BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004354
         (2578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515058.1| copine, putative [Ricinus communis] gi|22354...   569   e-159
gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crys...   567   e-159
ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   567   e-159
ref|XP_002873665.1| hypothetical protein ARALYDRAFT_488284 [Arab...   565   e-158
ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   565   e-158

>ref|XP_002515058.1| copine, putative [Ricinus communis] gi|223546109|gb|EEF47612.1|
            copine, putative [Ricinus communis]
          Length = 478

 Score =  569 bits (1467), Expect = e-159
 Identities = 281/403 (69%), Positives = 315/403 (78%), Gaps = 11/403 (2%)
 Frame = +1

Query: 658  PQPTLDRRYSRIADQYNSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRKSLH 837
            PQ  LDR+YSRIAD Y +L+QVT ALA++GLESSNLIVGIDFTKSNEWTGARS+NR+SLH
Sbjct: 74   PQKRLDRKYSRIADDYKTLDQVTAALAQSGLESSNLIVGIDFTKSNEWTGARSYNRRSLH 133

Query: 838  HIGDVGNPYEQAISIIGRTLSGFDEDNLIPCFGFGDATTHDRDVFSFYPDGRHCNGFEEA 1017
            HIG+  NPYEQAISIIGRTLS FDEDNLIPCFGFGDA+THD+DVFSF+ D R CNGFEE 
Sbjct: 134  HIGNGQNPYEQAISIIGRTLSAFDEDNLIPCFGFGDASTHDQDVFSFHQDERFCNGFEEV 193

Query: 1018 LVRYREIVPQLRLAGPTSFAPVIEMAMSIVEESGGQYHVLVIIADGQVTRSVDTEHGQLS 1197
            L RYREIVPQLRLAGPTSFAP+I+MA++IVE+SGGQYHVL+IIADGQVTRS+DT+HGQLS
Sbjct: 194  LTRYREIVPQLRLAGPTSFAPIIDMAITIVEQSGGQYHVLLIIADGQVTRSIDTQHGQLS 253

Query: 1198 PQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMKEFDDNIPARAFDNFQFVNFTEIMSKN 1377
            PQEQ+T+DAIVKASEYPLSI+LVGVGDGPWDMM+EFDDNIPAR FDNFQFVNFTEIMSKN
Sbjct: 254  PQEQRTIDAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARVFDNFQFVNFTEIMSKN 313

Query: 1378 VPVHRKETEFALTALMEIPSQYKATIELKLLGRQTGSSPERFPLPPPVHXXXXXXXXXXX 1557
            V   RKETEFAL ALMEIP+QYKATIEL +LG++TG+ PER PLPPP+            
Sbjct: 314  VNQSRKETEFALAALMEIPAQYKATIELGILGQRTGNCPERVPLPPPIRGASSFSNSPKP 373

Query: 1558 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ-----------DATFGTAPPESSAFDQQ 1704
                                                       D    T P  SS +D Q
Sbjct: 374  SQSSSFQQRAPSYSGYDASGPSYSGYDGSVPSYSGQDTVVAGYDTPVNTNPHASSTYDNQ 433

Query: 1705 VCPICLSNPKDMAFGCGHQTCCDCGQSLQSCPICRSPIQTRIK 1833
            VCPICL+N KDMAFGCGHQTCC+CG+ LQ CPICRSPIQTRI+
Sbjct: 434  VCPICLTNRKDMAFGCGHQTCCECGEDLQLCPICRSPIQTRIR 476


>gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crystallinum]
          Length = 472

 Score =  567 bits (1462), Expect = e-159
 Identities = 283/394 (71%), Positives = 317/394 (80%), Gaps = 2/394 (0%)
 Frame = +1

Query: 658  PQPTLDRRYSRIADQYNSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRKSLH 837
            P+  LDRRYSRIAD Y+SL+QVTEALA AGLESSNLIVGIDFTKSNEWTGA+SFNRKSLH
Sbjct: 77   PKKRLDRRYSRIADDYSSLDQVTEALAHAGLESSNLIVGIDFTKSNEWTGAKSFNRKSLH 136

