BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004266
         (2587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   444   e-122
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              444   e-122
ref|XP_002316405.1| predicted protein [Populus trichocarpa] gi|2...   425   e-116
ref|XP_002532622.1| Far upstream element-binding protein, putati...   424   e-116
gb|ABQ23585.1| putative KH-domain containing protein [Medicago t...   415   e-113

>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  444 bits (1142), Expect = e-122
 Identities = 238/331 (71%), Positives = 265/331 (80%)
 Frame = -1

Query: 1270 MESPGSNYASSPETAPKRSAPSRTPPPLEDKEKPAHIRFLVSNAAAGSVIGKGGSTINDF 1091
            MESP S Y SSPE  PKRS+P R+P   +  EK  +IRFLVSNAAAGSVIGKGGSTINDF
Sbjct: 1    MESPESAYVSSPEVPPKRSSPPRSPTS-DFMEKSTYIRFLVSNAAAGSVIGKGGSTINDF 59

Query: 1090 QSQSGARIQLSRNNEFFPGTSDRIIMISGAYDDILKAMELILSKLLNEVHAEDGDDIDPR 911
            QSQSGARIQLSRN+EFFPGTSDRIIMISGA ++I+KAMELIL+KLL+E+H EDGD+ DPR
Sbjct: 60   QSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPR 119

Query: 910  SKVRLIVPNSSCXXXXXXXGATIKSFIEESQAGIKISPQDQNYIGLSDRLVTITGALEEQ 731
            SKVRLIVPNSSC       G+TIKSFIE+SQA IKISPQD NY+GL+DRLVT+ G+LEEQ
Sbjct: 120  SKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQ 179

Query: 730  MHAISLILSKLMEDNHYLQSMTAPFTYAGVNFSXXXXXXXXXXXXXXXXXXYNAVSYGPN 551
            M AI LILSKL ED HY Q M APF+YA                       YN+++YGPN
Sbjct: 180  MRAIDLILSKLTEDPHYTQFMNAPFSYAAA---------------------YNSMNYGPN 218

Query: 550  GGGGKFQNYKEDRSNSKTIGVADEHIGIVLGRGGRNIMEISQVSGARIKISDRGDFMSGT 371
            G GGKFQN KEDRSNS TIGVADEHIG+V+GRGGRNIM+ISQ SGARIKISDRGDFMSGT
Sbjct: 219  GAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGT 278

Query: 370  SDRKVTITGSQAAVRAAELMIKDKVTSNSER 278
            +DRKVTITGSQ A+RAAE MI  KV S SER
Sbjct: 279  TDRKVTITGSQRAIRAAESMIMQKVASASER 309


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  444 bits (1142), Expect = e-122
 Identities = 238/331 (71%), Positives = 265/331 (80%)
 Frame = -1

Query: 1270 MESPGSNYASSPETAPKRSAPSRTPPPLEDKEKPAHIRFLVSNAAAGSVIGKGGSTINDF 1091
            MESP S Y SSPE  PKRS+P R+P   +  EK  +IRFLVSNAAAGSVIGKGGSTINDF
Sbjct: 49   MESPESAYVSSPEVPPKRSSPPRSPTS-DFMEKSTYIRFLVSNAAAGSVIGKGGSTINDF 107

Query: 1090 QSQSGARIQLSRNNEFFPGTSDRIIMISGAYDDILKAMELILSKLLNEVHAEDGDDIDPR 911
            QSQSGARIQLSRN+EFFPGTSDRIIMISGA ++I+KAMELIL+KLL+E+H EDGD+ DPR
Sbjct: 108  QSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPR 167

Query: 910  SKVRLIVPNSSCXXXXXXXGATIKSFIEESQAGIKISPQDQNYIGLSDRLVTITGALEEQ 731
            SKVRLIVPNSSC       G+TIKSFIE+SQA IKISPQD NY+GL+DRLVT+ G+LEEQ
Sbjct: 168  SKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQ 227

Query: 730  MHAISLILSKLMEDNHYLQSMTAPFTYAGVNFSXXXXXXXXXXXXXXXXXXYNAVSYGPN 551
            M AI LILSKL ED HY Q M APF+YA                       YN+++YGPN
Sbjct: 228  MRAIDLILSKLTEDPHYTQFMNAPFSYAAA---------------------YNSMNYGPN 266

