BLASTX nr result

ID: Cimicifuga21_contig00004242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004242
         (1465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271656.1| PREDICTED: eukaryotic peptide chain release ...   762   0.0  
emb|CAN63440.1| hypothetical protein VITISV_020937 [Vitis vinifera]   762   0.0  
ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release ...   761   0.0  
ref|XP_003518164.1| PREDICTED: eukaryotic peptide chain release ...   760   0.0  
ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release ...   759   0.0  

>ref|XP_002271656.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Vitis
            vinifera]
          Length = 437

 Score =  762 bits (1967), Expect = 0.0
 Identities = 382/421 (90%), Positives = 397/421 (94%)
 Frame = +3

Query: 201  MADAQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 380
            MAD  ETDKN                RGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1    MADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 381  IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN 560
            IKSRVNRQSVLGAITSAQQRLKLYN+VPPNGLVLYTGTIVT+DGKEKKVTIDFEPF+PIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 561  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG 740
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTRE+LHKFTVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 741  RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 920
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNVSGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 921  DMFDPRLGAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 1100
            DMFDPRL AKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1101 KYVFGVDDTLKALEMGAVETLIVWENLDINRYALKHSVTGETIIKHLNKEQEAIQSNFRD 1280
            KYVFGVDDTLKALEMGAVETLIVWENLDI+RY LK+++TGE +IKHLNKEQE+ QS+FRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDISRYVLKNNITGEIVIKHLNKEQESNQSHFRD 360

Query: 1281 AVTSAELEVQEKLSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 1460
              TSAELEVQEK+SLLEWFANEYK+FGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
Sbjct: 361  TATSAELEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420

Query: 1461 R 1463
            R
Sbjct: 421  R 421


>emb|CAN63440.1| hypothetical protein VITISV_020937 [Vitis vinifera]
          Length = 437

 Score =  762 bits (1967), Expect = 0.0
 Identities = 382/421 (90%), Positives = 397/421 (94%)
 Frame = +3

Query: 201  MADAQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 380
            MAD  ETDKN                RGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1    MADGHETDKNIEIWNIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 381  IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN 560
            IKSRVNRQSVLGAITSAQQRLKLYN+VPPNGLVLYTGTIVT+DGKEKKVTIDFEPF+PIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 561  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG 740
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTRE+LHKFTVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 741  RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 920
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNVSGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 921  DMFDPRLGAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 1100
            DMFDPRL AKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1101 KYVFGVDDTLKALEMGAVETLIVWENLDINRYALKHSVTGETIIKHLNKEQEAIQSNFRD 1280
            KYVFGVDDTLKALEMGAVETLIVWENLDI+RY LK+++TGE +IKHLNKEQE+ QS+FRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDISRYVLKNNITGEIVIKHLNKEQESNQSHFRD 360

Query: 1281 AVTSAELEVQEKLSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 1460
              TSAELEVQEK+SLLEWFANEYK+FGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
Sbjct: 361  TATSAELEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420

Query: 1461 R 1463
            R
Sbjct: 421  R 421


>ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Cucumis sativus]
          Length = 436

 Score =  761 bits (1966), Expect = 0.0
 Identities = 383/421 (90%), Positives = 397/421 (94%)
 Frame = +3

Query: 201  MADAQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 380
            MADA ETDKN                RGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1    MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 381  IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN 560
            IKSRVNRQSVLGAITSAQQRLKLYN+VPPNGLVLYTGTIVT+DGKEKKVTIDFEPF+PIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 561  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG 740
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTRE+LHKF+VDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 741  RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 920
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNV+GLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 240

Query: 921  DMFDPRLGAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 1100
            DMFDPRL AKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1101 KYVFGVDDTLKALEMGAVETLIVWENLDINRYALKHSVTGETIIKHLNKEQEAIQSNFRD 1280
            KYVFGVDDTLKALEMGAVE LIVWENLDINRY LK++ TGE IIKHLNKEQEA QSNFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNAATGEIIIKHLNKEQEANQSNFRD 360

Query: 1281 AVTSAELEVQEKLSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 1460
            + TSAELEVQEK++LLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLD+
Sbjct: 361  SATSAELEVQEKMALLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 420

Query: 1461 R 1463
            R
Sbjct: 421  R 421


>ref|XP_003518164.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Glycine max]
          Length = 437

 Score =  760 bits (1963), Expect = 0.0
 Identities = 381/421 (90%), Positives = 397/421 (94%)
 Frame = +3

Query: 201  MADAQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 380
            M+D+QE+DKN                RGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1    MSDSQESDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 381  IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN 560
            IKSRVNRQSVLGAITSAQQRLKLYN+VPPNGLVLYTGTIVT+DGKEKKVTIDFEPFKPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN 120

Query: 561  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG 740
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTRE+LHKFTVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 741  RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 920
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNVSGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 921  DMFDPRLGAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 1100
            DMFDPRL AKILNVVDVSYGGENGFNQAIELS+EILSNVKFIQEKRLIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1101 KYVFGVDDTLKALEMGAVETLIVWENLDINRYALKHSVTGETIIKHLNKEQEAIQSNFRD 1280
            KYVFGV+DTLKALEMGAVETLIVWENLDINRY LK+ +TGE +IKHLNKEQEA QSNFRD
Sbjct: 301  KYVFGVEDTLKALEMGAVETLIVWENLDINRYVLKNGITGEIVIKHLNKEQEANQSNFRD 360

Query: 1281 AVTSAELEVQEKLSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 1460
              TSAELEVQEK+ LLEWFANEYKKFGC+LEFVTNKSQEGSQFCRGFGGIGGILRYQLD+
Sbjct: 361  LATSAELEVQEKMPLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 420

Query: 1461 R 1463
            R
Sbjct: 421  R 421


>ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Cucumis sativus] gi|449487371|ref|XP_004157593.1|
            PREDICTED: eukaryotic peptide chain release factor
            subunit 1-3-like [Cucumis sativus]
          Length = 436

 Score =  759 bits (1959), Expect = 0.0
 Identities = 382/421 (90%), Positives = 396/421 (94%)
 Frame = +3

Query: 201  MADAQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 380
            MADA ETDKN                RGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1    MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 381  IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN 560
            IKSRVNRQSVLGAITSAQQRLKLYN+VPPNGLVLYTGTIVT+DGKEKKVTIDFEPF+PIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 561  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG 740
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTRE+LHKF+VDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 741  RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 920
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNV+GLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 240

Query: 921  DMFDPRLGAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 1100
            DMFDPRL AKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1101 KYVFGVDDTLKALEMGAVETLIVWENLDINRYALKHSVTGETIIKHLNKEQEAIQSNFRD 1280
            KYVFGVDDTLKALEMGAVE LIVWENLDINRY LK++ TGE IIKHLNKEQEA QSNFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNASTGEIIIKHLNKEQEANQSNFRD 360

Query: 1281 AVTSAELEVQEKLSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 1460
              TS+ELEVQEK++LLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLD+
Sbjct: 361  PATSSELEVQEKMALLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 420

Query: 1461 R 1463
            R
Sbjct: 421  R 421


Top