BLASTX nr result

ID: Cimicifuga21_contig00004456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004456
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83419.1| hypothetical protein VITISV_024323 [Vitis vinifera]   282   9e-74
ref|XP_002264265.1| PREDICTED: selT-like protein [Vitis vinifera...   282   1e-73
gb|ADN33788.1| selenoprotein t precursor [Cucumis melo subsp. me...   262   9e-68
ref|XP_002314095.1| predicted protein [Populus trichocarpa] gi|1...   261   3e-67
ref|XP_004171817.1| PREDICTED: selT-like protein-like [Cucumis s...   256   5e-66

>emb|CAN83419.1| hypothetical protein VITISV_024323 [Vitis vinifera]
          Length = 232

 Score =  282 bits (722), Expect = 9e-74
 Identities = 143/231 (61%), Positives = 172/231 (74%), Gaps = 3/231 (1%)
 Frame = -1

Query: 1024 MDRVQILLLGLPIFLFCSDILNIFTXXXXXXXXXXXXXXXXXPLVQ---QQQPLDFPTQI 854
            MDR Q+LL+GLP+FLF SDI+N+FT                    Q   Q  PLDFPTQ 
Sbjct: 1    MDRAQLLLVGLPLFLFFSDIINLFTPPPPKPPPHHHHHHHHHQQPQPKPQSAPLDFPTQ- 59

Query: 853  QKXXXXXXXXXXXXXXNFCSSCSYRGNAETMKKMLETSFPGIDVILANYPPPLPKRLLSK 674
            ++              NFCSSCSYRGNA TMK MLE+ FPG+ V+LANYPPPLPKRLLSK
Sbjct: 60   KESGIGGIGFGNTVNINFCSSCSYRGNAVTMKNMLESQFPGVTVVLANYPPPLPKRLLSK 119

Query: 673  VIPVFQIGVMGIVMAGEQIFPRLGYMTPPPWYFSMRQNRFGTIATAWLLGNVMQSFLQSS 494
            V+PV QIGV+GIVMAGEQIFPRLG++ PPPWY+S+R NRFGTI+T WLLGN +QSFLQSS
Sbjct: 120  VVPVVQIGVIGIVMAGEQIFPRLGFIAPPPWYYSLRANRFGTISTTWLLGNFLQSFLQSS 179

Query: 493  GAFEVYCNDELVFSKLKEQRFPAEVELRELITRKFSSSRVVDGL*ADGLWS 341
            GAFEVYCN ELVFSKLK+QRFP E+EL++L+ ++  +SR+VD + A G+WS
Sbjct: 180  GAFEVYCNGELVFSKLKQQRFPGEIELKDLVGQRLVASRIVDDVGA-GVWS 229


>ref|XP_002264265.1| PREDICTED: selT-like protein [Vitis vinifera]
            gi|296083168|emb|CBI22804.3| unnamed protein product
            [Vitis vinifera]
          Length = 227

 Score =  282 bits (721), Expect = 1e-73
 Identities = 142/228 (62%), Positives = 171/228 (75%)
 Frame = -1

Query: 1024 MDRVQILLLGLPIFLFCSDILNIFTXXXXXXXXXXXXXXXXXPLVQQQQPLDFPTQIQKX 845
            MDR Q+LL+GLP+FLF SDI+N+FT                     Q  PLDFPTQ ++ 
Sbjct: 1    MDRAQLLLVGLPLFLFFSDIINLFTPPPPKPPPHHHHQQPQPK--PQSAPLDFPTQ-KES 57

Query: 844  XXXXXXXXXXXXXNFCSSCSYRGNAETMKKMLETSFPGIDVILANYPPPLPKRLLSKVIP 665
                         NFCSSCSYRGNA TMK MLE+ FPG+ V+LANYPPPLPKRLLSKV+P
Sbjct: 58   GIGGIGFGNTVNINFCSSCSYRGNAVTMKNMLESQFPGVTVVLANYPPPLPKRLLSKVVP 117

Query: 664  VFQIGVMGIVMAGEQIFPRLGYMTPPPWYFSMRQNRFGTIATAWLLGNVMQSFLQSSGAF 485
            V QIGV+GIVMAGEQIFPRLG++ PPPWY+S+R NRFGTI+T WLLGN +QSFLQSSGAF
Sbjct: 118  VVQIGVIGIVMAGEQIFPRLGFIAPPPWYYSLRANRFGTISTTWLLGNFLQSFLQSSGAF 177

Query: 484  EVYCNDELVFSKLKEQRFPAEVELRELITRKFSSSRVVDGL*ADGLWS 341
            EVYCN ELVFSKLK+QRFP E+EL++L+ ++  +SR+VD + A G+WS
Sbjct: 178  EVYCNGELVFSKLKQQRFPGEIELKDLVGQRLVASRIVDDVGA-GVWS 224


>gb|ADN33788.1| selenoprotein t precursor [Cucumis melo subsp. melo]
            gi|307136469|gb|ADN34273.1| selenoprotein t [Cucumis melo
            subsp. melo]
          Length = 227

 Score =  262 bits (670), Expect = 9e-68
 Identities = 136/231 (58%), Positives = 164/231 (70%), Gaps = 3/231 (1%)
 Frame = -1