Query: 550  GGGGKFQNYKEDRSNSKTIGVADEHIGIVLGRGGRNIMEISQVSGARIKISDRGDFMSGT 371
            G GGKFQN KEDRSNS TIGVADEHIG+V+GRGGRNIM+ISQ SGARIKISDRGDFMSGT
Sbjct: 267  GAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGT 326

Query: 370  SDRKVTITGSQAAVRAAELMIKDKVTSNSER 278
            +DRKVTITGSQ A+RAAE MI  KV S SER
Sbjct: 327  TDRKVTITGSQRAIRAAESMIMQKVASASER 357


>ref|XP_002316405.1| predicted protein [Populus trichocarpa] gi|222865445|gb|EEF02576.1|
            predicted protein [Populus trichocarpa]
          Length = 334

 Score =  425 bits (1093), Expect = e-116
 Identities = 221/333 (66%), Positives = 260/333 (78%)
 Frame = -1

Query: 1270 MESPGSNYASSPETAPKRSAPSRTPPPLEDKEKPAHIRFLVSNAAAGSVIGKGGSTINDF 1091
            MES  S+Y SSPE   KRS P    PP + +EKP + RFLVSNAAAGSVIGKGG+TI DF
Sbjct: 1    MESTESSYVSSPEQPQKRSPPPPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITDF 60

Query: 1090 QSQSGARIQLSRNNEFFPGTSDRIIMISGAYDDILKAMELILSKLLNEVHAEDGDDIDPR 911
            QSQSGARIQLSRN EFFPGTSDRIIM+SG  DD+LKA+ELI++KLL+E+ AEDGD+ +PR
Sbjct: 61   QSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEPR 120

Query: 910  SKVRLIVPNSSCXXXXXXXGATIKSFIEESQAGIKISPQDQNYIGLSDRLVTITGALEEQ 731
             +VRL+VPNS+C       G+ IKSFIEES AGIKISP D  + GL+DRLVT+TG LEEQ
Sbjct: 121  MRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTLEEQ 180

Query: 730  MHAISLILSKLMEDNHYLQSMTAPFTYAGVNFSXXXXXXXXXXXXXXXXXXYNAVSYGPN 551
            MHAI LILSKL +D HY Q+M APF+YAGV FS                  YN++++GPN
Sbjct: 181  MHAIDLILSKLTDDPHYSQTMHAPFSYAGVFFSGFDGIQYACVLPYVATAAYNSMNHGPN 240

Query: 550  GGGGKFQNYKEDRSNSKTIGVADEHIGIVLGRGGRNIMEISQVSGARIKISDRGDFMSGT 371
            G   KFQ+ K+D +NS TIGVADEHIG+V+GRGGRNIMEISQ SGAR+KISDRGDFMSGT
Sbjct: 241  GAAVKFQHNKDDITNSVTIGVADEHIGLVVGRGGRNIMEISQTSGARLKISDRGDFMSGT 300

Query: 370  SDRKVTITGSQAAVRAAELMIKDKVTSNSERDT 272
            +DRK+TITGSQ A+RAAE MI  KV+  SER+T
Sbjct: 301  TDRKITITGSQRAIRAAEDMIMQKVSYASERET 333


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
            gi|223527642|gb|EEF29753.1| Far upstream element-binding
            protein, putative [Ricinus communis]
          Length = 314

 Score =  424 bits (1090), Expect = e-116
 Identities = 225/332 (67%), Positives = 257/332 (77%), Gaps = 1/332 (0%)
 Frame = -1

Query: 1270 MESPGSNYASSPETAP-KRSAPSRTPPPLEDKEKPAHIRFLVSNAAAGSVIGKGGSTIND 1094
            MES  S+Y SSPE  P KRS P    P  +  EKP ++RFLVSNAAAGSVIGKGG+TI D
Sbjct: 1    MESTESSYVSSPEAPPRKRSPPPPKSPTSDSVEKPTYVRFLVSNAAAGSVIGKGGATITD 60

Query: 1093 FQSQSGARIQLSRNNEFFPGTSDRIIMISGAYDDILKAMELILSKLLNEVHAEDGDDIDP 914
            FQSQSGARIQLSRN EFFPGTSDRII+ISG  DD+LK +EL+L+KLL+E+H EDGDD+DP
Sbjct: 61   FQSQSGARIQLSRNYEFFPGTSDRIILISGILDDVLKGVELVLAKLLSELHTEDGDDVDP 120

