BLASTX nr result

ID: Cimicifuga21_contig00004251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004251
         (1139 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25376.3| unnamed protein product [Vitis vinifera]              136   9e-30
ref|XP_004158964.1| PREDICTED: 40S ribosomal protein S26-1-like ...   136   1e-29
ref|XP_004146441.1| PREDICTED: 40S ribosomal protein S26-1-like ...   136   1e-29
ref|XP_004138397.1| PREDICTED: 40S ribosomal protein S26-1-like ...   136   1e-29
ref|XP_002279872.1| PREDICTED: 40S ribosomal protein S26-2-like ...   136   1e-29

>emb|CBI25376.3| unnamed protein product [Vitis vinifera]
          Length = 150

 Score =  136 bits (343), Expect = 9e-30
 Identities = 70/94 (74%), Positives = 71/94 (75%)
 Frame = +1

Query: 67  RTESLGLGQEQKMTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQA 246
           RT SL +     MTF              VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQA
Sbjct: 20  RTRSLTV-----MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQA 74

Query: 247 AVRDVQEACVNDGYTLPKLYAKMQYCVSCAIHSH 348
           AVRDVQEACV D YTLPKLYAKMQYCVSCAIHSH
Sbjct: 75  AVRDVQEACVYDTYTLPKLYAKMQYCVSCAIHSH 108


>ref|XP_004158964.1| PREDICTED: 40S ribosomal protein S26-1-like [Cucumis sativus]
          Length = 129

 Score =  136 bits (342), Expect = 1e-29
 Identities = 66/82 (80%), Positives = 66/82 (80%)
 Frame = +1

Query: 103 MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVND 282
           MTF              VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV D
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 283 GYTLPKLYAKMQYCVSCAIHSH 348
            YTLPKLYAKMQYCVSCAIHSH
Sbjct: 61  QYTLPKLYAKMQYCVSCAIHSH 82


>ref|XP_004146441.1| PREDICTED: 40S ribosomal protein S26-1-like [Cucumis sativus]
          Length = 129

 Score =  136 bits (342), Expect = 1e-29
 Identities = 66/82 (80%), Positives = 66/82 (80%)
 Frame = +1

Query: 103 MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVND 282
           MTF              VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV D
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 283 GYTLPKLYAKMQYCVSCAIHSH 348
            YTLPKLYAKMQYCVSCAIHSH
Sbjct: 61  QYTLPKLYAKMQYCVSCAIHSH 82


>ref|XP_004138397.1| PREDICTED: 40S ribosomal protein S26-1-like [Cucumis sativus]
           gi|449514728|ref|XP_004164463.1| PREDICTED: 40S
           ribosomal protein S26-1-like [Cucumis sativus]
          Length = 129

 Score =  136 bits (342), Expect = 1e-29
 Identities = 66/82 (80%), Positives = 66/82 (80%)
 Frame = +1

Query: 103 MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVND 282
           MTF              VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV D
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 283 GYTLPKLYAKMQYCVSCAIHSH 348
            YTLPKLYAKMQYCVSCAIHSH
Sbjct: 61  QYTLPKLYAKMQYCVSCAIHSH 82


>ref|XP_002279872.1| PREDICTED: 40S ribosomal protein S26-2-like [Vitis vinifera]
          Length = 124

 Score =  136 bits (342), Expect = 1e-29
 Identities = 66/82 (80%), Positives = 66/82 (80%)
 Frame = +1

Query: 103 MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVND 282
           MTF              VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV D
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 283 GYTLPKLYAKMQYCVSCAIHSH 348
            YTLPKLYAKMQYCVSCAIHSH
Sbjct: 61  TYTLPKLYAKMQYCVSCAIHSH 82


Top