BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004361
         (4259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 h...   676   0.0  
emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]   674   0.0  
ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 h...   662   0.0  
ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 h...   660   0.0  
ref|XP_002298619.1| chromatin remodeling complex subunit [Populu...   650   0.0  

>ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
          Length = 548

 Score =  676 bits (1743), Expect = 0.0
 Identities = 354/553 (64%), Positives = 396/553 (71%), Gaps = 3/553 (0%)
 Frame = +2

Query: 2273 MSANNNNHTRNIGGPS-PLGNSGIXXXXXXXXXXXXXXXQSQSQGPDGSHFQSQFQNRTX 2449
            M+ NNNN  +N+G  S P GN+G+               Q Q+QG  G  FQ QFQ    
Sbjct: 1    MAVNNNNPPKNLGASSSPFGNAGMGSPAMPANPVFS---QPQAQGQIGGGFQGQFQLSQA 57

Query: 2450 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGIG--HVGASSPSVSTP 2623
                                                     S GIG  ++G SSPS+  P
Sbjct: 58   HQAHVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAP 117

Query: 2624 GMASGTAXXXXXXXXXXXXXXXXXXXXXXYKHMELTPAARRKKRKLPEKQLPDRVAALLP 2803
            G  +                          K MELTPAARRKK+KLPEKQL DRVAA+LP
Sbjct: 118  G--NSNMKRTLQKPPVRPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILP 175

Query: 2804 ESALYTQLLEFEARVDAALARKKIDIQESLKNPPCIQRTLRIYVFNTFANQIRSIPERQN 2983
            ESALYTQLLEFE+RVDAALARKKIDIQE+LKNPPC+Q+TLRIY+FNTFANQIR+IP++ N
Sbjct: 176  ESALYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFANQIRTIPKKPN 235

Query: 2984 TEPPSWSLKIIGRILEDGVEPDSGGLSQKPSTLYPKFSSFFKRITISLDPSLYPDNPTII 3163
             EPP+W+LKIIGRILE+GV+PD   +  K +  YPKFSSFFKR+TISLD  LYPDNP II
Sbjct: 236  AEPPTWTLKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIII 295

Query: 3164 WENARSAAPHEGFEIKRKGDKEFNVGIRLEMNYVPEKFKLSPALTEVLAIEVDTRARIIA 3343
            WENARS APHEGFE+KRKGDKEF V IRLEMNYVPEKFKLS AL EVL IEVDTR RIIA
Sbjct: 296  WENARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIA 355

Query: 3344 AIWQYVKARKLQDPSDPSFFKCDPPLRKVFGEDRMKFTMVSQKISHHLSTPQPIHLEHTV 3523
            AIW YVKARKLQ+P+DPSFF CDPPL+KVFGED+MKFTMVSQKIS HLS PQPIHLEH +
Sbjct: 356  AIWHYVKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKI 415

Query: 3524 RLSGSSPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXXHEHRRR 3703
            +LSG+ PAG+ACYDVLVDVPFP+QKE+SA LANTEK+K                HEHRRR
Sbjct: 416  KLSGNCPAGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRR 475

Query: 3704 RAFFLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKEHRSDFYNQPWVEDAVIRYLN 3883
            RAFFLGFSQSPVEFIN LI SQS+DLKLVAGEASRNAEKE RSDF+NQPWVEDAVIRYLN
Sbjct: 476  RAFFLGFSQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLN 535

Query: 3884 RKPATGNDAPGST 3922
            RKP  G+DAPGST
Sbjct: 536  RKPVAGSDAPGST 548


>emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]
          Length = 548

 Score =  674 bits (1738), Expect = 0.0
 Identities = 354/553 (64%), Positives = 396/553 (71%), Gaps = 3/553 (0%)
 Frame = +2

Query: 2273 MSANNNNHTRNIGGPS-PLGNSGIXXXXXXXXXXXXXXXQSQSQGPDGSHFQSQFQNRTX 2449
            M+ NNNN  +N+G  S P GN+G+               Q Q+QG  G  FQ QFQ    
Sbjct: 1    MAVNNNNPPKNLGASSSPFGNAGMGSPAMPANPVFS---QPQAQGQIGGGFQGQFQLSQA 57

Query: 2450 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGIG--HVGASSPSVSTP 2623
                                                     S GIG  ++G SSPS+  P
Sbjct: 58   HQAHVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAP 117

