BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004378
         (1790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528160.1| pentatricopeptide repeat-containing protein,...   894   0.0  
emb|CBI27156.3| unnamed protein product [Vitis vinifera]              893   0.0  
ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containi...   893   0.0  
ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containi...   822   0.0  
ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containi...   812   0.0  

>ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532417|gb|EEF34211.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score =  894 bits (2310), Expect = 0.0
 Identities = 427/556 (76%), Positives = 489/556 (87%)
 Frame = +1

Query: 121  SDKPGFSCRAKQSSNGTSEKSNRDSLFLDKRGKLRSFNHXXXXXXXXXXXXXXXWKYGSG 300
            S K  F C+AK SS GT EK  RD+LFLDKRGK +SFNH               WKYGSG
Sbjct: 10   SGKSDFRCKAKSSSGGTVEKYKRDALFLDKRGKWQSFNHKKLSRKRCGSLRGQGWKYGSG 69

Query: 301  FVDGVFPVMSPISQQILSFLQKEVNAETVWTSLDSLPLTHATWDDVINVAVQLRLNKQWN 480
            FVDG+FPV+SPI+QQILSF+QKEV+  TVW +LD+LP TH TWDD+INV VQLRLNK+W+
Sbjct: 70   FVDGIFPVLSPIAQQILSFIQKEVDPSTVWAALDTLPATHETWDDLINVVVQLRLNKKWD 129

Query: 481  LIVLVCDWILRRSSFKPDVICYNLLIDAYGKMSQYKNAESAYLGLQKARCIPTEDTYALL 660
            LI+L+C WIL RSSF+ DV+ +NL+IDAYG+ S YK AE+ Y  L +ARCIPTEDTYALL
Sbjct: 130  LILLICQWILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALL 189

Query: 661  LRAYCTSGLLDKAEAVLAEMRKYGLPPSVVVYNAYIDGLMKERNTQKAVEIFQRMKRDRC 840
            L+AYCTSGLL+KAEA+ AEMRKYGLPPS +VYNAYIDGLMK  N Q+AVEIFQRMKRD C
Sbjct: 190  LKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCC 249

Query: 841  QPSTDTYTMLINIHGKANRSYMALKLFHEMRSQKCEPNICTYTALINAFAREGLCEKAEE 1020
            QPST+TYT+LIN+HGKA++SYMALKLF+EMRSQKC+PNICTYTAL+NAFAREGLCEKAEE
Sbjct: 250  QPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEE 309

Query: 1021 IFEKMQEDGHEPDVYTYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 1200
            IFE++QEDGHEPDVY YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG
Sbjct: 310  IFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 369

Query: 1201 RAGLHEDARSVFEELKRQGMSPTMKSHMVLLSAYSRTGDITKCEEIVNQMHKSGLKPDTF 1380
            R GLHEDA++VFEE+KR G++PTMKSHM+LLSAYS+ GD+ KCE+IVN++H+SGL+PDTF
Sbjct: 370  RGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTF 429

Query: 1381 VLNSMLNSYGRMGYFTKMEEVLNAMENGSYETDISTYNILINVYGRAGFCEKMEELFHSL 1560
            VLNSMLN YGR+G F KMEEVL AME+G Y TDISTYNILIN+YGRAGF EKME LF SL
Sbjct: 430  VLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSL 489

Query: 1561 PSKNLKPDVVTWTSRLGAYSRKKVYNRCIEIFEEMIDAGCYPDGGTAKVLLSACSSNDQV 1740
             +KNLKPDVVTWTSRLGAYSRKK+Y +C+EIFEEMIDAGC+PDG TAKVLLS+CSS DQ+
Sbjct: 490  AAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSSCSSEDQI 549

Query: 1741 EQVTTMIRTMHKDMPT 1788
            EQVTT+IRTMHK+M T
Sbjct: 550  EQVTTVIRTMHKNMET 565


>emb|CBI27156.3| unnamed protein product [Vitis vinifera]
          Length = 625

 Score =  893 bits (2308), Expect = 0.0
 Identities = 435/578 (75%), Positives = 488/578 (84%)
 Frame = +1

Query: 55   MLMVECTFNRTFIESTCGLVFFSDKPGFSCRAKQSSNGTSEKSNRDSLFLDKRGKLRSFN 234
            ML+VECT    F+E        S K     RA+ ++ G  EK  RDSLF+DKRGK RSFN
Sbjct: 52   MLIVECTSKYIFVEPR------SCKGDVQWRAENTNGGVVEKGKRDSLFIDKRGKFRSFN 105

