BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004230
         (1454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG52189.1|AC012329_16 hypothetical protein; 59299-58097 [Ara...    65   1e-14
ref|NP_190514.1| F-box protein [Arabidopsis thaliana] gi|7533704...    65   1e-14
ref|XP_002877677.1| hypothetical protein ARALYDRAFT_906230 [Arab...    59   1e-13
ref|XP_003612650.1| F-box family protein [Medicago truncatula] g...    66   7e-13
ref|XP_003612646.1| F-box family protein [Medicago truncatula] g...    65   9e-13

>gb|AAG52189.1|AC012329_16 hypothetical protein; 59299-58097 [Arabidopsis thaliana]
          Length = 400

 Score = 65.5 bits (158), Expect(2) = 1e-14
 Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
 Frame = -1

Query: 977 YSINDKSGSAIEIHHRCRPPSPYYFYVC-------CCNGLLFFANYLECLLVLYNPVTRE 819
           Y I+D++ + + + +    P  Y F VC       C +     +   +  +++ NP T +
Sbjct: 103 YLISDQNSNLVVVDNHMDVPKDYSFGVCVPVCGLMCTSNEWVLSRKRDARMMICNPSTGQ 162

Query: 818 TKTLPKPDCFRHKTFFKAGFGFDKHSRKYKIVCWN------KVNHSVVEVFTFGQSPDSS 657
            K+LPK    R         G++   ++YK++C        K      +V T G    + 
Sbjct: 163 FKSLPKVRSCRGNVI--TYIGYNPIEKQYKVLCMTIREKPFKFKAEEHQVLTLG----TG 216

Query: 656 SSFWRKVECGSTKPINHLPWYGQPICANGALCW----RNSKDNTVVSFRLADEKFLTIPG 489
              WR +EC     ++H P+Y   IC NG L +      SK+   VSF + DE F+ IP 
Sbjct: 217 KLKWRMLECS----VDHYPYYHGSICINGVLFYLAMKSESKEYMTVSFHMKDENFMFIPN 272

Query: 488 PTDIQDRGICTLCESRDRL------CIMFLDFHRLQTIDMWVLTDYDKPMWVEHTILLP 330
               QD  + TL   + RL         F+D   +   ++W+L D     W+    +LP
Sbjct: 273 ----QDL-LSTLINYKGRLGGIRHKSFGFMDGGDV-GFELWIL-DVVNQEWIRSIHVLP 324



 Score = 41.6 bits (96), Expect(2) = 1e-14
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
 Frame = -3

Query: 1251 PEEILMEILLRLPVKSLFRFRSVCWRWNSLIRDSTFADSYLVQSN----------KSGFW 1102
            P ++++EIL R+P KS  RFR V   WNSL+R     + +L +S+            G W
Sbjct: 36   PTDLMVEILSRVPAKSAARFRCVSNDWNSLLRSPYLTNLFLKRSSARPHLLITFQAEGKW 95

Query: 1101 SF 1096
            SF
Sbjct: 96   SF 97


>ref|NP_190514.1| F-box protein [Arabidopsis thaliana]
           gi|75337046|sp|Q9SCL2.1|FB197_ARATH RecName: Full=F-box
           protein At3g49450 gi|6561946|emb|CAB62450.1| putative
           protein [Arabidopsis thaliana]
           gi|67633684|gb|AAY78766.1| F-box family protein
           [Arabidopsis thaliana] gi|332645024|gb|AEE78545.1| F-box
           protein [Arabidopsis thaliana]
          Length = 397

 Score = 65.5 bits (158), Expect(2) = 1e-14
 Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
 Frame = -1

Query: 977 YSINDKSGSAIEIHHRCRPPSPYYFYVC-------CCNGLLFFANYLECLLVLYNPVTRE 819
           Y I+D++ + + + +    P  Y F VC       C +     +   +  +++ NP T +
Sbjct: 100 YLISDQNSNLVVVDNHMDVPKDYSFGVCVPVCGLMCTSNEWVLSRKRDARMMICNPSTGQ 159

Query: 818 TKTLPKPDCFRHKTFFKAGFGFDKHSRKYKIVCWN------KVNHSVVEVFTFGQSPDSS 657
            K+LPK    R         G++   ++YK++C        K      +V T G    + 
Sbjct: 160 FKSLPKVRSCRGNVI--TYIGYNPIEKQYKVLCMTIREKPFKFKAEEHQVLTLG----TG 213