Query: 2624 GMASGTAXXXXXXXXXXXXXXXXXXXXXXYKHMELTPAARRKKRKLPEKQLPDRVAALLP 2803
            G  +                          K MELTPAARRKK+KLPEKQL DRVAA+LP
Sbjct: 118  G--NSNMKRXLQKPPVRPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILP 175

Query: 2804 ESALYTQLLEFEARVDAALARKKIDIQESLKNPPCIQRTLRIYVFNTFANQIRSIPERQN 2983
            ESALYTQLLEFE+RVDAALARKKIDIQE+LKNPPC+Q+TLRIY+FNTF NQIR+IP++ N
Sbjct: 176  ESALYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFXNQIRTIPKKPN 235

Query: 2984 TEPPSWSLKIIGRILEDGVEPDSGGLSQKPSTLYPKFSSFFKRITISLDPSLYPDNPTII 3163
             EPP+W+LKIIGRILE+GV+PD   +  K +  YPKFSSFFKR+TISLD  LYPDNP II
Sbjct: 236  AEPPTWTLKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIII 295

Query: 3164 WENARSAAPHEGFEIKRKGDKEFNVGIRLEMNYVPEKFKLSPALTEVLAIEVDTRARIIA 3343
            WENARS APHEGFE+KRKGDKEF V IRLEMNYVPEKFKLS AL EVL IEVDTR RIIA
Sbjct: 296  WENARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIA 355

Query: 3344 AIWQYVKARKLQDPSDPSFFKCDPPLRKVFGEDRMKFTMVSQKISHHLSTPQPIHLEHTV 3523
            AIW YVKARKLQ+P+DPSFF CDPPL+KVFGED+MKFTMVSQKIS HLS PQPIHLEH +
Sbjct: 356  AIWHYVKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKI 415

Query: 3524 RLSGSSPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXXHEHRRR 3703
            +LSG+ PAG+ACYDVLVDVPFP+QKE+SA LANTEK+K                HEHRRR
Sbjct: 416  KLSGNCPAGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRR 475

Query: 3704 RAFFLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKEHRSDFYNQPWVEDAVIRYLN 3883
            RAFFLGFSQSPVEFIN LI SQS+DLKLVAGEASRNAEKE RSDF+NQPWVEDAVIRYLN
Sbjct: 476  RAFFLGFSQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLN 535

Query: 3884 RKPATGNDAPGST 3922
            RKP  G+DAPGST
Sbjct: 536  RKPVAGSDAPGST 548


>ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
          Length = 543

 Score =  662 bits (1707), Expect = 0.0
 Identities = 352/551 (63%), Positives = 396/551 (71%), Gaps = 1/551 (0%)
 Frame = +2

Query: 2273 MSANNNNHTRNIGGPSP-LGNSGIXXXXXXXXXXXXXXXQSQSQGPDGSHFQSQFQNRTX 2449
            MS NNNN ++ IG  S   GN+GI               Q Q+Q P G  FQ QF     
Sbjct: 1    MSVNNNNPSKGIGASSSTFGNAGIPSNSIPSNPGFSQS-QGQAQIPVG--FQGQFPLSQA 57

Query: 2450 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGIGHVGASSPSVSTPGM 2629
                                                     + G+G    SSPS+STPG 
Sbjct: 58   HAIVQAQSKAQAQAQAQAAAAAHAQLQAHLQAQGLSLNQNQAGGLG---VSSPSISTPGN 114

Query: 2630 ASGTAXXXXXXXXXXXXXXXXXXXXXXYKHMELTPAARRKKRKLPEKQLPDRVAALLPES 2809
            ASG                         + MELTPAARRKK+KLPEKQL D+VAA+LPES
Sbjct: 115  ASGKRIPMKPPMRPVGFSPPNSFSPL--RPMELTPAARRKKQKLPEKQLQDKVAAILPES 172

Query: 2810 ALYTQLLEFEARVDAALARKKIDIQESLKNPPCIQRTLRIYVFNTFANQIRSIPERQNTE 2989
            ALYTQLLEFE+RVDAALARKK DIQE+LKNPPCIQ+TLRIYVFNTFANQIR+IP++ N E
Sbjct: 173  ALYTQLLEFESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNVE 232

Query: 2990 PPSWSLKIIGRILEDGVEPDSGGLSQKPSTLYPKFSSFFKRITISLDPSLYPDNPTIIWE 3169
            PP+W+LKI+GRILEDGV+PD  G+ QK S LYPKFS+FFKR+TISLD  LYPDN  I+WE
Sbjct: 233  PPTWTLKIVGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIILWE 292