Query: 838  HIGDVGNPYEQAISIIGRTLSGFDEDNLIPCFGFGDATTHDRDVFSFYPD-GRHCNGFEE 1014
            HIGD  NPY+QAI+IIG+TL+ FD+DNLIPC+GFGDA+THD+DVFSFYPD GR+CNGFEE
Sbjct: 137  HIGDGLNPYQQAIAIIGKTLAAFDDDNLIPCYGFGDASTHDQDVFSFYPDEGRYCNGFEE 196

Query: 1015 ALVRYREIVPQLRLAGPTSFAPVIEMAMSIVEESGGQYHVLVIIADGQVTRSVDTEHGQL 1194
             L RYREIVP LRLAGPTSFAPVIEMAM+IVE+SGGQYHVL+IIADGQVTRSVDTE G+L
Sbjct: 197  VLSRYREIVPNLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLLIIADGQVTRSVDTERGRL 256

Query: 1195 SPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMKEFDDNIPARAFDNFQFVNFTEIMSK 1374
            SPQEQKTVDAIV AS+YPLSIVLVGVGDGPWDMMKEFDDNIPAR FDNFQFVNFT IM+K
Sbjct: 257  SPQEQKTVDAIVAASKYPLSIVLVGVGDGPWDMMKEFDDNIPARDFDNFQFVNFTNIMAK 316

Query: 1375 NVPVHRKETEFALTALMEIPSQYKATIELKLLGRQTGSSPERFPLPPPVHXXXXXXXXXX 1554
            N P  RKETEFAL+ALMEIP QYKAT+EL LLGR+ G+SPER  LPPP++          
Sbjct: 317  NAPQTRKETEFALSALMEIPLQYKATLELNLLGRRRGTSPERVALPPPLYNARSLSNASS 376

Query: 1555 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDATFGTAPP-ESSAFDQQVCPICLSNP 1731
                                              +++ T P   +SA+D  +CPICL+N 
Sbjct: 377  FNYTKPSPEKSFQSSTPSYYGNSRDASTTPSAPSSSYDTGPTGATSAYDNLLCPICLTNN 436

Query: 1732 KDMAFGCGHQTCCDCGQSLQSCPICRSPIQTRIK 1833
            KDMAFGCGHQTCC+CGQ LQ+CPICRS IQTRIK
Sbjct: 437  KDMAFGCGHQTCCECGQDLQTCPICRSTIQTRIK 470


>ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 447

 Score =  567 bits (1461), Expect = e-159
 Identities = 290/411 (70%), Positives = 320/411 (77%), Gaps = 11/411 (2%)
 Frame = +1

Query: 634  PSTQNYGAPQPT---------LDRRYSRIADQYNSLEQVTEALARAGLESSNLIVGIDFT 786
            PS Q Y + Q           LDRRYSRIAD YNSLE+VTEALARAGLESSNLIVGIDFT
Sbjct: 44   PSQQYYTSSQECYGNVDNGRRLDRRYSRIADNYNSLEEVTEALARAGLESSNLIVGIDFT 103

Query: 787  KSNEWTGARSFNRKSLHHIGDVGNPYEQAISIIGRTLSGFDEDNLIPCFGFGDATTHDRD 966
            KSNEWTGARSFNR+SLHHIGD  NPY+QAISIIG+TL+ FD+DNLIPCFGFGDA+THD+D
Sbjct: 104  KSNEWTGARSFNRRSLHHIGDQPNPYQQAISIIGKTLAAFDDDNLIPCFGFGDASTHDQD 163

Query: 967  VFSFYPDG-RHCNGFEEALVRYREIVPQLRLAGPTSFAPVIEMAMSIVEESGGQYHVLVI 1143
            VFSF+P+  R CNGFEE L RY+EI P LRLAGPTSFAPVIEMAM+IVE+SGGQYHVL+I
Sbjct: 164  VFSFFPEEERFCNGFEEVLNRYQEIAPHLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLLI 223

