BLASTX nr result
ID: Cimicifuga21_contig00004448
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00004448
(1907 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2... 110 1e-21
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2... 107 1e-20
ref|NP_001168550.1| uncharacterized protein LOC100382330 [Zea ma... 101 6e-19
ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LR... 94 1e-16
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 94 1e-16
>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
predicted protein [Populus trichocarpa]
Length = 505
Score = 110 bits (276), Expect = 1e-21
Identities = 102/421 (24%), Positives = 171/421 (40%), Gaps = 6/421 (1%)
Frame = -2
Query: 1615 IDYFSRLPDSVLAHIFYFLPMKETISTCILSKSLSRLWTSISNFEFTDFVGVRSSEKAR- 1439
+D S LP VL I LP+++ + T L + W+ I + F D G+ S + +
Sbjct: 94 LDRISSLPGHVLGQILSLLPIRDAVRTSALKRKWRYKWSQIPHIVF-DSQGISISSQDQT 152
Query: 1438 ----KIVEIFNKILEHRYGPIRSCRLALSYGCYISHVGRWVSLLIQNGVEEXXXXXXXXD 1271
K+V I + IL GPI +L+ +S + RW+ L + +E
Sbjct: 153 TIKNKLVNIIDHILLLHNGPIYKFKLSHCDLLAVSDIDRWILHLSRGSTKEFVLEIWKGQ 212
Query: 1270 YAHFKLPSCVXXXXXXXXXXXXXXXXRPPPGFTGLGALETLVIRHANLSEDLIRSLLSQC 1091
+KLPSC+ +PP F G L+ L ++H L++++ L+S C
Sbjct: 213 --QYKLPSCLFSFKNLVYLELFNCLLKPPLAFKGFRNLKNLDLQHVTLAQEVFEKLISSC 270
Query: 1090 NLLRSLTLQNCFNFGKLEISGCNTLLESLTVENCASHVEVDAPYVKNLCFRGEKTRFSIK 911
+L LTL N F L I+ N L+ V V + +V L G ++K
Sbjct: 271 AMLERLTLINFDGFTHLNINAPN--LQFFDVGGVFDDVSFENTFVLALVSIG--LYVNVK 326
Query: 910 GASNAINVDISRNARFHVNDQEGXXXXXXXXXXXLDVQSLSLTGWAFKCFAAGHLPEAMH 731
N S+ RF VN V+ L + + K A G +P +
Sbjct: 327 NDQNVSYGSSSKLLRFFVN--------------LPHVRRLEIQSYFLKYLAIGKVPSKLP 372
Query: 730 SSYLRIKKLELEISSSNVKELEGLVYLFRSCQNAESL-VLWINEDMADENEYRDXXXXXX 554
+ + L + ++ ++ +E L RSC N + + +L E+ A D
Sbjct: 373 KPCIDLNYLSIRLNFNDYEENSAAFCLLRSCPNLQEIEILARPEEQAVVGPVTDFWDDDH 432
Query: 553 XXXXXELDGSFLLYGCLRDSMQWIEINNFTGLDCEVQLVKFLVSNTRGLRAMTINPINIM 374
+ CL ++ ++I +G+ E+ +KFL+SN+ L MTI P++
Sbjct: 433 -------------WKCLFGQLRLVKIVGISGIRSELDCIKFLLSNSPVLEKMTIKPVSNE 479
Query: 373 G 371
G
Sbjct: 480 G 480
>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
