BLASTX nr result

ID: Cimicifuga21_contig00004252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004252
         (1961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262...   162   2e-37
ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216...   160   9e-37
ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [M...   159   3e-36
ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [M...   159   3e-36
ref|XP_002516840.1| serine/arginine rich splicing factor, putati...   159   3e-36

>ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
           gi|298205010|emb|CBI34317.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  162 bits (411), Expect = 2e-37
 Identities = 77/88 (87%), Positives = 83/88 (94%)
 Frame = +2

Query: 242 PSGLLVRNIALDARPEDLRVPFERYGPVKDVYLPRNYYTGEPRGFGFVKFHSAEDAAEAK 421
           PSGLLVRNIALDARPEDLRVPFER+GPVKDVYLP+NYYTGEPRGFGFVKF +AEDAAEAK
Sbjct: 43  PSGLLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAK 102

Query: 422 ENMNRQLIGGREIRIVFAEENRKTPQEM 505
            ++N  +IGGREI IVFAEENRKTPQEM
Sbjct: 103 HHLNHSVIGGREIAIVFAEENRKTPQEM 130


>ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
           gi|449495419|ref|XP_004159835.1| PREDICTED:
           uncharacterized LOC101216537 [Cucumis sativus]
          Length = 248

 Score =  160 bits (406), Expect = 9e-37
 Identities = 75/88 (85%), Positives = 82/88 (93%)
 Frame = +2

Query: 242 PSGLLVRNIALDARPEDLRVPFERYGPVKDVYLPRNYYTGEPRGFGFVKFHSAEDAAEAK 421
           PSGLLVRN+ LDARPEDLR+PFER+GPVKDVYLP+NYYTGEPRGFGFVKF  AEDAAEAK
Sbjct: 49  PSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAK 108

Query: 422 ENMNRQLIGGREIRIVFAEENRKTPQEM 505
           + +N  +IGGREIRIVFAEENRKTPQEM
Sbjct: 109 QQLNHTVIGGREIRIVFAEENRKTPQEM 136


>ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
           gi|355510621|gb|AES91763.1| Splicing factor,
           arginine/serine-rich 13A [Medicago truncatula]
          Length = 192

 Score =  159 bits (402), Expect = 3e-36
 Identities = 75/88 (85%), Positives = 80/88 (90%)
 Frame = +2

Query: 242 PSGLLVRNIALDARPEDLRVPFERYGPVKDVYLPRNYYTGEPRGFGFVKFHSAEDAAEAK 421
           PSGLLVRN+ LDARPEDLR PFERYGPVKDVYLPRNYYTGEPRGFGFVK+   EDAAEAK
Sbjct: 47  PSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAK 106

Query: 422 ENMNRQLIGGREIRIVFAEENRKTPQEM 505
           + +N  +IGGREIRIVFAEENRKTPQEM
Sbjct: 107 QQLNHTIIGGREIRIVFAEENRKTPQEM 134


>ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
           gi|355510620|gb|AES91762.1| Splicing factor,
           arginine/serine-rich 13A [Medicago truncatula]
          Length = 314

 Score =  159 bits (402), Expect = 3e-36
 Identities = 75/88 (85%), Positives = 80/88 (90%)
 Frame = +2

Query: 242 PSGLLVRNIALDARPEDLRVPFERYGPVKDVYLPRNYYTGEPRGFGFVKFHSAEDAAEAK 421
           PSGLLVRN+ LDARPEDLR PFERYGPVKDVYLPRNYYTGEPRGFGFVK+   EDAAEAK
Sbjct: 47  PSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAK 106

Query: 422 ENMNRQLIGGREIRIVFAEENRKTPQEM 505
           + +N  +IGGREIRIVFAEENRKTPQEM
Sbjct: 107 QQLNHTIIGGREIRIVFAEENRKTPQEM 134


>ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223543928|gb|EEF45454.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 257

 Score =  159 bits (401), Expect = 3e-36
 Identities = 74/88 (84%), Positives = 82/88 (93%)
 Frame = +2

Query: 242 PSGLLVRNIALDARPEDLRVPFERYGPVKDVYLPRNYYTGEPRGFGFVKFHSAEDAAEAK 421
           PSGLLVRN+ LDARPEDLR PFE+YGPVKDVYLP+NYYTGEPRGFGFVK+  AEDAAEAK
Sbjct: 51  PSGLLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAK 110

Query: 422 ENMNRQLIGGREIRIVFAEENRKTPQEM 505
           + MN ++IGGREIRIV+AEENRKTPQEM
Sbjct: 111 QRMNHKIIGGREIRIVYAEENRKTPQEM 138


Top