BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004217
         (1906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284282.1| PREDICTED: auxin-responsive protein IAA27-li...   428   e-117
ref|XP_002284118.1| PREDICTED: auxin-responsive protein IAA27 is...   416   e-113
ref|XP_003632858.1| PREDICTED: auxin-responsive protein IAA27-li...   403   e-110
gb|ADL36581.1| ARF domain class transcription factor [Malus x do...   388   e-105
ref|XP_002303297.1| predicted protein [Populus trichocarpa] gi|2...   383   e-104

>ref|XP_002284282.1| PREDICTED: auxin-responsive protein IAA27-like isoform 1 [Vitis
            vinifera]
          Length = 343

 Score =  428 bits (1100), Expect = e-117
 Identities = 231/340 (67%), Positives = 253/340 (74%), Gaps = 13/340 (3%)
 Frame = -2

Query: 1281 EHDYIGLXXXXXXXXXXXXXS---------EDENNNVLNLKQTELRLGLPGSESPERRAX 1129
            EHDYIGL             S         E E +  LNL++TELRLGLPGSESPER+  
Sbjct: 6    EHDYIGLSEAPSMERASDKISSASSSTISSESEKSTALNLRETELRLGLPGSESPERKPQ 65

Query: 1128 XXXXXXXXXXVEDKNGYSLGVLKNFVSGAKRGFSDAIDXXXXXXXXXXXXSEVDLAKGGV 949
                       +  NGYSLG LK FVSGAKRGFSDAID            SEVDL KG V
Sbjct: 66   LGVSLFGKDLEDKTNGYSLGSLKGFVSGAKRGFSDAIDGSGKWVFSVNGGSEVDLGKGAV 125

Query: 948  LFSPRGGNGGKPLAGLENGS-QPSGLAATAMKDVV-PLSPKSVQEKKPQIGSAIDQS--P 781
            LFSPRGGNG KPL GL+N S Q S +   AMKDV  P SPK VQEKKPQ  +A + +  P
Sbjct: 126  LFSPRGGNGVKPLGGLDNNSAQKSCMPGPAMKDVAAPSSPKPVQEKKPQASAANEHASAP 185

Query: 780  PSKAQVVGWPPIRSFRKNTMAANPAKNSDEKEGKSGSGCLYIKVSMDGAPYLRKVDLKTY 601
             +KAQVVGWPPIRSFRKNTMA++ AKN+++ EGKSG GCLY+KVSMDGAPYLRKVDLK Y
Sbjct: 186  AAKAQVVGWPPIRSFRKNTMASS-AKNNEDAEGKSGLGCLYVKVSMDGAPYLRKVDLKIY 244

Query: 600  SNYTELSAALEKMFSCFTIGQCGSHGVLPGRDGLSESRLMDLLHGSECVLTYEDKDGDWM 421
             NY ELS+ALEKMFSCFTIGQCGSHG LPGRDGL+ES LMDLLHGSE VLTYEDKDGDWM
Sbjct: 245  CNYMELSSALEKMFSCFTIGQCGSHG-LPGRDGLTESHLMDLLHGSEYVLTYEDKDGDWM 303

Query: 420  LVGDVPWDMFIDSCRRLRIMKGSEAIGLAPRAMEKCKNRN 301
            LVGDVPW+MF +SC+RLRIMKGSEAIGLAPRAMEKCKNRN
Sbjct: 304  LVGDVPWEMFTESCKRLRIMKGSEAIGLAPRAMEKCKNRN 343


>ref|XP_002284118.1| PREDICTED: auxin-responsive protein IAA27 isoform 1 [Vitis vinifera]
          Length = 320

 Score =  416 bits (1068), Expect = e-113
 Identities = 223/329 (67%), Positives = 242/329 (73%), Gaps = 2/329 (0%)
 Frame = -2

