BLASTX nr result

ID: Cimicifuga21_contig00004325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004325
         (3227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16839.3| unnamed protein product [Vitis vinifera]              111   1e-21
ref|XP_002515032.1| hypothetical protein RCOM_1082870 [Ricinus c...    77   3e-11

>emb|CBI16839.3| unnamed protein product [Vitis vinifera]
          Length = 1309

 Score =  111 bits (278), Expect = 1e-21
 Identities = 163/648 (25%), Positives = 257/648 (39%), Gaps = 53/648 (8%)
 Frame = -1

Query: 2108 DDNDKNEGEKALLQDEGPKMTPEAMNTMS-------NIKGVDVSVKSFDAVGATEVRDPX 1950
            D  DK+EGEK +  +  P         +S       N+K V  S K  DA    E + P 
Sbjct: 614  DQTDKSEGEKEMSLNNDPNGMLSEKCRLSRFDGSEMNMKEVIASSKLLDASVGMEHQKPA 673

Query: 1949 XXXXXXXXXXXXXXXXXKVLTSGIEYVESAGDAIQLISESHEAPVRNCPSIETKKEDNIL 1770
                               + S +E+ +   +     +E H A   N  S E  K ++IL
Sbjct: 674  VKRKKSKKAKNSVEGTP--VGSNMEHAKDTLNGFAS-TEPHNAFNGNHSSNEADKGESIL 730

Query: 1769 SLTEGQKASEVESLNTPSLGFDDKDYQGSGHEDRSLQLAHTQIVRAQEITDNIDDKVKRK 1590
            S TE  +  + +  NT  LG D +    SG+E  S  L H  I + Q  T+++ D   RK
Sbjct: 731  SQTERTEVLKTKVKNTSLLGVDREIDAMSGNEMESFHLTH--ISKTQVNTEDMADVKVRK 788

Query: 1589 SIKPPASTSNTGMNLGIKQ-QVGNIEDPPISTKGNKEEEXXXXXXXXXXXXXXXXXXXXS 1413
              K  +ST+    +L  K+  VG    P +ST    + +                     
Sbjct: 789  KTKKQSSTAKNLSDLQKKELDVG----PEVSTSSTHKIKVDVPSKIKRKTKSVKTSSTNQ 844

Query: 1412 YDMAP-EAENGSGFGSEPLQLHQLSGIVGSSQTPSN----------AVKYNVGGQSL--- 1275
            +  +  E E  +    E L   Q  G   SSQ PS+           ++ NV G  L   
Sbjct: 845  FKRSKLETEKDAATEVESLHPKQDPGTFDSSQIPSSYALENNPVGRPLEANVDGNLLKLA 904

Query: 1274 -VNGSGDEAKVPKSDGDEVNFRHYFVPKNENHELVAVASKQPVQKDAQQRENDNELRVKK 1098
             +N + D  +V     D VN     +P+   H++VA A +    +D + + ++   +  K
Sbjct: 905  CINEANDHKEVSSCQSDMVN-----MPRQSLHKVVAPA-QVLADEDTKVKRSERVSKTNK 958

Query: 1097 KTDTHNVHSVGTT-ELEKPHDSINNQGHKKKTQSGTFDTSQLQ-------RSKSKPHSNE 942
                 NV SV T+ +L+    +  +Q  +KK++      +QLQ        +K  P S  
Sbjct: 959  NKKMSNVDSVATSRDLQNSLKTNKSQDVEKKSEG----DNQLQDPLSVDGHNKLMPESVS 1014

Query: 941  NVSVTAGERLKTTLNEVHKVETFPDKVSRNKLVGSSEDIKSQRTLQFRSPSSGVDTSTKL 762
              S  +   LK+  +++ K +T P+++    +V +S    +       +  + + TS+  
Sbjct: 1015 KFSKVSRNDLKSP-HDIGKFDTIPEEIRWPNVVNASGTSSTAHAFLKENGKASLSTSSSD 1073

Query: 761  NS--------------------VAARKPYIKKTGDVFNSSQDRKSFLXXXXXXXXXXXXX 642
            +S                    V  RK   K  G+V NSS  RKS L             
Sbjct: 1074 SSEDRTYQNKRGKRQSNLDRYRVTVRKAPRKNPGEVVNSSHQRKSLL------ATYGSIF 1127

Query: 641  XXXXXDQGEKHN--XXXXXXXXXXXXXXXXXXXSEGEREVKLNSSGNGSYGLKVMDNGGN 468
                 +  E H+                     +EGE    L+SS +G Y  K  ++G  
Sbjct: 1128 NDGGSESSEDHDGVENSDASTRTPSDSSASSDYTEGENNQHLDSS-HGLYSTKRNESGAK 1186