Query: 1024 MDRVQILLLGLPIFLFCSDILNIFTXXXXXXXXXXXXXXXXXPLVQQ---QQPLDFPTQI 854
            MDR +I+LLGLPIFL  +DI+N+FT                     Q   Q+PL+FPT+ 
Sbjct: 1    MDRTRIVLLGLPIFLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQSVIQEPLEFPTE- 59

Query: 853  QKXXXXXXXXXXXXXXNFCSSCSYRGNAETMKKMLETSFPGIDVILANYPPPLPKRLLSK 674
            ++              NFC SCSYRG A  MK MLE+SFPG++VILANYPPP PKRLLSK
Sbjct: 60   KRSVIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPFPKRLLSK 119

Query: 673  VIPVFQIGVMGIVMAGEQIFPRLGYMTPPPWYFSMRQNRFGTIATAWLLGNVMQSFLQSS 494
            V+PV Q G++GI++AGE IFPRLG M PPPWY+S+R NRFG+IA+ WL GN +QSFLQSS
Sbjct: 120  VVPVVQFGIIGIIVAGEHIFPRLG-MVPPPWYYSLRANRFGSIASTWLFGNFVQSFLQSS 178

Query: 493  GAFEVYCNDELVFSKLKEQRFPAEVELRELITRKFSSSRVVDGL*ADGLWS 341
            GAFEVYCN E+VFSKLKEQRFP E+ELR+LI RK S SR VD   + G+WS
Sbjct: 179  GAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDN--SGGVWS 227


>ref|XP_002314095.1| predicted protein [Populus trichocarpa] gi|118482112|gb|ABK92987.1|
            unknown [Populus trichocarpa] gi|222850503|gb|EEE88050.1|
            predicted protein [Populus trichocarpa]
          Length = 225

 Score =  261 bits (666), Expect = 3e-67
 Identities = 129/226 (57%), Positives = 162/226 (71%), Gaps = 5/226 (2%)
 Frame = -1

Query: 1024 MDRVQILLLGLPIFLFCSDILNIFTXXXXXXXXXXXXXXXXXPLVQQ-----QQPLDFPT 860
            MDR QILL+GLP+FL C+D++++FT                    +Q      + L  PT
Sbjct: 1    MDRAQILLVGLPLFLLCTDLIHLFTPPPPKPPPHHHHHPHPHHHHKQPPVGAHETLGSPT 60

Query: 859  QIQKXXXXXXXXXXXXXXNFCSSCSYRGNAETMKKMLETSFPGIDVILANYPPPLPKRLL 680
            Q  K              +FC+SCSYRGNA TMKKMLET FPGIDV+L NYPP LPKR+ 
Sbjct: 61   Q--KPVVGGIGLGSTVRIDFCASCSYRGNAVTMKKMLETQFPGIDVVLVNYPPSLPKRVA 118

Query: 679  SKVIPVFQIGVMGIVMAGEQIFPRLGYMTPPPWYFSMRQNRFGTIATAWLLGNVMQSFLQ 500
            +K++PVFQIGVMGIV+ GEQIFP LG MTPPPWY+S+R N+FGTIA+ WLLGN ++SFLQ
Sbjct: 119  AKLVPVFQIGVMGIVLGGEQIFPMLGLMTPPPWYYSLRANKFGTIASTWLLGNALRSFLQ 178

Query: 499  SSGAFEVYCNDELVFSKLKEQRFPAEVELRELITRKFSSSRVVDGL 362
            SSGAFEVYCNDELVFSKL+E+RFP E+EL++L+ R+ ++S + D L
Sbjct: 179  SSGAFEVYCNDELVFSKLREERFPGEIELKDLVGRRLANSGISDML 224


>ref|XP_004171817.1| PREDICTED: selT-like protein-like [Cucumis sativus]
          Length = 227

 Score =  256 bits (655), Expect = 5e-66
 Identities = 134/231 (58%), Positives = 161/231 (69%), Gaps = 3/231 (1%)
 Frame = -1

Query: 1024 MDRVQILLLGLPIFLFCSDILNIFTXXXXXXXXXXXXXXXXXPLVQQ---QQPLDFPTQI 854
            MDR Q++LLGLPI L  +DI+N+FT                     Q   Q+P +FPT+ 
Sbjct: 1    MDRTQMVLLGLPILLLFTDIVNLFTPPPPKPAANHPPPRVHYQPKSQPVIQEPPEFPTE- 59

Query: 853  QKXXXXXXXXXXXXXXNFCSSCSYRGNAETMKKMLETSFPGIDVILANYPPPLPKRLLSK 674
            ++              NFC SCSYR  A TMK MLE+SFPG++VILANYPPPLPKRLLSK
Sbjct: 60   KRSVIGGIGQGSIININFCVSCSYRSTAITMKNMLESSFPGVEVILANYPPPLPKRLLSK 119

Query: 673  VIPVFQIGVMGIVMAGEQIFPRLGYMTPPPWYFSMRQNRFGTIATAWLLGNVMQSFLQSS 494
            V+P  Q G++GI+MAGE IFPRLG M PPPWY+S+R NRFG+IA+ WL GN +QSFLQSS
Sbjct: 120  VVPAVQFGIIGIIMAGEHIFPRLG-MVPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSS 178

Query: 493  GAFEVYCNDELVFSKLKEQRFPAEVELRELITRKFSSSRVVDGL*ADGLWS 341
            GAFEVYCN E+VFSKLKEQRFP E+ELR+LI RK S  R VD   + G+WS
Sbjct: 179  GAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGLRFVDN--SGGVWS 227


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