Query: 656 SSFWRKVECGSTKPINHLPWYGQPICANGALCW----RNSKDNTVVSFRLADEKFLTIPG 489
              WR +EC     ++H P+Y   IC NG L +      SK+   VSF + DE F+ IP 
Sbjct: 214 KLKWRMLECS----VDHYPYYHGSICINGVLFYLAMKSESKEYMTVSFHMKDENFMFIPN 269

Query: 488 PTDIQDRGICTLCESRDRL------CIMFLDFHRLQTIDMWVLTDYDKPMWVEHTILLP 330
               QD  + TL   + RL         F+D   +   ++W+L D     W+    +LP
Sbjct: 270 ----QDL-LSTLINYKGRLGGIRHKSFGFMDGGDV-GFELWIL-DVVNQEWIRSIHVLP 321



 Score = 41.6 bits (96), Expect(2) = 1e-14
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
 Frame = -3

Query: 1251 PEEILMEILLRLPVKSLFRFRSVCWRWNSLIRDSTFADSYLVQSN----------KSGFW 1102
            P ++++EIL R+P KS  RFR V   WNSL+R     + +L +S+            G W
Sbjct: 33   PTDLMVEILSRVPAKSAARFRCVSNDWNSLLRSPYLTNLFLKRSSARPHLLITFQAEGKW 92

Query: 1101 SF 1096
            SF
Sbjct: 93   SF 94


>ref|XP_002877677.1| hypothetical protein ARALYDRAFT_906230 [Arabidopsis lyrata subsp.
           lyrata] gi|297323515|gb|EFH53936.1| hypothetical protein
           ARALYDRAFT_906230 [Arabidopsis lyrata subsp. lyrata]
          Length = 396

 Score = 58.5 bits (140), Expect(2) = 1e-13
 Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 19/235 (8%)
 Frame = -1

Query: 977 YSINDKSGSAIEIHHRCRPPSPYYFYVC-------CCNGLLFFANYLECLLVLYNPVTRE 819
           Y I+D++ + + + +    P  Y F VC       C       +   +  +++ NP TR+
Sbjct: 103 YLISDQNSNLVVVDNHMDVPKDYSFGVCEPVCGLLCTRDEWVLSRKKDARMMICNPSTRQ 162

Query: 818 TKTLPKPDCFRHKTFFKAGFGFDKHSRKYKIVCWNKVNHSVV------EVFTFGQSPDSS 657
            ++LPK    R+K       G+D   ++YK++C        +      +V T G    + 
Sbjct: 163 FQSLPKVRSRRNKVI--TYIGYDPIEKEYKVLCMTICERPYMFKAEEHQVLTLG----TG 216

Query: 656 SSFWRKVECGSTKPINHLPWYGQPICANGALCWRNSKDNT----VVSFRLADEKFLTIPG 489
              WR ++C     + H P + + IC NG L +   KD T    +V F +  EKF  I  
Sbjct: 217 KLKWRMLKCF----VEHFP-HHKEICINGVLYYLAVKDETREDIIVCFHVKHEKFQFI-- 269

Query: 488 PTDIQDRGICTLCESRDRLCIMFLDFHR--LQTIDMWVLTDYDKPMWVEHTILLP 330
              +    + TL     +L  +   F    +   ++W L D +K  W  H  +LP
Sbjct: 270 ---LNKAPLSTLINYNGKLGGIRHGFMEGGVAGYELWDL-DIEKEDWTRHIHILP 320



 Score = 45.4 bits (106), Expect(2) = 1e-13
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
 Frame = -3

Query: 1251 PEEILMEILLRLPVKSLFRFRSVCWRWNSLIRDSTFADSYLVQS----------NKSGFW 1102
            P ++++EIL R+P KS  +F  V   WNSL+R S F + YL +S             G W
Sbjct: 36   PMDLMVEILSRVPAKSAAKFHCVSKNWNSLLRSSYFTNLYLTRSPTRPRLLITFQAEGKW 95

Query: 1101 SF 1096
            SF
Sbjct: 96   SF 97


>ref|XP_003612650.1| F-box family protein [Medicago truncatula]
            gi|355513985|gb|AES95608.1| F-box family protein
            [Medicago truncatula]
          Length = 441

 Score = 65.9 bits (159), Expect(2) = 7e-13
 Identities = 66/239 (27%), Positives = 97/239 (40%), Gaps = 38/239 (15%)
 Frame = -1

