BLASTX nr result

ID: Cimicifuga21_contig00004455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004455
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512224.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_002319067.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002512224.1| conserved hypothetical protein [Ricinus communis]
           gi|223548185|gb|EEF49676.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 204

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/60 (51%), Positives = 42/60 (70%)
 Frame = -2

Query: 413 FPCFSDCVIGSDCTSLGITLSNDSAVSTPNSPNSNYASSIMPTSFLWLIVLIVSLAMAPR 234
           FPC+S C IGSDC SLGI +SN     + +SP +N ASSI+P  F W+I+++VS+ M  R
Sbjct: 149 FPCYSPCTIGSDCASLGIKVSN-----SESSPGTNPASSILPGKFRWMIIVLVSILMVLR 203


>ref|XP_002319067.1| predicted protein [Populus trichocarpa] gi|222857443|gb|EEE94990.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/58 (37%), Positives = 37/58 (63%)
 Frame = -2

Query: 413 FPCFSDCVIGSDCTSLGITLSNDSAVSTPNSPNSNYASSIMPTSFLWLIVLIVSLAMA 240
           +PC+  C +GSDC  + I ++N ++  +      N AS+I+P  F W+I+L+VS+ MA
Sbjct: 153 YPCYGACTLGSDCADI-IRIANSTSTGSGTGTGGNPASTILPAKFQWMIILLVSMLMA 209


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