Query: 1144 IADGQVTRSVDTEHGQLSPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMKEFDDNIPA 1323
            IADGQVTRSVDTE G+LSPQEQKTVDAIV+AS++PLSIVLVGVGDGPWDMM+EFDDNIP+
Sbjct: 224  IADGQVTRSVDTERGRLSPQEQKTVDAIVEASKFPLSIVLVGVGDGPWDMMREFDDNIPS 283

Query: 1324 RAFDNFQFVNFTEIMSKNVPVHRKETEFALTALMEIPSQYKATIELKLLGRQTGSSPERF 1503
            RAFDNFQFVNFTEIMSKN+P  RKETEFAL ALMEIPSQYKATIEL +LG + G SP+R 
Sbjct: 284  RAFDNFQFVNFTEIMSKNIPTSRKETEFALAALMEIPSQYKATIELDILGGRKGVSPQRV 343

Query: 1504 PLPPPVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDATFGTAPP- 1680
             LPPPV+                                                TAPP 
Sbjct: 344  ALPPPVY---------GAASLNSSKSFSNSKPTWSSSYEPSVPSFSVNRNPTPTSTAPPV 394

Query: 1681 ESSAFDQQVCPICLSNPKDMAFGCGHQTCCDCGQSLQSCPICRSPIQTRIK 1833
             SS +D QVCPICL+NPKDMAFGCGHQTCC+CGQ LQ+CPICRS I TRIK
Sbjct: 395  ASSTYDNQVCPICLTNPKDMAFGCGHQTCCECGQDLQTCPICRSTIHTRIK 445


>ref|XP_002873665.1| hypothetical protein ARALYDRAFT_488284 [Arabidopsis lyrata subsp.
            lyrata] gi|297319502|gb|EFH49924.1| hypothetical protein
            ARALYDRAFT_488284 [Arabidopsis lyrata subsp. lyrata]
          Length = 466

 Score =  565 bits (1456), Expect = e-158
 Identities = 283/402 (70%), Positives = 319/402 (79%), Gaps = 1/402 (0%)
 Frame = +1

Query: 631  APSTQNYGAP-QPTLDRRYSRIADQYNSLEQVTEALARAGLESSNLIVGIDFTKSNEWTG 807
            AP +Q+YG+  +  L+R+YS+I+D Y+SLEQVTEALARAGLESSNLIVGIDFTKSNEWTG
Sbjct: 75   APPSQSYGSDNKKRLERKYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTG 134

Query: 808  ARSFNRKSLHHIGDVGNPYEQAISIIGRTLSGFDEDNLIPCFGFGDATTHDRDVFSFYPD 987
            ARSFNRKSLH IG   NPYEQAI+IIGRTL+ FDEDNLIPC+GFGDA+THD+DVFSF  +
Sbjct: 135  ARSFNRKSLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFNSE 194

Query: 988  GRHCNGFEEALVRYREIVPQLRLAGPTSFAPVIEMAMSIVEESGGQYHVLVIIADGQVTR 1167
             R CNGFEE L RY+EIVPQL+LAGPTSFAP+I+MAM+IVE+SGGQYHVLVIIADGQVTR
Sbjct: 195  DRFCNGFEEVLARYKEIVPQLKLAGPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQVTR 254

Query: 1168 SVDTEHGQLSPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMKEFDDNIPARAFDNFQF 1347
            SVDTE+G+LSPQEQKTVDAIV+AS+ PLSIVLVGVGDGPWDMM+EFDDNIP+RAFDNFQF
Sbjct: 255  SVDTENGRLSPQEQKTVDAIVQASKLPLSIVLVGVGDGPWDMMREFDDNIPSRAFDNFQF 314

Query: 1348 VNFTEIMSKNVPVHRKETEFALTALMEIPSQYKATIELKLLGRQTGSSPERFPLPPPVHX 1527
            VNFTEIM+KN     KETEFAL+ALMEIP QYKATIEL LLGR+ G+ PERFPLPPPVH 
Sbjct: 315  VNFTEIMAKNKAQSLKETEFALSALMEIPQQYKATIELNLLGRRNGNIPERFPLPPPVHG 374

