMKYMRNWDKGDPCISNWTGVFCFNTTQNDGYLHVREXX 282
           AQ T P+EV AL++++RSL DP  Y+RNW++GDPC SNWTGV CFN    D YLHVRE  
Sbjct: 25  AQRTHPSEVSALRSVKRSLIDPKDYLRNWNRGDPCRSNWTGVICFNEIGTDDYLHVRELL 84

Query: 283 XXXXXXXXXXXPELGKFVYENIV 351
                      PEL K  +  I+
Sbjct: 85  LMNMNLSGSLSPELRKLAHLEIL 107


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