BLASTX nr result

ID: Cimicifuga21_contig00004359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004359
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243...    79   6e-13
gb|ACH87180.1| unknown protein [Camellia sinensis]                     75   9e-12
ref|XP_002514895.1| conserved hypothetical protein [Ricinus comm...    71   2e-10
ref|XP_003524904.1| PREDICTED: uncharacterized protein LOC100803...    68   1e-09
ref|XP_003524903.1| PREDICTED: uncharacterized protein LOC100803...    68   1e-09

>ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243721 [Vitis vinifera]
          Length = 127

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 51/113 (45%), Positives = 57/113 (50%)
 Frame = -2

Query: 400 MMRSEDQQSRLLYELCALVLTILKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPXXXX 221
           M R +DQQSR+  EL ALVL +L+                               P    
Sbjct: 1   MRRQQDQQSRVFCELSALVLNLLRSPPSPAPFSEHSPEVYTSRRPTTTQIS----PAGFA 56

Query: 220 XXXXXXXXXXXXXGSVTFVIGFILMPWVLGLVMVLYFVGIVSNLSLLGRAILC 62
                        GSVTF IGFILMPWVLGLVMV YFVGIVSNLS+LGRAI+C
Sbjct: 57  SLLLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYFVGIVSNLSVLGRAIIC 109


>gb|ACH87180.1| unknown protein [Camellia sinensis]
          Length = 129

 Score = 75.5 bits (184), Expect = 9e-12
 Identities = 48/113 (42%), Positives = 57/113 (50%)
 Frame = -2

Query: 400 MMRSEDQQSRLLYELCALVLTILKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPXXXX 221
           MMR +DQQSR+  EL AL+L +L+                               P    
Sbjct: 1   MMRRQDQQSRVFCELSALILNLLRSPPTPIQFSDPSPAAVPSSRRRPETPPIS--PAGFA 58

Query: 220 XXXXXXXXXXXXXGSVTFVIGFILMPWVLGLVMVLYFVGIVSNLSLLGRAILC 62
                        GSVTF IGF+LMPWVLGLVMV Y VGIVS+LS++GRAILC
Sbjct: 59  SLLLGISLALMLCGSVTFFIGFMLMPWVLGLVMVFYVVGIVSSLSMIGRAILC 111


>ref|XP_002514895.1| conserved hypothetical protein [Ricinus communis]
           gi|223545946|gb|EEF47449.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 134

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 48/116 (41%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
 Frame = -2

Query: 400 MMRS-EDQQSRLLYELCALVLTILKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--PX 230
           MMRS ED QSR+ YEL ALVL +L+                                 P 
Sbjct: 1   MMRSQEDHQSRVFYELSALVLNLLRSPPSSPSSSSAHFSDQSPSESQRRRRPSLSQISPA 60

Query: 229 XXXXXXXXXXXXXXXXGSVTFVIGFILMPWVLGLVMVLYFVGIVSNLSLLGRAILC 62
                           GSVTF IGFILMPWVLGLVMV Y  G+VS +S+LGR+ LC
Sbjct: 61  GFASLMLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGVVSTISMLGRSFLC 116


>ref|XP_003524904.1| PREDICTED: uncharacterized protein LOC100803665 isoform 2 [Glycine
           max]
          Length = 112

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 45/113 (39%), Positives = 53/113 (46%)
 Frame = -2

Query: 400 MMRSEDQQSRLLYELCALVLTILKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPXXXX 221
           M   EDQQSR+  EL ALV  +L+                               P    
Sbjct: 1   MRGQEDQQSRVFCELSALVFNLLRSPSIVPEPPARRSPAGAQIT-----------PAGFA 49

Query: 220 XXXXXXXXXXXXXGSVTFVIGFILMPWVLGLVMVLYFVGIVSNLSLLGRAILC 62
                        GSVTF IGF+LMPWVLGLVMV Y  G+VS+LS+LGR+ILC
Sbjct: 50  SLLLGISVALMLCGSVTFFIGFMLMPWVLGLVMVFYVAGVVSSLSVLGRSILC 102


>ref|XP_003524903.1| PREDICTED: uncharacterized protein LOC100803665 isoform 1 [Glycine
           max]
          Length = 116

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 45/113 (39%), Positives = 53/113 (46%)
 Frame = -2

Query: 400 MMRSEDQQSRLLYELCALVLTILKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPXXXX 221
           M   EDQQSR+  EL ALV  +L+                               P    
Sbjct: 1   MRGQEDQQSRVFCELSALVFNLLRSPSIVPEPPARRSPAGAQIT-----------PAGFA 49

Query: 220 XXXXXXXXXXXXXGSVTFVIGFILMPWVLGLVMVLYFVGIVSNLSLLGRAILC 62
                        GSVTF IGF+LMPWVLGLVMV Y  G+VS+LS+LGR+ILC
Sbjct: 50  SLLLGISVALMLCGSVTFFIGFMLMPWVLGLVMVFYVAGVVSSLSVLGRSILC 102


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