BLASTX nr result

ID: Cimicifuga21_contig00004348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004348
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163696.1| PREDICTED: villin-3-like [Cucumis sativus]         61   8e-08
ref|XP_004149401.1| PREDICTED: villin-2-like [Cucumis sativus]         61   8e-08
ref|XP_002878148.1| hypothetical protein ARALYDRAFT_486186 [Arab...    61   1e-07
ref|XP_004143215.1| PREDICTED: villin-1-like [Cucumis sativus] g...    60   2e-07
ref|XP_002268471.2| PREDICTED: LOW QUALITY PROTEIN: villin-4 [Vi...    60   2e-07

>ref|XP_004163696.1| PREDICTED: villin-3-like [Cucumis sativus]
          Length = 243

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = -3

Query: 346 KREAYLLAEEFEQKFGMRKEVFYKMPLWKQQMLKKKLDMF 227
           +REAYL  EEFE  FGM KE FYK+P WKQ M KKK+D+F
Sbjct: 204 RREAYLSMEEFETVFGMAKEAFYKLPKWKQDMQKKKVDLF 243


>ref|XP_004149401.1| PREDICTED: villin-2-like [Cucumis sativus]
          Length = 945

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = -3

Query: 346  KREAYLLAEEFEQKFGMRKEVFYKMPLWKQQMLKKKLDMF 227
            +REAYL  EEFE  FGM KE FYK+P WKQ M KKK+D+F
Sbjct: 906  RREAYLSMEEFETVFGMAKEAFYKLPKWKQDMQKKKVDLF 945


>ref|XP_002878148.1| hypothetical protein ARALYDRAFT_486186 [Arabidopsis lyrata subsp.
            lyrata] gi|297323986|gb|EFH54407.1| hypothetical protein
            ARALYDRAFT_486186 [Arabidopsis lyrata subsp. lyrata]
          Length = 965

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = -3

Query: 346  KREAYLLAEEFEQKFGMRKEVFYKMPLWKQQMLKKKLDMF 227
            +REAYL  EEF+  FGM KE FYK+P WKQ +LKKK D+F
Sbjct: 926  RREAYLSEEEFKTVFGMEKEAFYKLPRWKQDLLKKKFDLF 965


>ref|XP_004143215.1| PREDICTED: villin-1-like [Cucumis sativus]
           gi|449526423|ref|XP_004170213.1| PREDICTED:
           villin-1-like [Cucumis sativus]
          Length = 904

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/41 (65%), Positives = 30/41 (73%)
 Frame = -3

Query: 349 TKREAYLLAEEFEQKFGMRKEVFYKMPLWKQQMLKKKLDMF 227
           TKREAYL  EEFE+KFGM K  FYK+P WKQ  LK  L +F
Sbjct: 864 TKREAYLSIEEFEEKFGMEKTTFYKLPKWKQNKLKMTLHLF 904


>ref|XP_002268471.2| PREDICTED: LOW QUALITY PROTEIN: villin-4 [Vitis vinifera]
          Length = 1002

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/41 (63%), Positives = 30/41 (73%)
 Frame = -3

Query: 349  TKREAYLLAEEFEQKFGMRKEVFYKMPLWKQQMLKKKLDMF 227
            TKRE YL +EEF QKFGM K+ FYK+P WKQ  LK  L +F
Sbjct: 962  TKRETYLSSEEFRQKFGMTKDAFYKLPKWKQNKLKMALQLF 1002


Top