Query: 235  HXXXXXXXXXXXXXXXWKYGSGFVDGVFPVMSPISQQILSFLQKEVNAETVWTSLDSLPL 414
                            WKYGSGFVDG+FPVMSPI+QQIL F+QKE  +  +W SLDSL  
Sbjct: 106  FKKQSRKKGGSLRGRGWKYGSGFVDGIFPVMSPIAQQILDFVQKEERSNRIWGSLDSLSP 165

Query: 415  THATWDDVINVAVQLRLNKQWNLIVLVCDWILRRSSFKPDVICYNLLIDAYGKMSQYKNA 594
             H TWDD+INVAVQLRLNKQW+ IVL+C WIL RSSF PDVICYNLLIDAYG+ S YK A
Sbjct: 166  NHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKA 225

Query: 595  ESAYLGLQKARCIPTEDTYALLLRAYCTSGLLDKAEAVLAEMRKYGLPPSVVVYNAYIDG 774
            ES YL L +ARC+PTEDTYALLL+AYCTSGLL+KAEAV AEMRKYG PPS VVYNAYIDG
Sbjct: 226  ESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDG 285

Query: 775  LMKERNTQKAVEIFQRMKRDRCQPSTDTYTMLINIHGKANRSYMALKLFHEMRSQKCEPN 954
            LMK  +TQKAVEIF+RMKRDRCQPST TYTMLIN++GKA++SYMALK+FHEMRSQKC+PN
Sbjct: 286  LMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPN 345

Query: 955  ICTYTALINAFAREGLCEKAEEIFEKMQEDGHEPDVYTYNALMEAYSRAGFPYGAAEIFS 1134
            ICT+TAL+NAFAREGLCEKAEEIFE++QE G EPDVY YNALMEAYSRAGFPYGAAEIFS
Sbjct: 346  ICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFS 405

Query: 1135 LMQHMGCEPDRASYNIMVDAYGRAGLHEDARSVFEELKRQGMSPTMKSHMVLLSAYSRTG 1314
            LMQHMGCEPDRASYNIMVDAYGRAGLHEDA++VFE +KR G++PTMKSHM+LLSAYSR G
Sbjct: 406  LMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAG 465

Query: 1315 DITKCEEIVNQMHKSGLKPDTFVLNSMLNSYGRMGYFTKMEEVLNAMENGSYETDISTYN 1494
             + KCEEIVNQMHKSG+KPDTFVLNSMLN YGR+G F KMEEVL AME G Y  DISTYN
Sbjct: 466  KVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYN 525

Query: 1495 ILINVYGRAGFCEKMEELFHSLPSKNLKPDVVTWTSRLGAYSRKKVYNRCIEIFEEMIDA 1674
            ILIN+YGRAGF  +MEELF SLP++NL PDVVTWTSR+GAYSR+K YNRC+E+FEEMIDA
Sbjct: 526  ILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDA 585

Query: 1675 GCYPDGGTAKVLLSACSSNDQVEQVTTMIRTMHKDMPT 1788
            GCYPDGGTAKVLLSACS+ DQ+++VTT+IRTMHKDM T
Sbjct: 586  GCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHKDMRT 623


>ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130-like
            [Vitis vinifera]
          Length = 587

 Score =  893 bits (2308), Expect = 0.0
 Identities = 435/578 (75%), Positives = 488/578 (84%)
 Frame = +1

Query: 55   MLMVECTFNRTFIESTCGLVFFSDKPGFSCRAKQSSNGTSEKSNRDSLFLDKRGKLRSFN 234
            ML+VECT    F+E        S K     RA+ ++ G  EK  RDSLF+DKRGK RSFN
Sbjct: 14   MLIVECTSKYIFVEPR------SCKGDVQWRAENTNGGVVEKGKRDSLFIDKRGKFRSFN 67

Query: 235  HXXXXXXXXXXXXXXXWKYGSGFVDGVFPVMSPISQQILSFLQKEVNAETVWTSLDSLPL 414
                            WKYGSGFVDG+FPVMSPI+QQIL F+QKE  +  +W SLDSL  
Sbjct: 68   FKKQSRKKGGSLRGRGWKYGSGFVDGIFPVMSPIAQQILDFVQKEERSNRIWGSLDSLSP 127

Query: 415  THATWDDVINVAVQLRLNKQWNLIVLVCDWILRRSSFKPDVICYNLLIDAYGKMSQYKNA 594
             H TWDD+INVAVQLRLNKQW+ IVL+C WIL RSSF PDVICYNLLIDAYG+ S YK A
Sbjct: 128  NHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKA 187

Query: 595  ESAYLGLQKARCIPTEDTYALLLRAYCTSGLLDKAEAVLAEMRKYGLPPSVVVYNAYIDG 774
            ES YL L +ARC+PTEDTYALLL+AYCTSGLL+KAEAV AEMRKYG PPS VVYNAYIDG
Sbjct: 188  ESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDG 247

