BLASTX nr result
ID: Cimicifuga21_contig00004313
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00004313 (205 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002981454.1| hypothetical protein SELMODRAFT_154507 [Sela... 72 1e-16 ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts... 87 2e-15 emb|CBI31526.3| unnamed protein product [Vitis vinifera] 87 2e-15 ref|XP_002969984.1| hypothetical protein SELMODRAFT_440923 [Sela... 72 1e-14 ref|XP_002315268.1| predicted protein [Populus trichocarpa] gi|2... 84 2e-14 >ref|XP_002981454.1| hypothetical protein SELMODRAFT_154507 [Selaginella moellendorffii] gi|300150994|gb|EFJ17642.1| hypothetical protein SELMODRAFT_154507 [Selaginella moellendorffii] Length = 1142 Score = 72.0 bits (175), Expect(2) = 1e-16 Identities = 32/46 (69%), Positives = 39/46 (84%) Frame = -3 Query: 140 SPIVHVLRQLRKLPWSECEPYLRKCFMKVHRGQYSQVYLVASLTAG 3 S I +LRQLRK+PW ECE Y+ KCFMKVH+ +Y+QV+LVASLTAG Sbjct: 653 SSIERILRQLRKMPWDECEDYVLKCFMKVHKIKYNQVHLVASLTAG 698 Score = 38.9 bits (89), Expect(2) = 1e-16 Identities = 19/23 (82%), Positives = 19/23 (82%) Frame = -2 Query: 204 VSKTRPPLH*YIRKLLFTDLDKS 136 VSK RP LH YIRKLLF DLDKS Sbjct: 631 VSKVRPLLHQYIRKLLFLDLDKS 653 >ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts 2-like [Vitis vinifera] Length = 1222 Score = 86.7 bits (213), Expect = 2e-15 Identities = 40/57 (70%), Positives = 46/57 (80%) Frame = -3 Query: 173 ISESCFSQTWTSPIVHVLRQLRKLPWSECEPYLRKCFMKVHRGQYSQVYLVASLTAG 3 I + FS S I HVLRQLRKLPWSECEPYL KCFMKVHRG+Y Q++L+ASLT+G Sbjct: 709 IRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTSG 765 >emb|CBI31526.3| unnamed protein product [Vitis vinifera] Length = 1193 Score = 86.7 bits (213), Expect = 2e-15 Identities = 40/57 (70%), Positives = 46/57 (80%) Frame = -3 Query: 173 ISESCFSQTWTSPIVHVLRQLRKLPWSECEPYLRKCFMKVHRGQYSQVYLVASLTAG 3 I + FS S I HVLRQLRKLPWSECEPYL KCFMKVHRG+Y Q++L+ASLT+G Sbjct: 680 IRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTSG 736 >ref|XP_002969984.1| hypothetical protein SELMODRAFT_440923 [Selaginella moellendorffii] gi|300162495|gb|EFJ29108.1| hypothetical protein SELMODRAFT_440923 [Selaginella moellendorffii] Length = 1180 Score = 72.0 bits (175), Expect(2) = 1e-14 Identities = 32/46 (69%), Positives = 39/46 (84%) Frame = -3 Query: 140 SPIVHVLRQLRKLPWSECEPYLRKCFMKVHRGQYSQVYLVASLTAG 3 S I +LRQLRK+PW ECE Y+ KCFMKVH+ +Y+QV+LVASLTAG Sbjct: 691 SSIERILRQLRKMPWDECEDYVLKCFMKVHKIKYNQVHLVASLTAG 736 Score = 32.0 bits (71), Expect(2) = 1e-14 Identities = 19/30 (63%), Positives = 19/30 (63%), Gaps = 7/30 (23%) Frame = -2 Query: 204 VSKTRPPLH*-------YIRKLLFTDLDKS 136 VSK RP LH YIRKLLF DLDKS Sbjct: 662 VSKVRPLLHQRMWSSLQYIRKLLFLDLDKS 691 >ref|XP_002315268.1| predicted protein [Populus trichocarpa] gi|222864308|gb|EEF01439.1| predicted protein [Populus trichocarpa] Length = 1194 Score = 83.6 bits (205), Expect = 2e-14 Identities = 39/57 (68%), Positives = 45/57 (78%) Frame = -3 Query: 173 ISESCFSQTWTSPIVHVLRQLRKLPWSECEPYLRKCFMKVHRGQYSQVYLVASLTAG 3 I + FS S I HVLRQLRKLPWSECE YL KCFMKVH+G+Y Q++L+ASLTAG Sbjct: 680 IRKLLFSDLDKSSIEHVLRQLRKLPWSECEAYLLKCFMKVHKGKYGQIHLIASLTAG 736