BLASTX nr result

ID: Cimicifuga21_contig00004388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004388
         (1054 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...   211   2e-52
emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]   211   3e-52
ref|XP_002266842.2| PREDICTED: ABC transporter C family member 1...   203   7e-50
ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...   189   1e-45
ref|XP_002331826.1| multidrug resistance protein ABC transporter...   178   2e-42

>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score =  211 bits (538), Expect = 2e-52
 Identities = 117/250 (46%), Positives = 150/250 (60%), Gaps = 6/250 (2%)
 Frame = +2

Query: 323  MEDLWRVFCTESKC---GGKECGSGFVFIAYPNSCIIHAXXXXXXXXXXXXXXXXXXRKP 493
            M DLW +FC E  C   GG  C S F+F  +P+SC  HA                  ++ 
Sbjct: 53   MGDLWTMFCGEPSCLDSGG--CSSEFIFFNHPSSCANHALTVCFDILLFVMFLFTMIQRT 110

Query: 494  SSSKYQIPTQF---SFLELLSAISNXXXXXXXXXXXXWMLEEKLRTSKTALPLHSWLVVL 664
            SS    +P QF   S L++ SAI N            W+LEE LR ++  LPLH WL+ L
Sbjct: 111  SSKPVHVPGQFQRFSPLQISSAIFNGCLGLVYLGLGVWILEENLRKTQIVLPLHWWLLPL 170

Query: 665  FQGFTWLFVSLTVSLRGRKLSQGFVKLWSIFASLYAAILCIFALMYVVANKQASVRIVLD 844
             QGFTWL V L VSLRG+ L +  +++ SI A L++ I  + ++   +  K+ASV IVL+
Sbjct: 171  LQGFTWLLVGLMVSLRGQYLPRSPLRILSILAFLFSGITGVLSIFSAIVYKEASVEIVLN 230

Query: 845  VLSFPGTILLLLCVYKMSKAEEVGESVNGNGLYTPLNSEAGGSSKIDSDNNLTLFAKAGW 1024
            VLS PG ILLLLC YK  K EE  + VNG+GLYTPLN EA GS+K DS  ++T FAKAG+
Sbjct: 231  VLSLPGAILLLLCAYKGYKYEETDKIVNGSGLYTPLNGEADGSAKTDSVGDVTPFAKAGF 290

Query: 1025 FSTMSFWWLN 1054
            FS+MSFWWLN
Sbjct: 291  FSSMSFWWLN 300


>emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]
          Length = 1480

 Score =  211 bits (536), Expect = 3e-52
 Identities = 118/250 (47%), Positives = 150/250 (60%), Gaps = 6/250 (2%)
 Frame = +2

Query: 323  MEDLWRVFCTESKC---GGKECGSGFVFIAYPNSCIIHAXXXXXXXXXXXXXXXXXXRKP 493
            M DLW  FC E  C   GG  C S F+F  +P+SC  HA                  ++ 
Sbjct: 1    MGDLWTXFCGEPSCLDSGG--CSSEFIFFNHPSSCANHALTVCFDILLFVMFLFTMIQRT 58

Query: 494  SSSKYQIPTQF---SFLELLSAISNXXXXXXXXXXXXWMLEEKLRTSKTALPLHSWLVVL 664
            SS    +P QF   S L++ SAI N            W+LEE LR ++  LPLH WL+ L
Sbjct: 59   SSKPVHVPGQFQRFSPLQISSAIFNGCLGLVYLXLGVWILEENLRKTQIVLPLHWWLLPL 118

Query: 665  FQGFTWLFVSLTVSLRGRKLSQGFVKLWSIFASLYAAILCIFALMYVVANKQASVRIVLD 844
             QGFTWL V L VSLRG+ L +  +++ SI A L++ I  + ++   +  K+ASV IVL+
Sbjct: 119  LQGFTWLLVGLMVSLRGQYLPRSPLRILSILAFLFSGITGVLSIFSAIVYKEASVEIVLN 178

Query: 845  VLSFPGTILLLLCVYKMSKAEEVGESVNGNGLYTPLNSEAGGSSKIDSDNNLTLFAKAGW 1024
            VLS PG ILLLLC YK  K EE  + VNG+GLYTPLN EA GS+K DS  ++T FAKAG+
Sbjct: 179  VLSLPGAILLLLCAYKGYKYEETDKIVNGSGLYTPLNGEADGSAKTDSVGDVTPFAKAGF 238

Query: 1025 FSTMSFWWLN 1054
            FS+MSFWWLN
Sbjct: 239  FSSMSFWWLN 248


>ref|XP_002266842.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1483

 Score =  203 bits (516), Expect = 7e-50
 Identities = 109/250 (43%), Positives = 147/250 (58%), Gaps = 6/250 (2%)
 Frame = +2

Query: 323  MEDLWRVFCTESKC---GGKECGSGFVFIAYPNSCIIHAXXXXXXXXXXXXXXXXXXRKP 493
            M DLW +FC ES C   G +     F   A P+SCI HA                  +K 
Sbjct: 1    MGDLWTLFCGESNCSDTGRRTSSFSFAVFASPSSCINHAFLVCFDILLLAMFVSNMIQKA 60