Query: 775  LMKERNTQKAVEIFQRMKRDRCQPSTDTYTMLINIHGKANRSYMALKLFHEMRSQKCEPN 954
            LMK  +TQKAVEIF+RMKRDRCQPST TYTMLIN++GKA++SYMALK+FHEMRSQKC+PN
Sbjct: 248  LMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPN 307

Query: 955  ICTYTALINAFAREGLCEKAEEIFEKMQEDGHEPDVYTYNALMEAYSRAGFPYGAAEIFS 1134
            ICT+TAL+NAFAREGLCEKAEEIFE++QE G EPDVY YNALMEAYSRAGFPYGAAEIFS
Sbjct: 308  ICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFS 367

Query: 1135 LMQHMGCEPDRASYNIMVDAYGRAGLHEDARSVFEELKRQGMSPTMKSHMVLLSAYSRTG 1314
            LMQHMGCEPDRASYNIMVDAYGRAGLHEDA++VFE +KR G++PTMKSHM+LLSAYSR G
Sbjct: 368  LMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAG 427

Query: 1315 DITKCEEIVNQMHKSGLKPDTFVLNSMLNSYGRMGYFTKMEEVLNAMENGSYETDISTYN 1494
             + KCEEIVNQMHKSG+KPDTFVLNSMLN YGR+G F KMEEVL AME G Y  DISTYN
Sbjct: 428  KVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYN 487

Query: 1495 ILINVYGRAGFCEKMEELFHSLPSKNLKPDVVTWTSRLGAYSRKKVYNRCIEIFEEMIDA 1674
            ILIN+YGRAGF  +MEELF SLP++NL PDVVTWTSR+GAYSR+K YNRC+E+FEEMIDA
Sbjct: 488  ILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDA 547

Query: 1675 GCYPDGGTAKVLLSACSSNDQVEQVTTMIRTMHKDMPT 1788
            GCYPDGGTAKVLLSACS+ DQ+++VTT+IRTMHKDM T
Sbjct: 548  GCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHKDMRT 585


>ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130-like
            [Cucumis sativus]
          Length = 576

 Score =  822 bits (2122), Expect = 0.0
 Identities = 384/546 (70%), Positives = 466/546 (85%)
 Frame = +1

Query: 151  KQSSNGTSEKSNRDSLFLDKRGKLRSFNHXXXXXXXXXXXXXXXWKYGSGFVDGVFPVMS 330
            K +++   EKS RD L++DKRGK R+FN                WKYGSGFVDG+FPV+ 
Sbjct: 27   KCANSEVVEKSRRDGLYVDKRGKFRTFNRKRLSRKRCGSLRGRGWKYGSGFVDGIFPVLG 86

Query: 331  PISQQILSFLQKEVNAETVWTSLDSLPLTHATWDDVINVAVQLRLNKQWNLIVLVCDWIL 510
            P++QQI+ F+++EV+   +W SLD+LP T++TWDD+I+VAVQLRLNK+W  I+L+C+WI+
Sbjct: 87   PLAQQIMEFVREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWIM 146

Query: 511  RRSSFKPDVICYNLLIDAYGKMSQYKNAESAYLGLQKARCIPTEDTYALLLRAYCTSGLL 690
             +S+F+PDVI YNLL+DAYG+ S YK+ ES YL L ++ CIPTEDTYALLL+AYC SGLL
Sbjct: 147  NKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLL 206

Query: 691  DKAEAVLAEMRKYGLPPSVVVYNAYIDGLMKERNTQKAVEIFQRMKRDRCQPSTDTYTML 870
            +KAEAV AEMRKYGL PS +VYNAYIDGL+K  N  KAVEIF RMKRD CQP+TDTYTML
Sbjct: 207  EKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTML 266

Query: 871  INIHGKANRSYMALKLFHEMRSQKCEPNICTYTALINAFAREGLCEKAEEIFEKMQEDGH 1050
            IN++GK ++S+MA  +F EMR+Q+C+PNICT+TAL+NA AREGLCEKAEEIFE+MQE G+
Sbjct: 267  INVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGY 326

Query: 1051 EPDVYTYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDARS 1230
            EPDVY YNALME+YSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDA++
Sbjct: 327  EPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQA 386

Query: 1231 VFEELKRQGMSPTMKSHMVLLSAYSRTGDITKCEEIVNQMHKSGLKPDTFVLNSMLNSYG 1410
            VFEE+KR G++PTMKSHM+LLSAYS  G++ KCE+I+ QMHKSGLKPDTFV+NSMLN YG
Sbjct: 387  VFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYG 446