Query: 1019 FSQVFDRDTESYRFYSINDKSGSAIEIHHRCRPPSPY------YFYVCCCNGLLFFAN-Y 861
            F + FD D  ++     N K    +   +    P+PY      +  V  CNGLL  +  Y
Sbjct: 101  FRRAFDIDVVNF-----NPKFKLPLRNANDTYQPTPYKPEDDKFSVVNSCNGLLCLSEPY 155

Query: 860  LECLLVLYNPVTRETKTLP---------KPDCFRHKTFFKAGFGFDKHSRKYKIV-CWN- 714
                LV+ NP+  E   LP         KP C        A  GF   + +YK++  W  
Sbjct: 156  TVNHLVVCNPIIGEFIRLPEAIGIANTRKPIC--------AALGFQPKTNEYKVIRMWKR 207

Query: 713  ------KVNHSVVEVFTFGQSPDSSSSFWRKVECGSTKPINHLPWYGQPICANGALCWRN 552
                  K +  VVE+ T G      ++ WR VE     P+      G P C NGAL W N
Sbjct: 208  CDGWCYKSDVMVVEMHTLG------TATWRNVE---VDPMFSFTRLGSPTCVNGALHWIN 258

Query: 551  ----SKDNTVVSFRLADEKFLTIPGP----------TDIQDRGICTLCESRDRLCIMFL 417
                +K  +++ F    EKF + P P          T ++ +G   +CES    C+++L
Sbjct: 259  YDDKNKTRSILCFNFESEKFQSFPSPPHPHHKRLSITMVELKGFLYICESTVNSCVVWL 317



 Score = 35.4 bits (80), Expect(2) = 7e-13
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -3

Query: 1257 DTPEEILMEILLRLPVKSLFRFRSVCWRWNSLIRDSTFADSY 1132
            D    I+  ILL+LP+K +   + VC  WN+LI +  FA  Y
Sbjct: 28   DLSSLIITNILLQLPIKDVSICKCVCKTWNALISEPYFATLY 69


>ref|XP_003612646.1| F-box family protein [Medicago truncatula]
            gi|355513981|gb|AES95604.1| F-box family protein
            [Medicago truncatula]
          Length = 441

 Score = 65.5 bits (158), Expect(2) = 9e-13
 Identities = 66/239 (27%), Positives = 97/239 (40%), Gaps = 38/239 (15%)
 Frame = -1

Query: 1019 FSQVFDRDTESYRFYSINDKSGSAIEIHHRCRPPSPY------YFYVCCCNGLLFFAN-Y 861
            F + FD D  ++     N K    +   +    P+PY      +  V  CNGLL  +  Y
Sbjct: 101  FRRAFDIDVVNF-----NPKFKLPLRNANDTYQPTPYKPEDDKFGVVNSCNGLLCLSEPY 155

Query: 860  LECLLVLYNPVTRETKTLP---------KPDCFRHKTFFKAGFGFDKHSRKYKIV-CWN- 714
                LV+ NP+  E   LP         KP C        A  GF   + +YK++  W  
Sbjct: 156  TVNHLVVCNPIIGEFIRLPEAIGIANTRKPIC--------AALGFQPKTNEYKVIRMWKR 207

Query: 713  ------KVNHSVVEVFTFGQSPDSSSSFWRKVECGSTKPINHLPWYGQPICANGALCWRN 552
                  K +  VVE+ T G      ++ WR VE     P+      G P C NGAL W N
Sbjct: 208  CDGWCYKSDVMVVEMHTLG------TTTWRNVE---VDPMFSFTRLGSPTCVNGALHWIN 258

Query: 551  ----SKDNTVVSFRLADEKFLTIPGP----------TDIQDRGICTLCESRDRLCIMFL 417
                +K  +++ F    EKF + P P          T ++ +G   +CES    C+++L
Sbjct: 259  YDDKNKTRSILCFNFESEKFQSFPSPPHPHHKRLSITMVELKGFLYICESTVNSCVVWL 317



 Score = 35.4 bits (80), Expect(2) = 9e-13
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -3

Query: 1257 DTPEEILMEILLRLPVKSLFRFRSVCWRWNSLIRDSTFADSY 1132
            D    I+  ILL+LP+K +   + VC  WN+LI +  FA  Y
Sbjct: 28   DLSSLIITNILLQLPIKDVSICKCVCKTWNALISEPYFATLY 69