BLASTX nr result

ID: Cimicifuga21_contig00004262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004262
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266842.2| PREDICTED: ABC transporter C family member 1...   322   2e-86
emb|CBI22568.3| unnamed protein product [Vitis vinifera]              322   2e-86
ref|XP_003592151.1| Multidrug resistance protein ABC transporter...   320   9e-86
ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...   319   2e-85
emb|CBI22551.3| unnamed protein product [Vitis vinifera]              319   2e-85

>ref|XP_002266842.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1483

 Score =  322 bits (825), Expect = 2e-86
 Identities = 156/181 (86%), Positives = 165/181 (91%)
 Frame = -3

Query: 545  IPSEAPVVIDKNRPTPNWPTFGRVEIQDLKIRYRPDTPFVLRGITCTFEGGHKIGIVGRT 366
            IPSEAP VI  NRP PNWP  G+VEIQ L+IRYRP+ P VLRGI C FEGGHKIGIVGRT
Sbjct: 1214 IPSEAPEVIHNNRPPPNWPDVGKVEIQKLQIRYRPNLPLVLRGIDCIFEGGHKIGIVGRT 1273

Query: 365  GSGKTTLISALFRLVEPAGGKIIIDGLDISTIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 186
            GSGKTTLISALFRLVEPAGG+II+DGLDIS IGLHDLRSRFGIIPQDPTLFNGTVRYNLD
Sbjct: 1274 GSGKTTLISALFRLVEPAGGRIIVDGLDISMIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 1333

Query: 185  PLSQHTDLEIWEVLKKCQLQEAVEDKEEGLDASVVEDGTNWSMGQRQLFCLGRALLRRSR 6
            PLSQHT+ EIWEVL KCQLQE V+DKEEGLD+ VVEDG+NWSMGQRQLFCLGRALLRRSR
Sbjct: 1334 PLSQHTEQEIWEVLAKCQLQETVQDKEEGLDSMVVEDGSNWSMGQRQLFCLGRALLRRSR 1393

Query: 5    I 3
            I
Sbjct: 1394 I 1394


>emb|CBI22568.3| unnamed protein product [Vitis vinifera]
          Length = 1160

 Score =  322 bits (825), Expect = 2e-86
 Identities = 156/181 (86%), Positives = 165/181 (91%)
 Frame = -3

Query: 545  IPSEAPVVIDKNRPTPNWPTFGRVEIQDLKIRYRPDTPFVLRGITCTFEGGHKIGIVGRT 366
            IPSEAP VI  NRP PNWP  G+VEIQ L+IRYRP+ P VLRGI C FEGGHKIGIVGRT
Sbjct: 852  IPSEAPEVIHNNRPPPNWPDVGKVEIQKLQIRYRPNLPLVLRGIDCIFEGGHKIGIVGRT 911

Query: 365  GSGKTTLISALFRLVEPAGGKIIIDGLDISTIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 186
            GSGKTTLISALFRLVEPAGG+II+DGLDIS IGLHDLRSRFGIIPQDPTLFNGTVRYNLD
Sbjct: 912  GSGKTTLISALFRLVEPAGGRIIVDGLDISMIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 971

Query: 185  PLSQHTDLEIWEVLKKCQLQEAVEDKEEGLDASVVEDGTNWSMGQRQLFCLGRALLRRSR 6
            PLSQHT+ EIWEVL KCQLQE V+DKEEGLD+ VVEDG+NWSMGQRQLFCLGRALLRRSR
Sbjct: 972  PLSQHTEQEIWEVLAKCQLQETVQDKEEGLDSMVVEDGSNWSMGQRQLFCLGRALLRRSR 1031

Query: 5    I 3
            I
Sbjct: 1032 I 1032


>ref|XP_003592151.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355481199|gb|AES62402.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1516

 Score =  320 bits (820), Expect = 9e-86
 Identities = 153/181 (84%), Positives = 166/181 (91%)
 Frame = -3

Query: 545  IPSEAPVVIDKNRPTPNWPTFGRVEIQDLKIRYRPDTPFVLRGITCTFEGGHKIGIVGRT 366
            +PSEAP  I+ NRP  NWP  GRVEI++L+IRYRPD P VLRGITCTFEGGHKIGIVGRT
Sbjct: 1247 VPSEAPERIEGNRPPVNWPVVGRVEIKELQIRYRPDAPLVLRGITCTFEGGHKIGIVGRT 1306

Query: 365  GSGKTTLISALFRLVEPAGGKIIIDGLDISTIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 186
            GSGKTTLI ALFRLVEPAGGKII+DG+DI +IGLHDLRSRFGIIPQDPTLFNGTVRYNLD
Sbjct: 1307 GSGKTTLIGALFRLVEPAGGKIIVDGIDIGSIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 1366