Query: 1411 RMGYFTKMEEVLNAMENGSYETDISTYNILINVYGRAGFCEKMEELFHSLPSKNLKPDVV 1590
            R+G F KME++ + M+ G    DISTYNILINVYGRAGF E+MEELF  LP+KNL+PDVV
Sbjct: 447  RLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVV 506

Query: 1591 TWTSRLGAYSRKKVYNRCIEIFEEMIDAGCYPDGGTAKVLLSACSSNDQVEQVTTMIRTM 1770
            TWTSR+GAYSRKK+Y RC+E+FE+MIDAGCYPDGGTAKVLLSACSS +Q+EQVT ++RTM
Sbjct: 507  TWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTM 566

Query: 1771 HKDMPT 1788
            HKD+ T
Sbjct: 567  HKDLKT 572


>ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35130-like
            [Glycine max]
          Length = 576

 Score =  812 bits (2097), Expect = 0.0
 Identities = 395/578 (68%), Positives = 468/578 (80%)
 Frame = +1

Query: 55   MLMVECTFNRTFIESTCGLVFFSDKPGFSCRAKQSSNGTSEKSNRDSLFLDKRGKLRSFN 234
            ML   CT + T IE    +   +D      +A  S++   EK  RDS+++DK G+LR+FN
Sbjct: 1    MLNSICTLSHTLIEPRACM---NDS---EWKANDSNSVALEKFKRDSVYIDKNGRLRNFN 54

Query: 235  HXXXXXXXXXXXXXXXWKYGSGFVDGVFPVMSPISQQILSFLQKEVNAETVWTSLDSLPL 414
            H               WKYGSGFVDG+FPV+SP +QQIL +++K V +E++W SLD LP 
Sbjct: 55   HKKVSRKKCGSLRGRGWKYGSGFVDGIFPVLSPTAQQILDYVEKGVESESIWGSLDMLPP 114

Query: 415  THATWDDVINVAVQLRLNKQWNLIVLVCDWILRRSSFKPDVICYNLLIDAYGKMSQYKNA 594
            T   WDD+  VAVQLR+ KQW+ I+ +C WIL RSSFKPDVICYNLLI+A+G+   YK A
Sbjct: 115  TLDAWDDIFTVAVQLRMRKQWDSIISICRWILLRSSFKPDVICYNLLIEAFGQKLLYKEA 174

Query: 595  ESAYLGLQKARCIPTEDTYALLLRAYCTSGLLDKAEAVLAEMRKYGLPPSVVVYNAYIDG 774
            ES YL L +ARCIPTEDTYALL++AYC SGLL+KAEAV AEMR YGLP S VVYNAYI+G
Sbjct: 175  ESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYING 234

Query: 775  LMKERNTQKAVEIFQRMKRDRCQPSTDTYTMLINIHGKANRSYMALKLFHEMRSQKCEPN 954
            LMK  N+ KA EIF+RMK+D C+P+T+TYTMLIN++GKA +S+MALKLFHEM S  C+PN
Sbjct: 235  LMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPN 294

Query: 955  ICTYTALINAFAREGLCEKAEEIFEKMQEDGHEPDVYTYNALMEAYSRAGFPYGAAEIFS 1134
            ICTYTAL+NAFAREGLCEKAEE+FE+MQE G EPDVY YNALMEAYSRAG+PYGAAEIFS
Sbjct: 295  ICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFS 354

Query: 1135 LMQHMGCEPDRASYNIMVDAYGRAGLHEDARSVFEELKRQGMSPTMKSHMVLLSAYSRTG 1314
            LMQHMGCEPDRASYNI+VDAYG+AG  +DA +VF+++KR G++PTMKSHMVLLSAYS+ G
Sbjct: 355  LMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMG 414

Query: 1315 DITKCEEIVNQMHKSGLKPDTFVLNSMLNSYGRMGYFTKMEEVLNAMENGSYETDISTYN 1494
             + KCEEI+NQM KSGLK DT+VLNSMLN YGR+G F KMEEVL  ME GSY  DISTYN
Sbjct: 415  SVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYN 474

Query: 1495 ILINVYGRAGFCEKMEELFHSLPSKNLKPDVVTWTSRLGAYSRKKVYNRCIEIFEEMIDA 1674
            ILIN YG+AGF E+ME+LF  LPSK LKPDVVTWTSR+GAYS+KK+Y +C+EIFEEMID 
Sbjct: 475  ILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDD 534

Query: 1675 GCYPDGGTAKVLLSACSSNDQVEQVTTMIRTMHKDMPT 1788
            GCYPDGGTAKVLL+ACS+ DQ EQVTT+IRTMHKDM T
Sbjct: 535  GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHKDMKT 572