BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004240
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331425.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40
ref|XP_002308136.1| predicted protein [Populus trichocarpa] gi|2...   165   9e-39
gb|AFK39323.1| unknown [Medicago truncatula]                          164   1e-38
ref|XP_003604547.1| 30S ribosomal protein S17 [Medicago truncatu...   164   1e-38
ref|XP_003618144.1| 30S ribosomal protein S17 [Medicago truncatu...   162   7e-38

>ref|XP_002331425.1| predicted protein [Populus trichocarpa] gi|222873639|gb|EEF10770.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  170 bits (431), Expect = 2e-40
 Identities = 87/105 (82%), Positives = 90/105 (85%)
 Frame = +1

Query: 55  MKPVVGMVVSNKMQKSVVVAVDRLFHHKLYNRYIKRTSKFMAHDEKDECNIGDRVRLDPS 234
           MK VVGMVVSNKMQKSVVVAVDRLFHHKLYNRY+KRTSKFMAHDE D CNIGDRVRLDPS
Sbjct: 1   MKSVVGMVVSNKMQKSVVVAVDRLFHHKLYNRYVKRTSKFMAHDENDLCNIGDRVRLDPS 60

Query: 235 RPLSKRKHWVVAEILKKARIYVPPPAQPRFSDSSNKTGTPVATSS 369
           RPLSKRKHWVVAEILKKARIYVPP A    S +SN  G   + SS
Sbjct: 61  RPLSKRKHWVVAEILKKARIYVPPSAGD--SGASNTAGMKASASS 103


>ref|XP_002308136.1| predicted protein [Populus trichocarpa] gi|222854112|gb|EEE91659.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  165 bits (417), Expect = 9e-39
 Identities = 81/105 (77%), Positives = 89/105 (84%)
 Frame = +1

Query: 55  MKPVVGMVVSNKMQKSVVVAVDRLFHHKLYNRYIKRTSKFMAHDEKDECNIGDRVRLDPS 234
           MK VVGMVVSNKMQKSVVVAVDRLFHHKLYNRY+KRTSKFMAHDE + CNIGDRVRLDPS
Sbjct: 1   MKSVVGMVVSNKMQKSVVVAVDRLFHHKLYNRYVKRTSKFMAHDENNLCNIGDRVRLDPS 60

Query: 235 RPLSKRKHWVVAEILKKARIYVPPPAQPRFSDSSNKTGTPVATSS 369
           RPLSKRK+WVVAEILKKARIYVPP A    +  +     P +++S
Sbjct: 61  RPLSKRKNWVVAEILKKARIYVPPSAADNAASKTKGAEAPTSSTS 105


>gb|AFK39323.1| unknown [Medicago truncatula]
          Length = 103

 Score =  164 bits (415), Expect = 1e-38
 Identities = 84/104 (80%), Positives = 89/104 (85%)
 Frame = +1

Query: 55  MKPVVGMVVSNKMQKSVVVAVDRLFHHKLYNRYIKRTSKFMAHDEKDECNIGDRVRLDPS 234
           MK VVGMVVSNKMQKSVVVAVDRLFHHK++NRYIKRTSKFMAHDE + CNIGDRVRLD S
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFHHKMFNRYIKRTSKFMAHDENNLCNIGDRVRLDSS 60

Query: 235 RPLSKRKHWVVAEILKKARIYVPPPAQPRFSDSSNKTGTPVATS 366
           RPLSK KHWVVAEILKKARIYVPP A    + SSN  G P +TS
Sbjct: 61  RPLSKHKHWVVAEILKKARIYVPPSATVSENASSNSVG-PTSTS 103


>ref|XP_003604547.1| 30S ribosomal protein S17 [Medicago truncatula]
           gi|355505602|gb|AES86744.1| 30S ribosomal protein S17
           [Medicago truncatula]
          Length = 172

 Score =  164 bits (415), Expect = 1e-38
 Identities = 84/104 (80%), Positives = 89/104 (85%)
 Frame = +1

Query: 55  MKPVVGMVVSNKMQKSVVVAVDRLFHHKLYNRYIKRTSKFMAHDEKDECNIGDRVRLDPS 234
           MK VVGMVVSNKMQKSVVVAVDRLFHHK++NRYIKRTSKFMAHDE + CNIGDRVRLD S
Sbjct: 70  MKQVVGMVVSNKMQKSVVVAVDRLFHHKMFNRYIKRTSKFMAHDENNLCNIGDRVRLDSS 129

Query: 235 RPLSKRKHWVVAEILKKARIYVPPPAQPRFSDSSNKTGTPVATS 366
           RPLSK KHWVVAEILKKARIYVPP A    + SSN  G P +TS
Sbjct: 130 RPLSKHKHWVVAEILKKARIYVPPSATVSENASSNSVG-PTSTS 172


>ref|XP_003618144.1| 30S ribosomal protein S17 [Medicago truncatula]
           gi|355493159|gb|AES74362.1| 30S ribosomal protein S17
           [Medicago truncatula]
          Length = 103

 Score =  162 bits (409), Expect = 7e-38
 Identities = 81/95 (85%), Positives = 85/95 (89%)
 Frame = +1

Query: 55  MKPVVGMVVSNKMQKSVVVAVDRLFHHKLYNRYIKRTSKFMAHDEKDECNIGDRVRLDPS 234
           MK VVGMVVSNKMQKSVVVAVDRLFHHK++NRYIKRTSKFMAHDE + CNIGDRVRLD S
Sbjct: 1   MKEVVGMVVSNKMQKSVVVAVDRLFHHKMFNRYIKRTSKFMAHDENNLCNIGDRVRLDSS 60

Query: 235 RPLSKRKHWVVAEILKKARIYVPPPAQPRFSDSSN 339
           RPLSKRKHWVVAEILKKARIYVPP A    + SSN
Sbjct: 61  RPLSKRKHWVVAEILKKARIYVPPSATVSENASSN 95