BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004302
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41573.1| unknown [Lotus japonicus]                               65   3e-08
ref|XP_002316055.1| f-box family protein [Populus trichocarpa] g...    65   3e-08
ref|XP_003605037.1| F-box family protein [Medicago truncatula] g...    65   4e-08
ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ...    65   4e-08
ref|NP_187487.1| F-box protein [Arabidopsis thaliana] gi|7533359...    64   6e-08

>gb|AFK41573.1| unknown [Lotus japonicus]
          Length = 360

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 62/236 (26%), Positives = 96/236 (40%), Gaps = 26/236 (11%)
 Frame = +1

Query: 88  PQELISDILLRLPADFLVQAKSVCKFFYDLISDRNFTHAHLIHHRQHPL----IHDYTGL 255
           P E++  IL RLP   L ++K+VCK +  L SD+ F   +    R++P+    I D +  
Sbjct: 10  PDEVVMQILARLPVKSLFRSKTVCKLWCRLSSDKYFVQLYNEVSRKNPMILVEISDTSES 69

Query: 256 KFKI--------YRELRDQLLKHEILFKAACDGLLLIQSKDDPNQLYVCNPITQRCTTLP 411
           K  +          E     L   +  +A+C+GLL   S  D    YVCNP+T+    LP
Sbjct: 70  KSSLICVDSLRGVSEFSLSFLNDRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREFRLLP 129

Query: 412 RLET--TCRIVSNWGLVSYGDIEDHPRSYKVVGVSLCSRRAFVFKP----------GITN 555
           R       R   +      G   D       V ++ C  R F  +P             +
Sbjct: 130 RSRERHVTRFYPDGEATLVGLACDSTCQRFNVVLAGC-HRTFGHRPDGSFICLVFDSELS 188

Query: 556 NWNEVNTGFPVSH--HLSQHSLTLVNKELHWLTTRLEAKCYKSYIYSVDAATEELR 717
            W +    F   H  H++++ +  VN  LHWLT         +YI  +D + +  R
Sbjct: 189 KWRKF-VSFQDDHFTHMNKNQVVFVNNALHWLTVS------STYILVLDLSCDNWR 237


>ref|XP_002316055.1| f-box family protein [Populus trichocarpa]
           gi|222865095|gb|EEF02226.1| f-box family protein
           [Populus trichocarpa]
          Length = 359

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
 Frame = +1

Query: 85  LPQELISDILLRLPADFLVQAKSVCKFFYDLISDRNFTHAHLIHHRQHPL----IHDYTG 252
           LP E+I  +L RLP   L +AK+VCK +Y L SD+ F   +     ++ +    + D   
Sbjct: 8   LPDEVIIQVLARLPVKSLFRAKTVCKLWYKLSSDKYFVQLYNEVATKNSMVLVEVSDSPE 67

Query: 253 LKFKI--------YRELRDQLLKHEILFKAACDGLLLIQSKDDPNQLYVCNPITQRCTTL 408
           LK  +          EL    LK  +  +A+C+GLL   S  D    YVCNP+T+    L
Sbjct: 68  LKSSLICADNLRGVSELSLDFLKDRVKVRASCNGLLCCSSIPDKGVYYVCNPMTREFRLL 127

Query: 409 PR 414
           PR
Sbjct: 128 PR 129


>ref|XP_003605037.1| F-box family protein [Medicago truncatula]
           gi|355506092|gb|AES87234.1| F-box family protein
           [Medicago truncatula]
          Length = 313

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 59/203 (29%), Positives = 85/203 (41%), Gaps = 2/203 (0%)
 Frame = +1

Query: 64  QEKRLLNLPQELISDILLRLPADFLVQAKSVCKFFYDLISDRNFTHAHLIHHRQHPLIHD 243
           ++K +L LP ELI  IL+RLP   L+  K VCK ++  ISD +F ++H            
Sbjct: 2   EKKTVLYLPHELIIQILMRLPVKSLICFKCVCKSWFSFISDPHFENSH------------ 49

Query: 244 YTGLKFKIYRELRDQLLKHEILFKAACDGLLLIQSKDDPNQLYVCNPITQRCTTLPRLET 423
                F++          H   F  +C G +L+     P  +++ NP T   T +P    
Sbjct: 50  -----FQL------ASATHTCRFLCSCRGFILLYR---PPNIHLWNPSTGFKTQIPVSPF 95

Query: 424 TCRIVSNWGLVSYGDIEDHPRSYKVVGVSLCSRRAFVFKPGITNNWNEV--NTGFPVSHH 597
             + +++     Y    D    Y VV  S  S    VF     N W E+  NT FP    
Sbjct: 96  DSKSIAHCHGFGYDQSRD---DYLVVEFSHVSSHLEVFS-FRDNTWKEIDGNTHFPYVVV 151

