BLASTX nr result

ID: Cimicifuga21_contig00004288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004288
         (908 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    38   9e-06

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 38.1 bits (87), Expect(3) = 9e-06
 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
 Frame = -3

Query: 369 KRFSITCEDHDKSPANAWINAALQHKVQELVCN----SESEDFASSLYCLFSRALRPTTL 202
           ++F+++C   D +    W++AA+   V+EL  N     ESE F S L CLF+ A    TL
Sbjct: 111 EKFTLSCGIDDATRTRTWVSAAVNRNVKELCVNFYEGGESESFVSPL-CLFTCA----TL 165

Query: 201 FKLPI 187
            KL I
Sbjct: 166 TKLKI 170



 Score = 30.0 bits (66), Expect(3) = 9e-06
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = -1

Query: 503 NILSTRWKYMWTSVHILEFDEGGIVDKDPVYKDEIPKIL 387
           +ILS +W+++W S+  LEF +     K  ++ + + ++L
Sbjct: 64  SILSRKWEHLWKSLSNLEFHQCYFKAKRKIFMNSVERVL 102



 Score = 26.9 bits (58), Expect(3) = 9e-06
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -2

Query: 565 LPGSLVHDILSFLLTKDAV 509
           LP +L+  ILSFL TKDAV
Sbjct: 43  LPDALLQHILSFLETKDAV 61


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