BLASTX nr result
ID: Cimicifuga21_contig00004311
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00004311
(1459 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts... 189 1e-45
emb|CBI31526.3| unnamed protein product [Vitis vinifera] 189 1e-45
ref|XP_002312048.1| predicted protein [Populus trichocarpa] gi|2... 189 1e-45
ref|XP_002315268.1| predicted protein [Populus trichocarpa] gi|2... 188 3e-45
ref|XP_002454211.1| hypothetical protein SORBIDRAFT_04g026740 [S... 181 4e-43
>ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts 2-like [Vitis vinifera]
Length = 1222
Score = 189 bits (481), Expect = 1e-45
Identities = 113/212 (53%), Positives = 120/212 (56%), Gaps = 33/212 (15%)
Frame = -3
Query: 626 QACLDDFTHHNIDVACNLLETGGRFLYISPETTIHMANMLEILMRLKSVKNLDPRHNTLV 447
+ACLDDFTHHNIDVACNLLET GRFLY SPETT+ MANMLEILMRLK+VKNLDPRH+TLV
Sbjct: 623 KACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLV 682
Query: 446 ENAYYLCKPPKRSA*VXXXXXXXXXXXXXXXXXXXXXXXXXLKHVHHCLSISESCFSQTS 267
ENAYYLCKPP+RSA V +H I + FS
Sbjct: 683 ENAYYLCKPPERSARVSKVRPP----------------------LHQ--YIRKLLFSDLD 718
Query: 266 TSPIEHVLRQLRKLPWSECEPYL*KCFMK------------------------------- 180
S IEHVLRQLRKLPWSECEPYL KCFMK
Sbjct: 719 KSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTSGLSRYHDDFAVSVV 778
Query: 179 --VLEEIRSRLELNDNNFQQTHSTHAFLRGAL 90
VLEEIR LELND QQ H G L
Sbjct: 779 DEVLEEIRLGLELNDYGMQQRRIAHMRFLGEL 810
Score = 74.3 bits (181), Expect = 7e-11
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -1
Query: 127 RRIAHMRFLGELYNFAHIDSSVIFVTLHLILAFGHGTPEQDV 2
RRIAHMRFLGELYN+ H+DSSVIF TL+LILAFGH T EQDV
Sbjct: 799 RRIAHMRFLGELYNYEHVDSSVIFDTLYLILAFGHETAEQDV 840
>emb|CBI31526.3| unnamed protein product [Vitis vinifera]
Length = 1193
Score = 189 bits (481), Expect = 1e-45
Identities = 113/212 (53%), Positives = 120/212 (56%), Gaps = 33/212 (15%)
Frame = -3
Query: 626 QACLDDFTHHNIDVACNLLETGGRFLYISPETTIHMANMLEILMRLKSVKNLDPRHNTLV 447
+ACLDDFTHHNIDVACNLLET GRFLY SPETT+ MANMLEILMRLK+VKNLDPRH+TLV
Sbjct: 594 KACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLV 653
Query: 446 ENAYYLCKPPKRSA*VXXXXXXXXXXXXXXXXXXXXXXXXXLKHVHHCLSISESCFSQTS 267
ENAYYLCKPP+RSA V +H I + FS
Sbjct: 654 ENAYYLCKPPERSARVSKVRPP----------------------LHQ--YIRKLLFSDLD 689
Query: 266 TSPIEHVLRQLRKLPWSECEPYL*KCFMK------------------------------- 180
S IEHVLRQLRKLPWSECEPYL KCFMK
Sbjct: 690 KSSIEHVLRQLRKLPWSECEPYLLKCFMKVHRGKYGQIHLIASLTSGLSRYHDDFAVSVV 749
Query: 179 --VLEEIRSRLELNDNNFQQTHSTHAFLRGAL 90
VLEEIR LELND QQ H G L
Sbjct: 750 DEVLEEIRLGLELNDYGMQQRRIAHMRFLGEL 781
Score = 74.3 bits (181), Expect = 7e-11
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -1
Query: 127 RRIAHMRFLGELYNFAHIDSSVIFVTLHLILAFGHGTPEQDV 2
RRIAHMRFLGELYN+ H+DSSVIF TL+LILAFGH T EQDV
Sbjct: 770 RRIAHMRFLGELYNYEHVDSSVIFDTLYLILAFGHETAEQDV 811
>ref|XP_002312048.1| predicted protein [Populus trichocarpa] gi|222851868|gb|EEE89415.1|
predicted protein [Populus trichocarpa]
Length = 638
Score = 189 bits (481), Expect = 1e-45
Identities = 115/239 (48%), Positives = 127/239 (53%), Gaps = 33/239 (13%)
Frame = -3
Query: 644 TTISFKQACLDDFTHHNIDVACNLLETGGRFLYISPETTIHMANMLEILMRLKSVKNLDP 465
T S +ACLDDFTHHNIDVACNLLET GRFLY +PETT+ MANMLEILMRLK+VKNLDP
Sbjct: 107 TVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRTPETTVRMANMLEILMRLKNVKNLDP 166