Query: 3170 NARSAAPHEGFEIKRKGDKEFNVGIRLEMNYVPEKFKLSPALTEVLAIEVDTRARIIAAI 3349
            NARS APHEGFE+KRKGDKEF V IRLEMNYVPEKFKLSPALTEVL IEVDTR RI+AAI
Sbjct: 293  NARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAI 352

Query: 3350 WQYVKARKLQDPSDPSFFKCDPPLRKVFGEDRMKFTMVSQKISHHLSTPQPIHLEHTVRL 3529
            W YVKARKLQ+P+DPS+F CDPPL+KVFGE+ MKFTMVSQKIS HL  PQPI LEH ++L
Sbjct: 353  WHYVKARKLQNPNDPSYFHCDPPLQKVFGEENMKFTMVSQKISSHLFPPQPILLEHKIKL 412

Query: 3530 SGSSPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXXHEHRRRRA 3709
            SG+SPAG+ACYDV+VDVPFP+Q+E+SA LAN EK+K                HEHRRRRA
Sbjct: 413  SGNSPAGTACYDVMVDVPFPIQRELSALLANVEKNKDIETCDEAICGIIRKIHEHRRRRA 472

Query: 3710 FFLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKEHRSDFYNQPWVEDAVIRYLNRK 3889
            FFLGFSQSPVEFINALI SQSRDLKLV+GE SRNAEKE RSDF+NQPWVEDAVIRYLNRK
Sbjct: 473  FFLGFSQSPVEFINALIESQSRDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRK 532

Query: 3890 PATGNDAPGST 3922
            PA G+DAPGST
Sbjct: 533  PAAGSDAPGST 543


>ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
            gi|449515744|ref|XP_004164908.1| PREDICTED: SWI/SNF
            complex component SNF12 homolog [Cucumis sativus]
          Length = 547

 Score =  660 bits (1702), Expect = 0.0
 Identities = 344/552 (62%), Positives = 399/552 (72%), Gaps = 2/552 (0%)
 Frame = +2

Query: 2273 MSANNNNHTRNIGGPS--PLGNSGIXXXXXXXXXXXXXXXQSQSQGPDGSHFQSQFQNRT 2446
            MS NNNN  + +GG S  P GNSG+               Q Q+Q   G+ FQ+ F   T
Sbjct: 1    MSMNNNNPPKTLGGASSSPFGNSGMVPPSMAANSTSFSQPQPQAQL--GAGFQNPFP-LT 57

Query: 2447 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGIGHVGASSPSVSTPG 2626
                                                      + G G+VG+ SP  STPG
Sbjct: 58   TAQVLAQAQYKAHAHAQAQAQAAHAQFQAQLQAQGLSLTQSQNVGGGNVGSPSPGFSTPG 117

Query: 2627 MASGTAXXXXXXXXXXXXXXXXXXXXXXYKHMELTPAARRKKRKLPEKQLPDRVAALLPE 2806
            +A                           K MELTPAAR+KK+KLPEKQL D+VAA+LPE
Sbjct: 118  LAG--VKRIPQKPPVRPPILSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPE 175

Query: 2807 SALYTQLLEFEARVDAALARKKIDIQESLKNPPCIQRTLRIYVFNTFANQIRSIPERQNT 2986
            SALYTQLLEFE+RVDAALARKK+DI E+LKNPPCIQ+TLRIYVFNTFANQ+ +IP++ N 
Sbjct: 176  SALYTQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNA 235

Query: 2987 EPPSWSLKIIGRILEDGVEPDSGGLSQKPSTLYPKFSSFFKRITISLDPSLYPDNPTIIW 3166
            +PP+W+LKIIGRILEDG++PD  G+ Q+ + LYPKFSSFFKR+TISLD  LYPD+  I+W
Sbjct: 236  DPPTWTLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVW 295

Query: 3167 ENARSAAPHEGFEIKRKGDKEFNVGIRLEMNYVPEKFKLSPALTEVLAIEVDTRARIIAA 3346
            ENARS APHEGFE+KRKGDKEF+V IRLEMNY+PEKFKLSPAL EVL IEVDTR RIIAA
Sbjct: 296  ENARSPAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAA 355

Query: 3347 IWQYVKARKLQDPSDPSFFKCDPPLRKVFGEDRMKFTMVSQKISHHLSTPQPIHLEHTVR 3526
            IW YVKARKLQ+P+DPSFF CDPPL+KVFGED++KFTMVSQ+IS HL  PQPIHLEH V+
Sbjct: 356  IWHYVKARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVK 415