predicted protein [Populus trichocarpa]
Length = 416
Score = 107 bits (267), Expect = 1e-20
Identities = 95/420 (22%), Positives = 172/420 (40%), Gaps = 5/420 (1%)
Frame = -2
Query: 1615 IDYFSRLPDSVLAHIFYFLPMKETISTCILSKSLSRLWTSISNFEF-TDFVGVRSSEKA- 1442
+D S LP VL I LP+++ + T LS+ W+ I + F T + S ++
Sbjct: 5 LDRISSLPGHVLDQILSVLPIRDAVRTSALSRKWRYQWSQIPHLVFDTQCASITSQDQTI 64
Query: 1441 --RKIVEIFNKILEHRYGPIRSCRLALSYGCYISHVGRWVSLLIQNGVEEXXXXXXXXDY 1268
+V I + +L GPI +L+ +S + RW+ L + +E
Sbjct: 65 AKNNLVNIIDNVLLLHNGPIYKFKLSHRDLLGVSDIDRWILHLSRGSTKEFVLEIWKGQ- 123
Query: 1267 AHFKLPSCVXXXXXXXXXXXXXXXXRPPPGFTGLGALETLVIRHANLSEDLIRSLLSQCN 1088
+KLPSC+ +PPP F G L++L ++H L++++ +L+S C
Sbjct: 124 -RYKLPSCLFSFENLTHLELFNCLLKPPPAFKGFRNLKSLDLQHVTLAQEVFENLISSCA 182
Query: 1087 LLRSLTLQNCFNFGKLEISGCNTLLESLTVENCASHVEVDAPYVKNLCFRGEKTRFSIKG 908
LL LTL N F L+I+ N L+ + V + L G ++K
Sbjct: 183 LLERLTLMNFDGFTHLKINAPN--LQFFDIGGIFDDVSFHNTSLLTLVSIG--LYANVKN 238
Query: 907 ASNAINVDISRNARFHVNDQEGXXXXXXXXXXXLDVQSLSLTGWAFKCFAAGHLPEAMHS 728
+ S+ RF VN ++ L + + K A +P +
Sbjct: 239 DRHVSRGSSSKLLRFFVN--------------LPHLRRLEIQSYFIKYLAISKVPSRLPK 284
Query: 727 SYLRIKKLELEISSSNVKELEGLVYLFRSCQNAESL-VLWINEDMADENEYRDXXXXXXX 551
+ + + + I+ ++ +E + + +SC N + + +L E+ AD
Sbjct: 285 PCMDLNYISIRINFNDFEENSAALCILKSCPNLQEIEMLGRPEEQADVEPQTGFWGDDQ- 343
Query: 550 XXXXELDGSFLLYGCLRDSMQWIEINNFTGLDCEVQLVKFLVSNTRGLRAMTINPINIMG 371
+ CL ++ ++I +G+ E+ +KFL+SN+ L MT+ P +I G
Sbjct: 344 ------------WKCLFGQLRLVKIVGISGIRSELDCIKFLLSNSPVLEQMTVKPASIEG 391
>ref|NP_001168550.1| uncharacterized protein LOC100382330 [Zea mays]
gi|223949101|gb|ACN28634.1| unknown [Zea mays]
gi|413945364|gb|AFW78013.1| hypothetical protein
ZEAMMB73_494429 [Zea mays]
Length = 424
Score = 101 bits (252), Expect = 6e-19
Identities = 101/422 (23%), Positives = 167/422 (39%), Gaps = 9/422 (2%)
Frame = -2
Query: 1618 NIDYFSRLPDSVLAHIFYFLPMKETISTCILSKSLSRLWTSISNFEF--TDFVGVRSSE- 1448
N+D S LPD + I LP+KE + TC+LS+ W S++ F DF +E
Sbjct: 16 NVDIISNLPDVIKDKILCCLPIKEAVRTCLLSRKWRYTWASMTELMFREDDFALGNGNED 75
Query: 1447 -KARKIVEIFNKILEHRYGPIRSCRLALSYGCYIS---HVGRWVSLLIQNGVEEXXXXXX 1280
+ + V L GPI + S H+ RW+ +L +NG++E