Query: 494  SSSKYQIPTQF---SFLELLSAISNXXXXXXXXXXXXWMLEEKLRTSKTALPLHSWLVVL 664
             S + +IP +F   S L+++SA+ N            W+LEEKLR + +  PLH W+++L
Sbjct: 61   LSKRVRIPPRFQGFSPLQIISAVFNGCLGSVYLSLGIWILEEKLRKTHSVFPLHWWILLL 120

Query: 665  FQGFTWLFVSLTVSLRGRKLSQGFVKLWSIFASLYAAILCIFALMYVVANKQASVRIVLD 844
            F GFTWL ++L VSL GR LS+   ++ SIFA L A  +C+F+L   + NK+ S++  LD
Sbjct: 121  FHGFTWLILALIVSLWGRHLSKAPFRVLSIFAFLLAGTICVFSLSPAIVNKEVSLKTTLD 180

Query: 845  VLSFPGTILLLLCVYKMSKAEEVGESVNGNGLYTPLNSEAGGSSKIDSDNNLTLFAKAGW 1024
            VLSFPG  LL+ CV+K  K +E  E+VNG+GLYTPL  E  G+S+ DS +  T FA AG+
Sbjct: 181  VLSFPGASLLIACVFKDYKDDESEETVNGSGLYTPLKEETPGNSEADSGSFATPFATAGF 240

Query: 1025 FSTMSFWWLN 1054
            FS M FWWLN
Sbjct: 241  FSRMFFWWLN 250


>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
            gi|223547514|gb|EEF49009.1| multidrug
            resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score =  189 bits (480), Expect = 1e-45
 Identities = 104/250 (41%), Positives = 146/250 (58%), Gaps = 6/250 (2%)
 Frame = +2

Query: 323  MEDLWRVFCTESKCG---GKECGSGFVFIAYPNSCIIHAXXXXXXXXXXXXXXXXXXRKP 493
            MEDLW +FC +S      G+  GS FV ++ P+SC+ H+                  +K 
Sbjct: 1    MEDLWTLFCGDSGSSDIKGRPFGSDFVVLSQPSSCVNHSLIIFLDFLLLVLLLFISIQKS 60

Query: 494  SSSKYQIPTQF---SFLELLSAISNXXXXXXXXXXXXWMLEEKLRTSKTALPLHSWLVVL 664
            S  + +IP ++   S+L++ S + N            W+LEEKLR  ++ALPL   L++ 
Sbjct: 61   SLKRDKIPPRYRGLSYLQIGSLVFNGGLGFVYLCSGAWILEEKLRKDQSALPLSRSLLLF 120

Query: 665  FQGFTWLFVSLTVSLRGRKLSQGFVKLWSIFASLYAAILCIFALMYVVANKQASVRIVLD 844
            FQGFTWL VSLT+SLRG++L +  ++L ++ A + A I+C  +L   +     SV+  LD
Sbjct: 121  FQGFTWLLVSLTISLRGKQLPRTPLRLLAVVAFVVAGIVCALSLFAAILGDIVSVKTALD 180

Query: 845  VLSFPGTILLLLCVYKMSKAEEVGESVNGNGLYTPLNSEAGGSSKIDSDNNLTLFAKAGW 1024
            V+SFPG IL+L C YK    EEV   ++ NGLY PLN E  G SK DS   +T F KAG+
Sbjct: 181  VVSFPGAILMLFCAYKSYVEEEV--DISENGLYAPLNGETDGISKADSFVQVTPFGKAGF 238

Query: 1025 FSTMSFWWLN 1054
            FS+MSFWWLN
Sbjct: 239  FSSMSFWWLN 248


>ref|XP_002331826.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222875064|gb|EEF12195.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1423

 Score =  178 bits (451), Expect = 2e-42
 Identities = 99/190 (52%), Positives = 123/190 (64%), Gaps = 3/190 (1%)
 Frame = +2

Query: 494  SSSKYQIPTQF---SFLELLSAISNXXXXXXXXXXXXWMLEEKLRTSKTALPLHSWLVVL 664
            SS  Y+I  +F   S L+++S I N            W+LEEKLR ++T LPL SWLVVL
Sbjct: 7    SSKIYKITPRFRGYSSLQIVSVILNGGIGFVYLCLGIWILEEKLRKNQTVLPLRSWLVVL 66

Query: 665  FQGFTWLFVSLTVSLRGRKLSQGFVKLWSIFASLYAAILCIFALMYVVANKQASVRIVLD 844
            FQGFTWL V LT+SL G+ L +  ++L SI ASL A I+C  ++   +  +   VRI LD
Sbjct: 67   FQGFTWLLVGLTISLLGKHLQRTPLRLLSILASLLAGIVCALSIYNAILGEGMLVRIALD 126

Query: 845  VLSFPGTILLLLCVYKMSKAEEVGESVNGNGLYTPLNSEAGGSSKIDSDNNLTLFAKAGW 1024
            VLSFPG ILLLLCVYK+ K E   E      +Y PLN EA G SKI+S N +T FAKAG+
Sbjct: 127  VLSFPGAILLLLCVYKVYKHEGNEE----RDMYAPLNGEANGVSKINSVNQVTPFAKAGF 182

Query: 1025 FSTMSFWWLN 1054
            F+ MSFWWLN
Sbjct: 183  FNKMSFWWLN 192


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