Query: 1281 EHDYIGLXXXXXXXXXXXXXSEDENNNVLNLKQTELRLGLPGSESPERRAXXXXXXXXXX 1102
            EHDYIGL             ++ E +N LNLK TELRLGLPGSESPER            
Sbjct: 6    EHDYIGLSEVSSMESSEKLTTDSEGSNGLNLKATELRLGLPGSESPER--------IDSV 57

Query: 1101 XVEDKNGYSLGVLKNFVSGAKRGFSDAIDXXXXXXXXXXXXS-EVDLAKGGVLFSPRGGN 925
               DKNGY LGVLKN VSGAKRGFSDAID              E DL KGG LFSPRGGN
Sbjct: 58   GGLDKNGYPLGVLKNLVSGAKRGFSDAIDGGSGKWVFSGSGGSETDLTKGGGLFSPRGGN 117

Query: 924  GG-KPLAGLENGSQPSGLAATAMKDVVPLSPKSVQEKKPQIGSAIDQSPPSKAQVVGWPP 748
            GG K L G E+ +Q S L      DVVP SPK + EKKPQI +     P +KAQVVGWPP
Sbjct: 118  GGGKHLGGSESNNQHSSLGTPVKNDVVPQSPKPMHEKKPQISA-----PAAKAQVVGWPP 172

Query: 747  IRSFRKNTMAANPAKNSDEKEGKSGSGCLYIKVSMDGAPYLRKVDLKTYSNYTELSAALE 568
            IRSFRKN+MA+N  KN ++ EGK GSGCLY+KVSMDGAPYLRKVDLK YS Y ELS+ALE
Sbjct: 173  IRSFRKNSMASNLPKNDEDAEGKLGSGCLYVKVSMDGAPYLRKVDLKLYSTYMELSSALE 232

Query: 567  KMFSCFTIGQCGSHGVLPGRDGLSESRLMDLLHGSECVLTYEDKDGDWMLVGDVPWDMFI 388
            KMFSCFTIGQCGS+GV P RDGLSESRLMDLLHGSE VLTYEDKDGDWMLVGDVPW+MF 
Sbjct: 233  KMFSCFTIGQCGSNGV-PIRDGLSESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFT 291

Query: 387  DSCRRLRIMKGSEAIGLAPRAMEKCKNRN 301
            DSC+R+RIMK SEAIGLAPRAMEKCK+RN
Sbjct: 292  DSCKRMRIMKSSEAIGLAPRAMEKCKSRN 320


>ref|XP_003632858.1| PREDICTED: auxin-responsive protein IAA27-like isoform 2 [Vitis
            vinifera]
          Length = 334

 Score =  403 bits (1036), Expect = e-110
 Identities = 222/340 (65%), Positives = 244/340 (71%), Gaps = 13/340 (3%)
 Frame = -2

Query: 1281 EHDYIGLXXXXXXXXXXXXXS---------EDENNNVLNLKQTELRLGLPGSESPERRAX 1129
            EHDYIGL             S         E E +  LNL++TELRLGLPGSESPER+  
Sbjct: 6    EHDYIGLSEAPSMERASDKISSASSSTISSESEKSTALNLRETELRLGLPGSESPERKPQ 65

Query: 1128 XXXXXXXXXXVEDKNGYSLGVLKNFVSGAKRGFSDAIDXXXXXXXXXXXXSEVDLAKGGV 949
                       +  NGYSLG LK FVSGAKRGFSDAID            SEVDL KG V
Sbjct: 66   LGVSLFGKDLEDKTNGYSLGSLKGFVSGAKRGFSDAIDGSGKWVFSVNGGSEVDLGKGAV 125

Query: 948  LFSPRGGNGGKPLAGLENGS-QPSGLAATAMKDVV-PLSPKSVQEKKPQIGSAIDQS--P 781
            LFSPRGGNG KPL GL+N S Q S +   AMKDV  P SPK VQEKKPQ  +A + +  P
Sbjct: 126  LFSPRGGNGVKPLGGLDNNSAQKSCMPGPAMKDVAAPSSPKPVQEKKPQASAANEHASAP 185