Query: 464 RHNTLVENAYYLCKPPKRSA*VXXXXXXXXXXXXXXXXXXXXXXXXXLKHVHHCLSISES 285
RH+TLVENAYYLCKPP+RSA V I +
Sbjct: 167 RHSTLVENAYYLCKPPERSARVSKVRPPLYQY------------------------IRKL 202
Query: 284 CFSQTSTSPIEHVLRQLRKLPWSECEPYL*KCFMK------------------------- 180
FS S IEHVLRQLRKLPWSECE YL KCFMK
Sbjct: 203 LFSDLDKSSIEHVLRQLRKLPWSECEAYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDE 262
Query: 179 --------VLEEIRSRLELNDNNFQQTHSTHAFLRGALQLCTYRFVCYFCNASFDSCFW 27
VLEEIR LELND QQ H G L Y + + F++ +W
Sbjct: 263 FAVAVVDEVLEEIRLGLELNDYGMQQRRIAHMRFLGEL----YNYEHVDSSVIFETLYW 317
Score = 73.9 bits (180), Expect = 1e-10
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = -1
Query: 127 RRIAHMRFLGELYNFAHIDSSVIFVTLHLILAFGHGTPEQDV 2
RRIAHMRFLGELYN+ H+DSSVIF TL+ IL FGH TPEQDV
Sbjct: 289 RRIAHMRFLGELYNYEHVDSSVIFETLYWILMFGHDTPEQDV 330
>ref|XP_002315268.1| predicted protein [Populus trichocarpa] gi|222864308|gb|EEF01439.1|
predicted protein [Populus trichocarpa]
Length = 1194
Score = 188 bits (478), Expect = 3e-45
Identities = 113/218 (51%), Positives = 119/218 (54%), Gaps = 33/218 (15%)
Frame = -3
Query: 644 TTISFKQACLDDFTHHNIDVACNLLETGGRFLYISPETTIHMANMLEILMRLKSVKNLDP 465
T S +ACLDDFTHHNIDVACNLLET GRFLY SPETT+ MANMLEILMRLK+VKNLDP
Sbjct: 588 TVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDP 647
Query: 464 RHNTLVENAYYLCKPPKRSA*VXXXXXXXXXXXXXXXXXXXXXXXXXLKHVHHCLSISES 285
RH+TLVENAYYLCKPP+RSA V I +
Sbjct: 648 RHSTLVENAYYLCKPPERSARVSKVRPPLYQY------------------------IRKL 683
Query: 284 CFSQTSTSPIEHVLRQLRKLPWSECEPYL*KCFMK------------------------- 180
FS S IEHVLRQLRKLPWSECE YL KCFMK
Sbjct: 684 LFSDLDKSSIEHVLRQLRKLPWSECEAYLLKCFMKVHKGKYGQIHLIASLTAGLSRYHDE 743
Query: 179 --------VLEEIRSRLELNDNNFQQTHSTHAFLRGAL 90
VLEEIR LELND QQ H G L
Sbjct: 744 FAVSVVDEVLEEIRLGLELNDYGMQQRRIAHMRFLGEL 781
Score = 76.3 bits (186), Expect = 2e-11
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -1
Query: 127 RRIAHMRFLGELYNFAHIDSSVIFVTLHLILAFGHGTPEQDV 2
RRIAHMRFLGELYN+ H+DSSVIF TL+LIL FGH TPEQDV
Sbjct: 770 RRIAHMRFLGELYNYEHVDSSVIFETLNLILVFGHDTPEQDV 811
>ref|XP_002454211.1| hypothetical protein SORBIDRAFT_04g026740 [Sorghum bicolor]
gi|241934042|gb|EES07187.1| hypothetical protein
SORBIDRAFT_04g026740 [Sorghum bicolor]
Length = 1193
Score = 181 bits (459), Expect = 4e-43
Identities = 107/212 (50%), Positives = 119/212 (56%), Gaps = 33/212 (15%)
Frame = -3
Query: 626 QACLDDFTHHNIDVACNLLETGGRFLYISPETTIHMANMLEILMRLKSVKNLDPRHNTLV 447
+ACLDDF+HHNIDVACNLLET GRFLY SPETTI MANMLEILMRLK+VKNLDPRH+TLV
Sbjct: 593 KACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTLV 652
Query: 446 ENAYYLCKPPKRSA*VXXXXXXXXXXXXXXXXXXXXXXXXXLKHVHHCLSISESCFSQTS 267
ENAYYLCKPP+RSA + +H I + FS
Sbjct: 653 ENAYYLCKPPERSARISKVRPP----------------------LHQ--YIRKLLFSDLD 688
Query: 266 TSPIEHVLRQLRKLPWSECEPYL*KCFMK------------------------------- 180
S +EHVLRQLRKLPW+EC+ YL KCF+K
Sbjct: 689 KSSVEHVLRQLRKLPWAECQQYLLKCFLKVHKGKYSQVHLIALLTASLSRYHDDFAVAVV 748
Query: 179 --VLEEIRSRLELNDNNFQQTHSTHAFLRGAL 90
VLEEIR LELND QQ H G L
Sbjct: 749 DEVLEEIRVGLELNDYGMQQRRLAHMRFLGEL 780
Score = 75.5 bits (184), Expect = 3e-11
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = -1
Query: 127 RRIAHMRFLGELYNFAHIDSSVIFVTLHLILAFGHGTPEQDV 2
RR+AHMRFLGELY++ HIDSSV+F TL+LI+ FGHGTPEQDV
Sbjct: 769 RRLAHMRFLGELYSYKHIDSSVVFDTLYLIIVFGHGTPEQDV 810