Query: 3527 LSGSSPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXXHEHRRRR 3706
            LSG+SPAG+ACYDVLVDVPFP+ +E+SA LAN EK+K                HEHRRRR
Sbjct: 416  LSGNSPAGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRR 475

Query: 3707 AFFLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKEHRSDFYNQPWVEDAVIRYLNR 3886
            AFFLGFSQSPVEFI+ALI SQS+DLKL+AGEASRNAEKE RSDF+NQPWVEDAVIRY+NR
Sbjct: 476  AFFLGFSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINR 535

Query: 3887 KPATGNDAPGST 3922
            KPATG+DAPGST
Sbjct: 536  KPATGSDAPGST 547


>ref|XP_002298619.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222845877|gb|EEE83424.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 555

 Score =  650 bits (1676), Expect = 0.0
 Identities = 324/449 (72%), Positives = 368/449 (81%)
 Frame = +2

Query: 2573 SPGIGHVGASSPSVSTPGMASGTAXXXXXXXXXXXXXXXXXXXXXXYKHMELTPAARRKK 2752
            S GIG++G+SSPS STPG AS  A                       K M+L+ AARRKK
Sbjct: 108  SAGIGNLGSSSPSFSTPGNAS--AKRLPQKPLGRPPGVPMSSMVSPLKPMDLSSAARRKK 165

Query: 2753 RKLPEKQLPDRVAALLPESALYTQLLEFEARVDAALARKKIDIQESLKNPPCIQRTLRIY 2932
            +KLPEKQL DRVAA+LPESALYTQLLEFE RVDAALARKK+DIQE+LK+PPC+Q+TLRIY
Sbjct: 166  QKLPEKQLQDRVAAILPESALYTQLLEFETRVDAALARKKVDIQEALKSPPCVQKTLRIY 225

Query: 2933 VFNTFANQIRSIPERQNTEPPSWSLKIIGRILEDGVEPDSGGLSQKPSTLYPKFSSFFKR 3112
            VFNTFANQIR+IP++ N +PP+W+LK+IGRILEDGV+PD  G  QK + LYPKFSSFFKR
Sbjct: 226  VFNTFANQIRTIPKKPNADPPTWTLKVIGRILEDGVDPDQPGAVQKSNPLYPKFSSFFKR 285

Query: 3113 ITISLDPSLYPDNPTIIWENARSAAPHEGFEIKRKGDKEFNVGIRLEMNYVPEKFKLSPA 3292
            ++I LD  LYPDN  IIWE+ARS APHEGFE+KRKGDKEF+V IRLEMNYVPEKFKLSPA
Sbjct: 286  VSIQLDQRLYPDNHIIIWEHARSPAPHEGFEVKRKGDKEFSVNIRLEMNYVPEKFKLSPA 345

Query: 3293 LTEVLAIEVDTRARIIAAIWQYVKARKLQDPSDPSFFKCDPPLRKVFGEDRMKFTMVSQK 3472
            L EVL IEV+TR RIIAAIW YVKARKLQ+P DPSFF CD PL+KVFGE +MKFTMVSQ+
Sbjct: 346  LMEVLGIEVETRPRIIAAIWHYVKARKLQNPEDPSFFNCDAPLQKVFGESKMKFTMVSQR 405

Query: 3473 ISHHLSTPQPIHLEHTVRLSGSSPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXX 3652
            IS HLS PQPIHLEH ++LSG+SPAG+ CYDV+VDVPFP+Q+E+SA LAN EK+K     
Sbjct: 406  ISQHLSPPQPIHLEHKIKLSGNSPAGTVCYDVVVDVPFPIQRELSALLANAEKNKEIDTC 465

Query: 3653 XXXXXXXXXXXHEHRRRRAFFLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKEHRS 3832
                       HEHRRRRAFFLGFSQSPVEF+NALI SQS+DLKLVAGEASRNAEKE RS
Sbjct: 466  DEAICTAIRKIHEHRRRRAFFLGFSQSPVEFVNALIESQSKDLKLVAGEASRNAEKERRS 525

Query: 3833 DFYNQPWVEDAVIRYLNRKPATGNDAPGS 3919
            DF+NQPWVEDAVIRYLNRKPA G+DAP S
Sbjct: 526  DFFNQPWVEDAVIRYLNRKPAAGSDAPRS 554