BLASTX nr result

ID: Cimicifuga21_contig00004292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004292
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269295.1| PREDICTED: MADS-box protein SVP [Vitis vinif...   309   1e-81
gb|AFC96914.1| SVP-like MADS-box protein, partial [Vitis vinifera]    299   1e-78
ref|XP_003613086.1| MADS-box transcription factor [Medicago trun...   298   2e-78
ref|XP_003517407.1| PREDICTED: MADS-box protein SVP-like [Glycin...   296   5e-78
gb|ABD66219.2| JOINTLESS [Malus x domestica] gi|302398887|gb|ADL...   296   9e-78

>ref|XP_002269295.1| PREDICTED: MADS-box protein SVP [Vitis vinifera]
           gi|297744859|emb|CBI38273.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  309 bits (791), Expect = 1e-81
 Identities = 162/226 (71%), Positives = 195/226 (86%), Gaps = 8/226 (3%)
 Frame = +1

Query: 253 MARLKIQIKKIDNTTARQVTFSKRRRGLFKKAAELSILCDADVAVIVFSATGKLFEYSNL 432
           MAR KIQIKKIDN TARQVTFSKRRRGLFKKA ELS+LCDADVA+I+FS+TGKLFE+S+ 
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFSSS 60

Query: 433 NMKEILERHNLQSKNLQEMEQLSLDLQL-ENCNYARLSKEVAERSRQLRVMRGEELQGLN 609
           +MKEILE+H+LQSKNL+++EQ SL+LQL EN N++RLSKEVA++S +LR MRGEELQGLN
Sbjct: 61  SMKEILEKHSLQSKNLEKLEQPSLELQLVENNNHSRLSKEVADKSHKLRQMRGEELQGLN 120

Query: 610 IEELQQLEKSLETGFNRVLETKGERIVSEINTLQAKGMQLMEENERLRLQMVGVSI---- 777
           IE+LQQLEKSLE G +RV++ KGERI+ EI  LQ+KG+QLMEENERLR Q+V +S     
Sbjct: 121 IEDLQQLEKSLEAGLSRVIQKKGERIMKEITDLQSKGVQLMEENERLRQQVVEISNRRRQ 180

Query: 778 ---DTDNTVHEEGQSSESVTNIISSGGSPQDYDSSDTSLKLGQPFS 906
              D++N  HEEGQSSESVTN+ +S G PQDY+SSDTSLKLG P+S
Sbjct: 181 VAGDSENMFHEEGQSSESVTNVSNSNGPPQDYESSDTSLKLGLPYS 226


>gb|AFC96914.1| SVP-like MADS-box protein, partial [Vitis vinifera]
          Length = 240

 Score =  299 bits (765), Expect = 1e-78
 Identities = 157/222 (70%), Positives = 190/222 (85%), Gaps = 8/222 (3%)
 Frame = +1

Query: 253 MARLKIQIKKIDNTTARQVTFSKRRRGLFKKAAELSILCDADVAVIVFSATGKLFEYSNL 432
           MAR KIQIKKIDN TARQVTFSKRRRGLFKKA EL++LCDADVA+I+FS+TGKLFE+S+ 
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLFKKAEELAVLCDADVALIIFSSTGKLFEFSSS 60

Query: 433 NMKEILERHNLQSKNLQEMEQLSLDLQL-ENCNYARLSKEVAERSRQLRVMRGEELQGLN 609
           +MKEILE+H+LQSKNL+++EQ SL+LQL EN N++RLSKEVA++S +LR MRGEELQGLN
Sbjct: 61  SMKEILEKHSLQSKNLEKLEQPSLELQLVENNNHSRLSKEVADKSHKLRQMRGEELQGLN 120

Query: 610 IEELQQLEKSLETGFNRVLETKGERIVSEINTLQAKGMQLMEENERLRLQMVGVSI---- 777
           IE+LQQLEKSLE G +RV++ KGERI+ EI  LQ+KG+QLMEENERLR Q+V +S     
Sbjct: 121 IEDLQQLEKSLEAGLSRVIQKKGERIMKEITDLQSKGVQLMEENERLRQQVVEISNRRRQ 180

Query: 778 ---DTDNTVHEEGQSSESVTNIISSGGSPQDYDSSDTSLKLG 894
              D++N  HEEGQSSESVTN+ +S G PQDY+SSDTSL  G
Sbjct: 181 VAGDSENMFHEEGQSSESVTNVSNSNGPPQDYESSDTSLNWG 222


>ref|XP_003613086.1| MADS-box transcription factor [Medicago truncatula]
           gi|355514421|gb|AES96044.1| MADS-box transcription
           factor [Medicago truncatula]
          Length = 227

 Score =  298 bits (763), Expect = 2e-78
 Identities = 156/226 (69%), Positives = 190/226 (84%), Gaps = 8/226 (3%)
 Frame = +1

Query: 253 MARLKIQIKKIDNTTARQVTFSKRRRGLFKKAAELSILCDADVAVIVFSATGKLFEYSNL 432
           MAR KIQIKKI+N+TARQVTFSKRRRGL KKA ELS+LCDADVA+I+FS+TGKLFEYSNL
Sbjct: 1   MAREKIQIKKIENSTARQVTFSKRRRGLIKKAEELSVLCDADVALIIFSSTGKLFEYSNL 60