Query: 467  RSIKSKNAARKDMDLDAILRSSRSYKKAKLSASQSQPLEETESQPIHF 324
               KS ++  K++ +D ILRSS  +KKAKL+ASQS+ L +TESQ  HF
Sbjct: 1187 SIGKSNSSGSKNVTMDVILRSSSRFKKAKLTASQSE-LNDTESQ--HF 1231


>ref|XP_002515032.1| hypothetical protein RCOM_1082870 [Ricinus communis]
            gi|223546083|gb|EEF47586.1| hypothetical protein
            RCOM_1082870 [Ricinus communis]
          Length = 1078

 Score = 77.0 bits (188), Expect = 3e-11
 Identities = 128/544 (23%), Positives = 215/544 (39%), Gaps = 17/544 (3%)
 Frame = -1

Query: 1889 TSGIEYVESAGDAIQLISESHEAPVRNCPSIETKKEDNILSLTEGQKASEVESLNTPSLG 1710
            TS IE+VE         ++ H+A   +       KE++ +   EG++ SE+E+  + SL 
Sbjct: 604  TSVIEHVEGFVSGTSP-TKPHKATNGDHSGDNVNKEESNVPPKEGKEVSEMET--SASLL 660

Query: 1709 FDDKDYQGSGHEDRSLQLAHTQIVRAQEITDNIDDKVKRKSIKPPASTSNTGMNLGIKQQ 1530
              +K+        R+   +  QI + +   +N+D K ++K+ K    TS+      +K +
Sbjct: 661  ATEKEIDDV---IRNAMESVQQIGQVEVSAENMDGKSRKKTKKK--GTSDVKDLPELKNE 715

Query: 1529 VGNIEDPPISTKGNKEEEXXXXXXXXXXXXXXXXXXXXSYDMAPEAENGSGFGSEPLQLH 1350
               +  P     GNK  E                        A  + NG      PL+  
Sbjct: 716  NEKLSAPA----GNKIRE------------------------AEYSSNG------PLKSQ 741

Query: 1349 QLSGIVGSSQTPSNAVKYNVGGQSL---VNGSGDEAKVP---------KSDGDEVNFRHY 1206
                   SSQ   +  K N  G+ L   VNG+  ++              +   +NF++Y
Sbjct: 742  -------SSQGQPHKTKSNREGRCLEAAVNGNPSKSGHAIEGTCNLDVSCESSGINFKNY 794

Query: 1205 FVPKNENHELVAVASKQPVQKDAQQRENDNELRVKKKTDTHNVHSVGTT-ELEKPHDSIN 1029
            FVP+ +++++V  + +  V K  +  E   E++  +       HS G + +L+  +    
Sbjct: 795  FVPRQQSNKIVG-SDEALVDKATKTMEAYGEMKGNENKKKLGAHSHGPSPDLQNSYSLTE 853

Query: 1028 NQG---HKKKTQSGTFDTSQLQRSKSKPHSNENVSVTAGERLKTTLNEVHKVETFPDKVS 858
            + G      K            +S     ++EN   T    LK +    H         +
Sbjct: 854  DHGVGAKPLKVSDSEVKAPLPSKSDKLDSASEN---TRSNALKPSATSTH---------A 901

Query: 857  RNKLVGSSEDIKSQRTLQFRSPS-SGVDTSTKLNSVAARKPYIKKTGDVFNSSQDRKSFL 681
            +NK  GS   ++S +   F +   +G       N + +R+     + +V N SQ ++S +
Sbjct: 902  KNKKAGSVSSLESSKDTNFLNRRVNGPQLHEDDNRMNSRRTSTINSREVVNGSQHKRSLI 961

Query: 680  XXXXXXXXXXXXXXXXXXDQGEKHNXXXXXXXXXXXXXXXXXXXSEGEREVKLNSSGNGS 501
                                    +                   S+GE     NS  NGS
Sbjct: 962  GVSDSIFKDVTDEA------SSTEDDNSDASTRTPSDKSLSSDYSDGESNADFNSPLNGS 1015

Query: 500  YGLKVMDNGGNRSIKSKNAARKDMDLDAILRSSRSYKKAKLSASQSQPLEETESQPIHFN 321
               K  D GG ++I+   ++   + LDAILRSS  YKKAKL+A+Q Q LE+TESQP+ F 
Sbjct: 1016 NSCKRKD-GGQKTIRKPLSS--GLTLDAILRSSSRYKKAKLTAAQLQ-LEDTESQPVEFV 1071

Query: 320  LDSQ 309
             DSQ
Sbjct: 1072 PDSQ 1075


Top