BLASTX nr result

ID: Cimicifuga21_contig00004376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004376
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235984.1| uncharacterized protein LOC100526919 [Glycin...   210   1e-52
ref|XP_003597006.1| RING-box protein [Medicago truncatula] gi|35...   209   2e-52
ref|XP_003540309.1| PREDICTED: RING-box protein 1a-like isoform ...   206   1e-51
ref|XP_002874003.1| ring-box 1 [Arabidopsis lyrata subsp. lyrata...   206   1e-51
ref|NP_568396.1| RING-box protein 1 [Arabidopsis thaliana] gi|37...   206   1e-51

>ref|NP_001235984.1| uncharacterized protein LOC100526919 [Glycine max]
           gi|255631147|gb|ACU15939.1| unknown [Glycine max]
          Length = 118

 Score =  210 bits (534), Expect = 1e-52
 Identities = 95/118 (80%), Positives = 98/118 (83%)
 Frame = +3

Query: 69  MASLDTDINMVXXXXXXXXXXXXXXXXXXXRFEIKKWNAVSLWAWDIVVDNCAICRNHIM 248
           MA+LD+D+ MV                   RFEIKKWNAVSLWAWDIVVDNCAICRNHIM
Sbjct: 1   MATLDSDVTMVPAGEPSTSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIM 60

Query: 249 DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 422
           DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118


>ref|XP_003597006.1| RING-box protein [Medicago truncatula] gi|355486054|gb|AES67257.1|
           RING-box protein [Medicago truncatula]
          Length = 118

 Score =  209 bits (532), Expect = 2e-52
 Identities = 95/118 (80%), Positives = 98/118 (83%)
 Frame = +3

Query: 69  MASLDTDINMVXXXXXXXXXXXXXXXXXXXRFEIKKWNAVSLWAWDIVVDNCAICRNHIM 248
           MA+LD+D+ MV                   RFEIKKWNAVSLWAWDIVVDNCAICRNHIM
Sbjct: 1   MATLDSDVPMVPAGETSCCAHGGPSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIM 60

Query: 249 DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 422
           DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118


>ref|XP_003540309.1| PREDICTED: RING-box protein 1a-like isoform 1 [Glycine max]
          Length = 118

 Score =  206 bits (525), Expect = 1e-51
 Identities = 93/118 (78%), Positives = 97/118 (82%)
 Frame = +3

Query: 69  MASLDTDINMVXXXXXXXXXXXXXXXXXXXRFEIKKWNAVSLWAWDIVVDNCAICRNHIM 248
           MA+LD+D+ +                    RFEIKKWNAVSLWAWDIVVDNCAICRNHIM
Sbjct: 1   MATLDSDVTVFPAGEASSSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIM 60

Query: 249 DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 422
           DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118


>ref|XP_002874003.1| ring-box 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297319840|gb|EFH50262.1| ring-box 1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 118

 Score =  206 bits (525), Expect = 1e-51
 Identities = 92/118 (77%), Positives = 98/118 (83%)
 Frame = +3

Query: 69  MASLDTDINMVXXXXXXXXXXXXXXXXXXXRFEIKKWNAVSLWAWDIVVDNCAICRNHIM 248
           MA+LD+D+ M+                   RFEIKKW+AV+LWAWDIVVDNCAICRNHIM
Sbjct: 1   MANLDSDVTMIPAGEASSSVAASSFNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIM 60

Query: 249 DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 422
           DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118


>ref|NP_568396.1| RING-box protein 1 [Arabidopsis thaliana]
           gi|37537976|sp|Q940X7.1|RBX1A_ARATH RecName:
           Full=RING-box protein 1a; AltName: Full=At-Rbx1;1;
           AltName: Full=Protein RING of cullins 1; AltName:
           Full=RBX1-2; AltName: Full=RBX1a-At
           gi|16186265|gb|AAL13435.1| ring box-1-like protein
           [Arabidopsis thaliana] gi|18252991|gb|AAL62422.1|
           ring-box protein - like [Arabidopsis thaliana]
           gi|21389679|gb|AAM48038.1| ring-box protein-like
           [Arabidopsis thaliana] gi|21592528|gb|AAM64477.1|
           ring-box protein-like [Arabidopsis thaliana]
           gi|26451409|dbj|BAC42804.1| putative ring-box protein
           [Arabidopsis thaliana] gi|332005476|gb|AED92859.1|
           RING-box protein 1 [Arabidopsis thaliana]
          Length = 118

 Score =  206 bits (525), Expect = 1e-51
 Identities = 92/118 (77%), Positives = 98/118 (83%)
 Frame = +3

Query: 69  MASLDTDINMVXXXXXXXXXXXXXXXXXXXRFEIKKWNAVSLWAWDIVVDNCAICRNHIM 248
           MA+LD+D+ M+                   RFEIKKW+AV+LWAWDIVVDNCAICRNHIM
Sbjct: 1   MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIM 60

Query: 249 DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 422
           DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 61  DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118