Sbjct: 76 GDSDRFVYFVITFLSLHDGPILKFEMNARRVHMFSPGGHIHRWMLMLSRNGIKE--IQIK 133
Query: 1279 XXDYAHFKLPSCVXXXXXXXXXXXXXXXXRPPPGFTGLGALETLVIRHANLSEDLIRSLL 1100
+ ++K+PS + PP F G + TL +E+ I L+
Sbjct: 134 TRIWRNYKIPSSFFSCVELEYACLQGCIFQLPPLFAGFKRMRTLHFVEFCATENNIGELV 193
Query: 1099 SQCNLLRSLTLQNCFNFGKLEISGCNTLLESLTVENCASHVEVDAPYVKNLCFRGEKTRF 920
+ C L L L +F + I +T L+ L V+ H+ + P+V + +
Sbjct: 194 ASCPNLEELILSRLLSFADITIH--STKLKVLRVDGMFKHLNLVTPHVSSAVINLQVNTG 251
Query: 919 SIKGASNAINVDISRNARFHVNDQEGXXXXXXXXXXXLDVQSLSLTGWAFKCFAAGHLPE 740
+K A + N+ LD++++SL G AF+C A G +P
Sbjct: 252 YVKRAGSNFNLS-------------------QFIGSLLDIENISLLGHAFECAAHGIVPG 292
Query: 739 AMHSSYLRIKKLELEISSSNVKELEGLVYLFRSCQNAESLVLWINED--MADENEYRDXX 566
+ S R+ ++ LE+ N+KE LF+ N + L + A + + D
Sbjct: 293 KLPRSLNRLTEITLELDLGNLKEANAAHCLFQIAPNLRRMELQLMHRGYSAPTSSFWD-- 350
Query: 565 XXXXXXXXXELDGSFLLYGCLRDSMQWIEINNFTGLDCEVQLVKFLVSNTRGLRAMTINP 386
S CL ++ + +NNFTG E +K L+ + LR+ I
Sbjct: 351 -------------SVDRQDCLFKNLYTVVMNNFTGSCAESGFLKLLLDDAPVLRSARIED 397
Query: 385 IN 380
N
Sbjct: 398 NN 399
>ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein
At1g13570-like [Cucumis sativus]
Length = 418
Score = 94.4 bits (233), Expect = 1e-16
Identities = 97/422 (22%), Positives = 175/422 (41%), Gaps = 8/422 (1%)
Frame = -2
Query: 1627 DNRNIDYFSRLPDSVLAHIFYFLPMKETISTCILSKSLSRLWTSISNFEF-TDFVGVRSS 1451
D +D+ S LP S++ I LP+++ I T ILS+ WT+++ F D V + +
Sbjct: 3 DVLGVDHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRYKWTTLTQLVFDDDCVAMSND 62
Query: 1450 EKARKIVEIFNKILEHRYGPIRSCRLALSYGCYISHVGRWVSLLIQNGVEEXXXXXXXXD 1271
++ +L GPI L+ +Y + +W+ L + G+ E +
Sbjct: 63 GIYEDLIYFITHVLXLHEGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIELGDGE 122
Query: 1270 YAHFKLPSCVXXXXXXXXXXXXXXXXRPPPGFTGLGALETLVIRHANLSEDLIRSLLSQC 1091
+ F++ SC+ PPP F G L++L + ++ + I SL+S C
Sbjct: 123 W--FRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLISNC 180
Query: 1090 NLLRSLTLQNCFNFGKLEISGCNTLLESLTVENCASHVEVDAPYVKNLCFRGEKTRFSIK 911
LL SL L + +SL + C AP +K L GE ++
Sbjct: 181 PLLESLAL---------------SYFDSLVLNIC-------APNLKYLYLEGEFRDICLQ 218
Query: 910 GASNAINVDISRNARFHVNDQE---GXXXXXXXXXXXLDVQSL-SLTGWAF--KCFAAGH 749