Query: 185  PLSQHTDLEIWEVLKKCQLQEAVEDKEEGLDASVVEDGTNWSMGQRQLFCLGRALLRRSR 6
            PLSQH+D EIWEVL KCQLQEAV++KE GLD+SVVEDG NWSMGQRQLFCLGRALLRRSR
Sbjct: 1367 PLSQHSDQEIWEVLGKCQLQEAVQEKEGGLDSSVVEDGANWSMGQRQLFCLGRALLRRSR 1426

Query: 5    I 3
            +
Sbjct: 1427 V 1427



 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 43/141 (30%), Positives = 63/141 (44%)
 Frame = -3

Query: 425  LRGITCTFEGGHKIGIVGRTGSGKTTLISALFRLVEPAGGKIIIDGLDISTIGLHDLRSR 246
            LR I    + G K+ I G  GSGK++L+SA+   V    GKI             D+  +
Sbjct: 637  LRNINLEVKSGQKVAICGEVGSGKSSLLSAILGEVPNTRGKI-------------DVYGK 683

Query: 245  FGIIPQDPTLFNGTVRYNLDPLSQHTDLEIWEVLKKCQLQEAVEDKEEGLDASVVEDGTN 66
            F  + Q   +  GT+R N+   S     +  E L +  L + +E    G    + E G N
Sbjct: 684  FAYVSQTAWIQTGTIRDNVLFGSPMDAQKYQETLHRSSLVKDLELLPHGDLTEIGERGVN 743

Query: 65   WSMGQRQLFCLGRALLRRSRI 3
             S GQ+Q   L RAL + + I
Sbjct: 744  LSGGQKQRIQLARALYQNADI 764


>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score =  319 bits (818), Expect = 2e-85
 Identities = 154/181 (85%), Positives = 164/181 (90%)
 Frame = -3

Query: 545  IPSEAPVVIDKNRPTPNWPTFGRVEIQDLKIRYRPDTPFVLRGITCTFEGGHKIGIVGRT 366
            IPSEAP VI+ +RP PNWP  GRV+I DL+IRYRPDTP VLRGI CTFEGGHKIGIVGRT
Sbjct: 1263 IPSEAPEVIEGSRPPPNWPAVGRVDIHDLQIRYRPDTPLVLRGINCTFEGGHKIGIVGRT 1322

Query: 365  GSGKTTLISALFRLVEPAGGKIIIDGLDISTIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 186
            GSGKTTLI ALFRLVEPAGGKII+DG+DISTIGLHDLRS FGIIPQDPTLFNG VRYNLD
Sbjct: 1323 GSGKTTLIGALFRLVEPAGGKIIVDGIDISTIGLHDLRSHFGIIPQDPTLFNGAVRYNLD 1382

Query: 185  PLSQHTDLEIWEVLKKCQLQEAVEDKEEGLDASVVEDGTNWSMGQRQLFCLGRALLRRSR 6
            PLSQHTD EIWEVL KCQLQEAV++KEEGL + V E G+NWSMGQRQLFCLGRALLRRSR
Sbjct: 1383 PLSQHTDHEIWEVLGKCQLQEAVQEKEEGLGSIVAEGGSNWSMGQRQLFCLGRALLRRSR 1442

Query: 5    I 3
            I
Sbjct: 1443 I 1443


>emb|CBI22551.3| unnamed protein product [Vitis vinifera]
          Length = 1395

 Score =  319 bits (818), Expect = 2e-85
 Identities = 154/181 (85%), Positives = 164/181 (90%)
 Frame = -3

Query: 545  IPSEAPVVIDKNRPTPNWPTFGRVEIQDLKIRYRPDTPFVLRGITCTFEGGHKIGIVGRT 366
            IPSEAP VI+ +RP PNWP  GRV+I DL+IRYRPDTP VLRGI CTFEGGHKIGIVGRT
Sbjct: 1126 IPSEAPEVIEGSRPPPNWPAVGRVDIHDLQIRYRPDTPLVLRGINCTFEGGHKIGIVGRT 1185

Query: 365  GSGKTTLISALFRLVEPAGGKIIIDGLDISTIGLHDLRSRFGIIPQDPTLFNGTVRYNLD 186
            GSGKTTLI ALFRLVEPAGGKII+DG+DISTIGLHDLRS FGIIPQDPTLFNG VRYNLD
Sbjct: 1186 GSGKTTLIGALFRLVEPAGGKIIVDGIDISTIGLHDLRSHFGIIPQDPTLFNGAVRYNLD 1245

Query: 185  PLSQHTDLEIWEVLKKCQLQEAVEDKEEGLDASVVEDGTNWSMGQRQLFCLGRALLRRSR 6
            PLSQHTD EIWEVL KCQLQEAV++KEEGL + V E G+NWSMGQRQLFCLGRALLRRSR
Sbjct: 1246 PLSQHTDHEIWEVLGKCQLQEAVQEKEEGLGSIVAEGGSNWSMGQRQLFCLGRALLRRSR 1305

Query: 5    I 3
            I
Sbjct: 1306 I 1306


Top