BLASTX nr result

ID: Cimicifuga21_contig00004313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004313
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002981454.1| hypothetical protein SELMODRAFT_154507 [Sela...    72   1e-16
ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts...    87   2e-15
emb|CBI31526.3| unnamed protein product [Vitis vinifera]               87   2e-15
ref|XP_002969984.1| hypothetical protein SELMODRAFT_440923 [Sela...    72   1e-14
ref|XP_002315268.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14

>ref|XP_002981454.1| hypothetical protein SELMODRAFT_154507 [Selaginella moellendorffii]
           gi|300150994|gb|EFJ17642.1| hypothetical protein
           SELMODRAFT_154507 [Selaginella moellendorffii]
          Length = 1142

 Score = 72.0 bits (175), Expect(2) = 1e-16
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = -3

Query: 140 SPIVHVLRQLRKLPWSECEPYLRKCFMKVHRGQYSQVYLVASLTAG 3
           S I  +LRQLRK+PW ECE Y+ KCFMKVH+ +Y+QV+LVASLTAG
Sbjct: 653 SSIERILRQLRKMPWDECEDYVLKCFMKVHKIKYNQVHLVASLTAG 698



 Score = 38.9 bits (89), Expect(2) = 1e-16
 Identities = 19/23 (82%), Positives = 19/23 (82%)
 Frame = -2

Query: 204 VSKTRPPLH*YIRKLLFTDLDKS 136
           VSK RP LH YIRKLLF DLDKS
Sbjct: 631 VSKVRPLLHQYIRKLLFLDLDKS 653


>ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts 2-like [Vitis
           vinifera]
          Length = 1222

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/57 (70%), Positives = 46/57 (80%)
 Frame = -3

Query: 173 ISESCFSQTWTSPIVHVLRQLRKLPWSECEPYLRKCFMKVHRGQYSQVYLVASLTAG 3
           I +  FS    S I HVLRQLRKLPWSECEPYL KCFMKVHRG+Y Q++L+ASLT+G
Sbjct: 709 IRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTSG 765


>emb|CBI31526.3| unnamed protein product [Vitis vinifera]
          Length = 1193

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/57 (70%), Positives = 46/57 (80%)
 Frame = -3

Query: 173 ISESCFSQTWTSPIVHVLRQLRKLPWSECEPYLRKCFMKVHRGQYSQVYLVASLTAG 3
           I +  FS    S I HVLRQLRKLPWSECEPYL KCFMKVHRG+Y Q++L+ASLT+G
Sbjct: 680 IRKLLFSDLDKSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTSG 736


>ref|XP_002969984.1| hypothetical protein SELMODRAFT_440923 [Selaginella moellendorffii]
           gi|300162495|gb|EFJ29108.1| hypothetical protein
           SELMODRAFT_440923 [Selaginella moellendorffii]
          Length = 1180

 Score = 72.0 bits (175), Expect(2) = 1e-14
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = -3

Query: 140 SPIVHVLRQLRKLPWSECEPYLRKCFMKVHRGQYSQVYLVASLTAG 3
           S I  +LRQLRK+PW ECE Y+ KCFMKVH+ +Y+QV+LVASLTAG
Sbjct: 691 SSIERILRQLRKMPWDECEDYVLKCFMKVHKIKYNQVHLVASLTAG 736



 Score = 32.0 bits (71), Expect(2) = 1e-14
 Identities = 19/30 (63%), Positives = 19/30 (63%), Gaps = 7/30 (23%)
 Frame = -2

Query: 204 VSKTRPPLH*-------YIRKLLFTDLDKS 136
           VSK RP LH        YIRKLLF DLDKS
Sbjct: 662 VSKVRPLLHQRMWSSLQYIRKLLFLDLDKS 691


>ref|XP_002315268.1| predicted protein [Populus trichocarpa] gi|222864308|gb|EEF01439.1|
           predicted protein [Populus trichocarpa]
          Length = 1194

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/57 (68%), Positives = 45/57 (78%)
 Frame = -3

Query: 173 ISESCFSQTWTSPIVHVLRQLRKLPWSECEPYLRKCFMKVHRGQYSQVYLVASLTAG 3
           I +  FS    S I HVLRQLRKLPWSECE YL KCFMKVH+G+Y Q++L+ASLTAG
Sbjct: 680 IRKLLFSDLDKSSIEHVLRQLRKLPWSECEAYLLKCFMKVHKGKYGQIHLIASLTAG 736


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