+++ ++ ++ND+ G V L LTG + K + G+
Sbjct: 219 NTPLLVSISVA----LYMNDESEPFGDLSDCNYEKFLGGVPYLEKLTGHVYFTKYLSIGN 274
Query: 748 LPEAMHSSYLRIKKLEL-EISSSNVKELEGLVYLFRSCQNAESLVLWINEDMADENEYRD 572
M SY+ +K +EL ++S ++ E+ ++ L S N E L + + + +E D
Sbjct: 275 SARKMPISYIYLKSIELHQVSFEDMNEILVVLRLITSSPNLEELQISGSSNPVAASEAPD 334
Query: 571 XXXXXXXXXXXELDGSFLLYGCLRDSMQWIEINNFTGLDCEVQLVKFLVSNTRGLRAMTI 392
S L +G LR ++ + +G+ E++ +K+L+ N L M+I
Sbjct: 335 LDFWENECP------SNLTFGKLR----VVKATDMSGVPHEMEFIKYLLRNCPVLEIMSI 384
Query: 391 NP 386
P
Sbjct: 385 RP 386
>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine max]
Length = 427
Score = 94.0 bits (232), Expect = 1e-16
Identities = 89/421 (21%), Positives = 164/421 (38%), Gaps = 7/421 (1%)
Frame = -2
Query: 1612 DYFSRLPDSVLAHIFYFLPMKETISTCILSKSLSRLWTSISNFEF-TDFVGVRSSEKA-- 1442
D S LP V+ + L ++E + T +LS W ++ F T V V S +
Sbjct: 17 DRISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILVFDTHCVSVASQDHMII 76
Query: 1441 -RKIVEIFNKILEHRYGPIRSCRLALSYGCYISHVGRWVSLLIQNGVEEXXXXXXXXDYA 1265
K++ I + +L GPI +L+ ++ + RW L + ++E
Sbjct: 77 KNKLLRIIDHVLLLHSGPINKFKLSHRDLIGVTDIDRWTLHLCRKSIKEFVLEIWKGQ-- 134
Query: 1264 HFKLPSCVXXXXXXXXXXXXXXXXRPPPGFTGLGALETLVIRHANLSEDLIRSLLSQCNL 1085
+K+ SC+ +PP F G L++L ++H L++D+ +L+S C L
Sbjct: 135 RYKIHSCLFSCQSLTHLELFNCWLKPPSTFQGFKNLKSLDLQHVTLAQDVFENLISSCPL 194
Query: 1084 LRSLTLQNCFNFGKLEISGCNTLLESLTVENCASHVEVDAPYVKNLCFRGEKTRFSIKGA 905
L LTL N F +++ +DAP + G+ S +
Sbjct: 195 LERLTLMNFDGF---------------------TNLNIDAPNLLFFDIGGKFEDISFENT 233
Query: 904 SNAINVDISRNARFHVNDQE---GXXXXXXXXXXXLDVQSLSLTGWAFKCFAAGHLPEAM 734
V I F +N G VQ L + + K A G +P +
Sbjct: 234 FQLAVVSIGLYLNFEINQSRLHGGSSNLLKFFVHLPHVQRLEVQSYFLKYLAVGVVPIKL 293
Query: 733 HSSYLRIKKLELEISSSNVKELEGLVYLFRSCQNAESLVLWINEDMADENEYRDXXXXXX 554
+ + L + I+ +++KE+ + L RS N + L E +A E
Sbjct: 294 PRPCIDLSYLSIRINFNDLKEISASLCLLRSSPNLQEL-----EILARPEEQTVLLTHTY 348
Query: 553 XXXXXELDGSFLLYGCLRDSMQWIEINNFTGLDCEVQLVKFLVSNTRGLRAMTINPINIM 374
+ + C +++++I+ +G+ E+ + FL+ ++ L MT+ P+ +
Sbjct: 349 CWED-------VYFSCPVMQLRYVKIDGISGIKPELDFINFLLLHSPVLERMTVKPVANV 401
Query: 373 G 371
G
Sbjct: 402 G 402