BLASTX nr result

ID: Cimicifuga21_contig00004324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004324
         (1562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002868960.1| hypothetical protein ARALYDRAFT_912541 [Arab...    61   9e-07

>ref|XP_002868960.1| hypothetical protein ARALYDRAFT_912541 [Arabidopsis lyrata subsp.
            lyrata] gi|297314796|gb|EFH45219.1| hypothetical protein
            ARALYDRAFT_912541 [Arabidopsis lyrata subsp. lyrata]
          Length = 428

 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
 Frame = -2

Query: 1084 IYFLGGLYIKSNRTRYSDGVYAFDTKNKSWALGSKRMLSARACAKAVTLDNKIYVFGSFG 905
            IY +GG +IK   TR SD V+  D +  +W      M  ARACA    ++ KIYVFG   
Sbjct: 131  IYVIGG-FIKET-TRTSD-VWLLDCRTHTWRQVPS-MGVARACAAVGVVNGKIYVFGG-- 184

Query: 904  GFCNFLQPEEWGECYNIDTNEWTPLPPPPTEVHSSYHVTSAIVYNGDTILLCFPLLRAAY 725
              C       W E ++  T  W  LPP P  +    ++  ++V  G+ I     + R  Y
Sbjct: 185  --CLDPDSSNWAEVFDPKTQTWDSLPPMPDRIKRDQYIHDSVVVRGEKIYAVDGIDR-TY 241

Query: 724  SFHPGTGAW-KSHDVP 680
             + P  G W + +D P
Sbjct: 242  CYSPCEGKWGRGNDAP 257


Top