Query: 598 LSQHSLTLVNKELHWLTTRLEAK 666
            SQ    L N  +HWL  R + K
Sbjct: 152 PSQRKGFLFNGAIHWLAYRRDLK 174


>ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 414

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 83/368 (22%), Positives = 147/368 (39%), Gaps = 40/368 (10%)
 Frame = +1

Query: 76   LLNLPQELISDILLRLPADFLVQAKSVCKFFYDLISDRNFTHAHLIHHRQ---------- 225
            L  LP EL+++IL RLP D L++ +S+ K +   I D NF   HL   R+          
Sbjct: 2    LEKLPPELLTEILTRLPVDCLLRFRSISKSWCAKIDDPNFIKTHLKKSRETNSNLTLIFA 61

Query: 226  --HPLIHDYTGLKFKIYRELRDQLLK------------HEILFKAACDGLLLIQSKDDPN 363
              HP   DY    + +  +  + ++K            H I    +C+GLL   +     
Sbjct: 62   GSHP---DYF---YNVNLDSLNSIIKLENPIKGPTDASHNIKIVGSCNGLLCFGNAS--G 113

Query: 364  QLYVCNPITQRCTTLP--RLETTCRIVSNWGLVSYG-DIEDHPRSYKVVGVSL---CSRR 525
            ++ + NP T++   LP  R++ + +  S WG  ++G   +     YKV+ +      S +
Sbjct: 114  RITLMNPSTRKHKVLPFLRMDASVKGKSVWGAWAFGFGCDSVHDDYKVIRLGQYLDFSLQ 173

Query: 526  AFVFKPGI----TNNWNEVNTGFPVSHHLSQHSLTLVNKELHWLTTRLEAKCYKSYIYSV 693
             F     +    +N+W +++ G        Q    LV + LHWL +R         I ++
Sbjct: 174  QFETDTMVYSLKSNSWRKID-GMSCIIGFDQKMGVLVGEALHWLASRDRILLNPDVIVAL 232

Query: 694  DAATEELRLRETQVSLSITCRFDENSILE--VKXXXXXXXXXXXXXXXXIWTLHDC---- 855
            +   E+ R       + +    ++N  L   V                 IW + +     
Sbjct: 233  NLGVEDFREVPGPDVVVVGANPNQNPSLNLGVVEEWLSVFAIYNNTRLDIWVMKEYGAKD 292

Query: 856  QWTKKYSIVLASYKLNSFTHVYSYSRLTRSIILIHDDKNGLLFYDLEKKDSRRIDFPDKR 1035
             WT+ +S                +S+    ++L   DKN LL+Y + +K  +R++     
Sbjct: 293  SWTRLFSFTPNVVPFVKCLRTLVFSKNRDEVLLGLQDKN-LLWYKIREKRVKRVEIHIVV 351

Query: 1036 SLFTYYRF 1059
            +LFT   F
Sbjct: 352  TLFTMQVF 359


>ref|NP_187487.1| F-box protein [Arabidopsis thaliana]
           gi|75333597|sp|Q9C9Y4.1|FB136_ARATH RecName: Full=F-box
           protein At3g08750 gi|12322733|gb|AAG51357.1|AC012562_18
           hypothetical protein; 68748-67639 [Arabidopsis thaliana]
           gi|67633624|gb|AAY78736.1| F-box family protein
           [Arabidopsis thaliana] gi|332641152|gb|AEE74673.1| F-box
           protein [Arabidopsis thaliana]
          Length = 369

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
 Frame = +1

Query: 76  LLNLPQELISDILLRLPADFLVQAKSVCKFFYDLISDRNFTHAHLIHHRQHPLIHDYTGL 255
           L +LP ELI +IL ++PA+ L++ KS CK +Y+LI+++ F + HL H+     I  Y   
Sbjct: 9   LPSLPFELIEEILYKIPAESLIRFKSTCKKWYNLITEKRFMYNHLDHYSPERFIRTYDQQ 68

Query: 256 KFKIYRE-LRDQLLKHE------ILFKAACDGLLLIQSKDDPNQLYVCNPITQRCTTLPR 414
                 E L D L+  E      I     CDGL+L   +   N L V NP+ +    +  
Sbjct: 69  IIDPVTEILSDALIPDEFRDLYPIYSMVHCDGLMLCTCRKWDNSLAVWNPVLREIKWIK- 127

Query: 415 LETTCRIVSNWGLVSYGD--IEDHPRSYKVVG 504
             + C + +++  + Y D    D+ +  K++G
Sbjct: 128 -PSVCYLHTDYVGIGYDDNVSRDNYKILKLLG 158