Query: 433 NMKEILERHNLQSKNLQEMEQLSLDLQL-ENCNYARLSKEVAERSRQLRVMRGEELQGLN 609
           +M+EILERH+L SKNL ++E+ SL+LQL EN N +RLSKEVA++S QLR MRGE+LQGL+
Sbjct: 61  SMREILERHHLHSKNLAKLEEPSLELQLVENSNCSRLSKEVAQKSHQLRQMRGEDLQGLS 120

Query: 610 IEELQQLEKSLETGFNRVLETKGERIVSEINTLQAKGMQLMEENERLRLQMVGV------ 771
           +EELQQLEKSLE G  RV+ETKGE+I+ EIN LQ KG QLMEEN RL+  + G+      
Sbjct: 121 LEELQQLEKSLEIGLGRVIETKGEKIMMEINELQTKGRQLMEENNRLKRHVSGMFNGKMF 180

Query: 772 -SIDTDNTVHEEGQSSESVTNIISSGGSPQDYDSSDTSLKLGQPFS 906
             ++++N V EEGQSSESVTN+ +S G PQDY+SSDTSLKLG P++
Sbjct: 181 GGVESENMVTEEGQSSESVTNVYNSTGPPQDYESSDTSLKLGLPYA 226


>ref|XP_003517407.1| PREDICTED: MADS-box protein SVP-like [Glycine max]
          Length = 227

 Score =  296 bits (759), Expect = 5e-78
 Identities = 159/226 (70%), Positives = 186/226 (82%), Gaps = 8/226 (3%)
 Frame = +1

Query: 253 MARLKIQIKKIDNTTARQVTFSKRRRGLFKKAAELSILCDADVAVIVFSATGKLFEYSNL 432
           MAR KIQIKKIDN TARQVTFSKRRRGLFKKA ELS+LCDADVA+I+FS+TGKLFEYS+ 
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYSSS 60

Query: 433 NMKEILERHNLQSKNLQEMEQLSLDLQL-ENCNYARLSKEVAERSRQLRVMRGEELQGLN 609
           +MKEILERH+L SKNL  MEQ SL+LQL EN N +RLSKEVAE+S QLR +RGE+LQGLN
Sbjct: 61  SMKEILERHHLHSKNLARMEQPSLELQLVENSNCSRLSKEVAEKSHQLRQLRGEDLQGLN 120

Query: 610 IEELQQLEKSLETGFNRVLETKGERIVSEINTLQAKGMQLMEENERLRLQMVGV------ 771
           IEELQQLE SLETG  R++E KGE+I+SEI  LQ KGM LMEENERL+  + G+      
Sbjct: 121 IEELQQLEMSLETGLGRIIEKKGEKIMSEIADLQRKGMLLMEENERLKRHVAGIINGQRH 180

Query: 772 -SIDTDNTVHEEGQSSESVTNIISSGGSPQDYDSSDTSLKLGQPFS 906
              +++N V +EGQSSESVT + +S G PQDY+SSDTSLKLG P+S
Sbjct: 181 GGAESENFVMDEGQSSESVTYVCNSTGLPQDYESSDTSLKLGLPYS 226


>gb|ABD66219.2| JOINTLESS [Malus x domestica] gi|302398887|gb|ADL36738.1| MADS
           domain class transcription factor [Malus x domestica]
          Length = 224

 Score =  296 bits (757), Expect = 9e-78
 Identities = 157/222 (70%), Positives = 180/222 (81%), Gaps = 8/222 (3%)
 Frame = +1

Query: 253 MARLKIQIKKIDNTTARQVTFSKRRRGLFKKAAELSILCDADVAVIVFSATGKLFEYSNL 432
           MAR KIQIKKIDN TARQVTFSKRRRGL KKA ELS+LCDAD+A+I+FS+TGKLFEY++ 
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLLKKAEELSVLCDADIALIIFSSTGKLFEYASS 60

Query: 433 NMKEILERHNLQSKNLQEMEQLSLDLQL-ENCNYARLSKEVAERSRQLRVMRGEELQGLN 609
           +MKEILERHNL SKNL+++EQ SL LQL EN NY RLSKE+A +S QLR MRGEE+QGLN
Sbjct: 61  SMKEILERHNLHSKNLEKLEQPSLQLQLVENSNYTRLSKEIAAKSHQLRQMRGEEIQGLN 120

Query: 610 IEELQQLEKSLETGFNRVLETKGERIVSEINTLQAKGMQLMEENERLRLQMVG------- 768
           +EELQQLEKSLETG  RV+E K E+I+ EI  LQ  GMQLMEENERLR Q+         
Sbjct: 121 LEELQQLEKSLETGLGRVIEKKSEKIMKEIGDLQRNGMQLMEENERLRQQVAEKSDGRRL 180

Query: 769 VSIDTDNTVHEEGQSSESVTNIISSGGSPQDYDSSDTSLKLG 894
           V +D++N   EEGQSSESVTN  +S   PQDYDSSDTSLKLG
Sbjct: 181 VQVDSENMFTEEGQSSESVTNPCNSNNGPQDYDSSDTSLKLG 222


Top