BLASTX nr result

ID: Cimicifuga21_contig00004254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004254
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320575.1| predicted protein [Populus trichocarpa] gi|2...   199   3e-49
ref|XP_002533677.1| Replication factor C subunit, putative [Rici...   192   5e-47
ref|XP_002265263.2| PREDICTED: uncharacterized protein LOC100265...   187   9e-46
emb|CBI38070.3| unnamed protein product [Vitis vinifera]              187   9e-46
tpg|DAA46417.1| TPA: hypothetical protein ZEAMMB73_190155 [Zea m...   174   8e-42

>ref|XP_002320575.1| predicted protein [Populus trichocarpa] gi|222861348|gb|EEE98890.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score =  199 bits (506), Expect = 3e-49
 Identities = 96/137 (70%), Positives = 117/137 (85%)
 Frame = +3

Query: 3   IILHEADKLSTDAQLYIRWLMERNKGCNKIFFCCHDASKLQTIKSLLKVVQLLPPSNNEI 182
           IIL+EAD LSTDA LYI+W++ER KG +K FFCC+D S+LQ I+SL  VVQLLPPS  E+
Sbjct: 455 IILYEADMLSTDALLYIKWVLERYKGFSKFFFCCNDVSRLQPIRSLCTVVQLLPPSKREV 514

Query: 183 VEVLEFIAEQEGIQLPHQLAERIAENSQNNLRQAIRSFEASWQLNSPLKEDQVIMTGWEE 362
           V+VLEFIAEQE I+LP+ LAE+IA+ S+NNLRQAIRSFEASW  + P  EDQ I+TGWE+
Sbjct: 515 VQVLEFIAEQEAIELPYPLAEKIADKSKNNLRQAIRSFEASWHGSYPFTEDQEILTGWED 574

Query: 363 DIANIAKNIIEEQSPKQ 413
           DIANIAK+++EEQSPKQ
Sbjct: 575 DIANIAKDMVEEQSPKQ 591


>ref|XP_002533677.1| Replication factor C subunit, putative [Ricinus communis]
           gi|223526428|gb|EEF28707.1| Replication factor C
           subunit, putative [Ricinus communis]
          Length = 661

 Score =  192 bits (487), Expect = 5e-47
 Identities = 94/137 (68%), Positives = 113/137 (82%)
 Frame = +3

Query: 3   IILHEADKLSTDAQLYIRWLMERNKGCNKIFFCCHDASKLQTIKSLLKVVQLLPPSNNEI 182
           IIL+ AD+LS DA LYI+WL+ER +G +K FFCC D SKLQ IK L  +VQL  PSN+EI
Sbjct: 429 IILYNADRLSADAVLYIKWLLERYQGSSKFFFCCSDVSKLQAIKELCNLVQLFMPSNDEI 488

Query: 183 VEVLEFIAEQEGIQLPHQLAERIAENSQNNLRQAIRSFEASWQLNSPLKEDQVIMTGWEE 362
           V+VL+FIA+QEGI+LP Q AERIA  S+NNLRQAIRS EASW+ + P  EDQ I+TGWE+
Sbjct: 489 VKVLKFIAKQEGIELPFQFAERIALESKNNLRQAIRSLEASWRRSYPFAEDQEILTGWED 548

Query: 363 DIANIAKNIIEEQSPKQ 413
           DIANIAKN+I+EQSPKQ
Sbjct: 549 DIANIAKNMIQEQSPKQ 565


>ref|XP_002265263.2| PREDICTED: uncharacterized protein LOC100265748 [Vitis vinifera]
          Length = 659

 Score =  187 bits (476), Expect = 9e-46
 Identities = 91/137 (66%), Positives = 112/137 (81%)
 Frame = +3

Query: 3   IILHEADKLSTDAQLYIRWLMERNKGCNKIFFCCHDASKLQTIKSLLKVVQLLPPSNNEI 182
           I+L+EA+KLST+A LY +WL+++ +G N +FF C D SKLQ IKSL  +VQLLPPS+ EI
Sbjct: 425 IVLYEAEKLSTEALLYFKWLLDKYEGHNMVFFSCSDTSKLQPIKSLCTMVQLLPPSDEEI 484

Query: 183 VEVLEFIAEQEGIQLPHQLAERIAENSQNNLRQAIRSFEASWQLNSPLKEDQVIMTGWEE 362
           VEVLE IA+QE I LP +LAE+I  NS+NNLRQAIRSFEA+W+   P +EDQ I TGWE+
Sbjct: 485 VEVLELIAKQESINLPRELAEKIVGNSKNNLRQAIRSFEATWKFKYPFEEDQEIRTGWED 544

Query: 363 DIANIAKNIIEEQSPKQ 413
           DIA IAKNIIEEQ+PKQ
Sbjct: 545 DIARIAKNIIEEQTPKQ 561


>emb|CBI38070.3| unnamed protein product [Vitis vinifera]
          Length = 530

 Score =  187 bits (476), Expect = 9e-46
 Identities = 91/137 (66%), Positives = 112/137 (81%)
 Frame = +3

Query: 3   IILHEADKLSTDAQLYIRWLMERNKGCNKIFFCCHDASKLQTIKSLLKVVQLLPPSNNEI 182
           I+L+EA+KLST+A LY +WL+++ +G N +FF C D SKLQ IKSL  +VQLLPPS+ EI
Sbjct: 339 IVLYEAEKLSTEALLYFKWLLDKYEGHNMVFFSCSDTSKLQPIKSLCTMVQLLPPSDEEI 398

Query: 183 VEVLEFIAEQEGIQLPHQLAERIAENSQNNLRQAIRSFEASWQLNSPLKEDQVIMTGWEE 362
           VEVLE IA+QE I LP +LAE+I  NS+NNLRQAIRSFEA+W+   P +EDQ I TGWE+
Sbjct: 399 VEVLELIAKQESINLPRELAEKIVGNSKNNLRQAIRSFEATWKFKYPFEEDQEIRTGWED 458

Query: 363 DIANIAKNIIEEQSPKQ 413
           DIA IAKNIIEEQ+PKQ
Sbjct: 459 DIARIAKNIIEEQTPKQ 475


>tpg|DAA46417.1| TPA: hypothetical protein ZEAMMB73_190155 [Zea mays]
          Length = 638

 Score =  174 bits (442), Expect = 8e-42
 Identities = 84/137 (61%), Positives = 101/137 (73%)
 Frame = +3

Query: 3   IILHEADKLSTDAQLYIRWLMERNKGCNKIFFCCHDASKLQTIKSLLKVVQLLPPSNNEI 182
           I++H+ADKLS D Q YI W + R  GCNKI FCC DAS L+ IK L KVV L PPS +EI
Sbjct: 382 IVIHDADKLSFDLQHYIGWFLGRYAGCNKIIFCCSDASNLEAIKHLCKVVTLQPPSFDEI 441

Query: 183 VEVLEFIAEQEGIQLPHQLAERIAENSQNNLRQAIRSFEASWQLNSPLKEDQVIMTGWEE 362
           + VLE+IA QE I LP  LA RI   + NNLRQ IRSFEA+W+ N P  + QVI+TGWEE
Sbjct: 442 INVLEYIATQESIDLPRDLARRITVGANNNLRQTIRSFEATWKANYPFIDGQVILTGWEE 501

Query: 363 DIANIAKNIIEEQSPKQ 413
           +I+N+A NI+EE SPKQ
Sbjct: 502 EISNVASNIMEEPSPKQ 518


Top