Query: 1528 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDATFGTAPPESSAFDQQV 1707
                                                        +    PP +SA D Q+
Sbjct: 375  GSSSYNSPKPFRPPSFKPSVPPHPTEESYHV------------RSSPVPPPTNSASDNQL 422

Query: 1708 CPICLSNPKDMAFGCGHQTCCDCGQSLQSCPICRSPIQTRIK 1833
            CPICLSNPKDMAFGCGHQTCC+CG  LQ CPICR+PI TRIK
Sbjct: 423  CPICLSNPKDMAFGCGHQTCCECGPGLQMCPICRAPIHTRIK 464


>ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Vitis vinifera]
            gi|296087586|emb|CBI34842.3| unnamed protein product
            [Vitis vinifera]
          Length = 461

 Score =  565 bits (1455), Expect = e-158
 Identities = 285/410 (69%), Positives = 319/410 (77%), Gaps = 7/410 (1%)
 Frame = +1

Query: 625  SYAPSTQNYGAPQPT------LDRRYSRIADQYNSLEQVTEALARAGLESSNLIVGIDFT 786
            S+ P  QNY + Q        L+R YSRIAD Y SL++VT ALARAGLESSNLIVGIDFT
Sbjct: 65   SHEPPQQNYSSSQGNGDNRRRLERMYSRIADDYRSLDEVTAALARAGLESSNLIVGIDFT 124

Query: 787  KSNEWTGARSFNRKSLHHIGDVGNPYEQAISIIGRTLSGFDEDNLIPCFGFGDATTHDRD 966
            KSNEWTGARSFNR+SLHH+GD  NPY+QAISIIG+TL+ FDEDN+IPCFGFGDA+THD+D
Sbjct: 125  KSNEWTGARSFNRQSLHHVGDGLNPYQQAISIIGKTLAAFDEDNMIPCFGFGDASTHDQD 184

Query: 967  VFSFYPDGRHCNGFEEALVRYREIVPQLRLAGPTSFAPVIEMAMSIVEESGGQYHVLVII 1146
            VFSFY D R CNGFEE L RYREIVP+LRLAGPTSFAP+IEMAM+IV  SGGQYHVLVII
Sbjct: 185  VFSFYEDERFCNGFEEVLSRYREIVPRLRLAGPTSFAPIIEMAMTIVNHSGGQYHVLVII 244

Query: 1147 ADGQVTRSVDTEHGQLSPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMKEFDDNIPAR 1326
            ADGQVTRSVDT HGQLSPQEQKTV+AIV+AS+ PLSI+LVGVGDGPWDMM+EFDDNIPAR
Sbjct: 245  ADGQVTRSVDTAHGQLSPQEQKTVEAIVEASKLPLSIILVGVGDGPWDMMREFDDNIPAR 304

Query: 1327 AFDNFQFVNFTEIMSKNVPVHRKETEFALTALMEIPSQYKATIELKLLGRQTGSSPERFP 1506
            AFDNFQFVNFTEIMSKNV + RKETEFAL ALMEIPSQYKATIEL +LG + G +PER P
Sbjct: 305  AFDNFQFVNFTEIMSKNVDLSRKETEFALAALMEIPSQYKATIELNILGGRKGDAPERVP 364

Query: 1507 LPPPVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDATFGTAPP-E 1683
            LP P++                                            +  GTAPP  
Sbjct: 365  LPTPMY---------------YGATSFFNSSKPSRTTSFQPSVPPYPEDSSPVGTAPPAT 409

Query: 1684 SSAFDQQVCPICLSNPKDMAFGCGHQTCCDCGQSLQSCPICRSPIQTRIK 1833
            SS FD Q+CPICL+N K+MAFGCGHQTCC+CG  L++CPICRSPIQTRIK
Sbjct: 410  SSTFDNQLCPICLTNVKNMAFGCGHQTCCECGPDLETCPICRSPIQTRIK 459