BLASTX nr result

ID: Cimicifuga21_contig00004443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004443
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273516.1| PREDICTED: 40S ribosomal protein S21-2 isofo...   141   2e-31
gb|AEC10964.1| 40S ribosomal protein s21e [Camellia sinensis]         141   3e-31
ref|XP_004171616.1| PREDICTED: 40S ribosomal protein S21-2-like ...   139   8e-31
ref|XP_004143089.1| PREDICTED: 40S ribosomal protein S21-2-like ...   139   8e-31
ref|XP_002283649.1| PREDICTED: 40S ribosomal protein S21 isoform...   139   1e-30

>ref|XP_002273516.1| PREDICTED: 40S ribosomal protein S21-2 isoform 1 [Vitis vinifera]
           gi|147862660|emb|CAN83594.1| hypothetical protein
           VITISV_037724 [Vitis vinifera]
           gi|297736874|emb|CBI26075.3| unnamed protein product
           [Vitis vinifera]
          Length = 82

 Score =  141 bits (356), Expect = 2e-31
 Identities = 67/72 (93%), Positives = 70/72 (97%)
 Frame = -3

Query: 912 MQNEEGFNTDLYIPRKCSATNRLITSKDHASVQINIGHVDENGMYTGQFSTFALCGFVRA 733
           MQNEEG N DLYIPRKCSATNRLITSKDHASVQINIGHVDE+G++TGQFSTFALCGFVRA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQINIGHVDEDGVFTGQFSTFALCGFVRA 60

Query: 732 QGDADSAVDRLW 697
           QGDADSAVDRLW
Sbjct: 61  QGDADSAVDRLW 72


>gb|AEC10964.1| 40S ribosomal protein s21e [Camellia sinensis]
          Length = 82

 Score =  141 bits (355), Expect = 3e-31
 Identities = 65/72 (90%), Positives = 70/72 (97%)
 Frame = -3

Query: 912 MQNEEGFNTDLYIPRKCSATNRLITSKDHASVQINIGHVDENGMYTGQFSTFALCGFVRA 733
           MQNEEG N DLYIPRKCSATNRLIT+KDHASVQIN+GH+DENG+YTGQF+TFALCGFVRA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITAKDHASVQINVGHLDENGIYTGQFTTFALCGFVRA 60

Query: 732 QGDADSAVDRLW 697
           QGDADSAVDRLW
Sbjct: 61  QGDADSAVDRLW 72


>ref|XP_004171616.1| PREDICTED: 40S ribosomal protein S21-2-like isoform 2 [Cucumis
           sativus]
          Length = 82

 Score =  139 bits (351), Expect = 8e-31
 Identities = 65/72 (90%), Positives = 70/72 (97%)
 Frame = -3

Query: 912 MQNEEGFNTDLYIPRKCSATNRLITSKDHASVQINIGHVDENGMYTGQFSTFALCGFVRA 733
           MQNEEG  T+LYIPRKCSATNRLITSKDHASVQINIGH+DENG+YTGQFSTFALCGF+RA
Sbjct: 1   MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60

Query: 732 QGDADSAVDRLW 697
           QGDADSA+DRLW
Sbjct: 61  QGDADSALDRLW 72


>ref|XP_004143089.1| PREDICTED: 40S ribosomal protein S21-2-like [Cucumis sativus]
          Length = 82

 Score =  139 bits (351), Expect = 8e-31
 Identities = 65/72 (90%), Positives = 70/72 (97%)
 Frame = -3

Query: 912 MQNEEGFNTDLYIPRKCSATNRLITSKDHASVQINIGHVDENGMYTGQFSTFALCGFVRA 733
           MQNEEG  T+LYIPRKCSATNRLITSKDHASVQINIGH+DENG+YTGQFSTFALCGF+RA
Sbjct: 1   MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60

Query: 732 QGDADSAVDRLW 697
           QGDADSA+DRLW
Sbjct: 61  QGDADSALDRLW 72


>ref|XP_002283649.1| PREDICTED: 40S ribosomal protein S21 isoform 1 [Vitis vinifera]
           gi|296089706|emb|CBI39525.3| unnamed protein product
           [Vitis vinifera]
          Length = 82

 Score =  139 bits (349), Expect = 1e-30
 Identities = 65/72 (90%), Positives = 69/72 (95%)
 Frame = -3

Query: 912 MQNEEGFNTDLYIPRKCSATNRLITSKDHASVQINIGHVDENGMYTGQFSTFALCGFVRA 733
           MQNEEG N DLYIPRKCSATNRLITSKDHASVQINIGH+DE+G YTGQF+TFALCGFVRA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQINIGHLDESGTYTGQFTTFALCGFVRA 60

Query: 732 QGDADSAVDRLW 697
           QGDADSA+DRLW
Sbjct: 61  QGDADSALDRLW 72


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