Query: 913  RSKVRLIVPNSSCXXXXXXXGATIKSFIEESQAGIKISPQDQNYIGLSDRLVTITGALEE 734
            R+KVRL+VPNSSC       G+ IKSFIEESQAGIKISPQD N+ GL+DRLVT+TG LEE
Sbjct: 121  RTKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEE 180

Query: 733  QMHAISLILSKLMEDNHYLQSMTAPFTYAGVNFSXXXXXXXXXXXXXXXXXXYNAVSYGP 554
            QM AI LILSKL +D HY+Q+M APF+YA                       YN+++YG 
Sbjct: 181  QMRAIDLILSKLYDDPHYVQTMHAPFSYA---------------------VAYNSMNYGA 219

Query: 553  NGGGGKFQNYKEDRSNSKTIGVADEHIGIVLGRGGRNIMEISQVSGARIKISDRGDFMSG 374
            NG GGKFQN KEDR+NS TIGVAD HIG+V+GRGGRNIMEISQVSGARIKISDRGDFMSG
Sbjct: 220  NGAGGKFQNNKEDRTNSVTIGVADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSG 279

Query: 373  TSDRKVTITGSQAAVRAAELMIKDKVTSNSER 278
            T+DRK+ ITGSQ A+R AE MI  KV   SER
Sbjct: 280  TNDRKIIITGSQRAIRTAEGMIMQKVAYASER 311


>gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
          Length = 334

 Score =  415 bits (1067), Expect = e-113
 Identities = 217/333 (65%), Positives = 259/333 (77%), Gaps = 2/333 (0%)
 Frame = -1

Query: 1270 MESPGSNYASSPETAPKRSAPSRTP--PPLEDKEKPAHIRFLVSNAAAGSVIGKGGSTIN 1097
            MESP S+Y SSPE  P++ A S  P  P  +  EKP ++RFLVSN+AAGSVIGKGGSTI 
Sbjct: 1    MESPESSYVSSPE-GPRKHASSPPPDSPSQDSVEKPTYVRFLVSNSAAGSVIGKGGSTIT 59

Query: 1096 DFQSQSGARIQLSRNNEFFPGTSDRIIMISGAYDDILKAMELILSKLLNEVHAEDGDDID 917
            DFQSQSGARIQLSRNNEFFPGT+DRIIM+SGA +++L+A+ELILSKLL+E+H+ED +D++
Sbjct: 60   DFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLRAVELILSKLLSELHSEDDNDVE 119

Query: 916  PRSKVRLIVPNSSCXXXXXXXGATIKSFIEESQAGIKISPQDQNYIGLSDRLVTITGALE 737
            P++KVRLIVPN SC       GATI+SFIEESQAGIKISPQD +Y G +DR+VT+TG L+
Sbjct: 120  PKTKVRLIVPNGSCGGIIGKGGATIRSFIEESQAGIKISPQDNSYYGQNDRIVTVTGTLD 179

Query: 736  EQMHAISLILSKLMEDNHYLQSMTAPFTYAGVNFSXXXXXXXXXXXXXXXXXXYNAVSYG 557
            EQM  I LI+SKL ED HY  SM++PFTY+G   S                  YN V+Y 
Sbjct: 180  EQMRGIDLIVSKLAEDPHYSHSMSSPFTYSGAYVSGYQGVPYTYVLPSVAPPAYNGVNYR 239

Query: 556  PNGGGGKFQNYKEDRSNSKTIGVADEHIGIVLGRGGRNIMEISQVSGARIKISDRGDFMS 377
            PNG G KFQN KEDRSNS TIGVADEHIG+V+GRGGRNI +ISQ SGA+IKISDRGD++S
Sbjct: 240  PNGTGAKFQNSKEDRSNSMTIGVADEHIGLVVGRGGRNISDISQTSGAKIKISDRGDYIS 299

Query: 376  GTSDRKVTITGSQAAVRAAELMIKDKVTSNSER 278
            GT+DRKVTITGSQ A+R AE MI  KV   +ER
Sbjct: 300  GTTDRKVTITGSQRAIRTAESMILQKVAYATER 332