Query: 780  PSKAQVVGWPPIRSFRKNTMAANPAKNSDEKEGKSGSGCLYIKVSMDGAPYLRKVDLKTY 601
             +KAQVVGWPPIRSFRKNTMA++ AKN+++ EGKSG GCLY+KVSMDGAPYLRKVDLK Y
Sbjct: 186  AAKAQVVGWPPIRSFRKNTMASS-AKNNEDAEGKSGLGCLYVKVSMDGAPYLRKVDLKIY 244

Query: 600  SNYTELSAALEKMFSCFTIGQCGSHGVLPGRDGLSESRLMDLLHGSECVLTYEDKDGDWM 421
             NY ELS+ALEKMFSCFTIG          RDGL+ES LMDLLHGSE VLTYEDKDGDWM
Sbjct: 245  CNYMELSSALEKMFSCFTIG----------RDGLTESHLMDLLHGSEYVLTYEDKDGDWM 294

Query: 420  LVGDVPWDMFIDSCRRLRIMKGSEAIGLAPRAMEKCKNRN 301
            LVGDVPW+MF +SC+RLRIMKGSEAIGLAPRAMEKCKNRN
Sbjct: 295  LVGDVPWEMFTESCKRLRIMKGSEAIGLAPRAMEKCKNRN 334


>gb|ADL36581.1| ARF domain class transcription factor [Malus x domestica]
          Length = 319

 Score =  388 bits (997), Expect = e-105
 Identities = 210/329 (63%), Positives = 237/329 (72%), Gaps = 2/329 (0%)
 Frame = -2

Query: 1281 EHDYIGLXXXXXXXXXXXXXSEDENNNVLNLKQTELRLGLPGSESPERRAXXXXXXXXXX 1102
            EHDYIGL                  ++ LNLK TELRLGLPGS+SPER            
Sbjct: 6    EHDYIGLSPSMET---------STKSDALNLKATELRLGLPGSQSPERDGGGGGGGGVE- 55

Query: 1101 XVEDKNGYSLGVLKNFVSGAKRGFSDAIDXXXXXXXXXXXXS-EVDLAKGGVLFSPRGGN 925
              E   G+S+  +K  VSGAKRGFSDAID              EV+L KGG L SPRG N
Sbjct: 56   --EKATGFSVCGVKGLVSGAKRGFSDAIDGASGKWVFSGSGGSEVELGKGGNLLSPRGVN 113

Query: 924  GGKPLA-GLENGSQPSGLAATAMKDVVPLSPKSVQEKKPQIGSAIDQSPPSKAQVVGWPP 748
             GK LA G E  +QP+GLA +A+KD V  SPK + EKK Q GSA   +P +KAQVVGWPP
Sbjct: 114  AGKALAAGCEPSNQPTGLAGSAVKDGVQQSPKPLHEKKSQ-GSAGSTAPAAKAQVVGWPP 172

Query: 747  IRSFRKNTMAANPAKNSDEKEGKSGSGCLYIKVSMDGAPYLRKVDLKTYSNYTELSAALE 568
            IRSFRKN+MA+ P+KN D+ EGK G+GCLY+KVSMDGAPYLRKVDLKTY +Y +LS ALE
Sbjct: 173  IRSFRKNSMASVPSKNGDDAEGKMGAGCLYVKVSMDGAPYLRKVDLKTYGSYLDLSLALE 232

Query: 567  KMFSCFTIGQCGSHGVLPGRDGLSESRLMDLLHGSECVLTYEDKDGDWMLVGDVPWDMFI 388
            KMFSCFTIGQCGSHG    RDGLSESRLMDLLHG+E VLTYEDKDGDWMLVGDVPW+MF 
Sbjct: 233  KMFSCFTIGQCGSHGA--SRDGLSESRLMDLLHGAEYVLTYEDKDGDWMLVGDVPWEMFT 290

Query: 387  DSCRRLRIMKGSEAIGLAPRAMEKCKNRN 301
            DSC+R+RIMK SEAIGLAPRAM+KCKN N
Sbjct: 291  DSCKRMRIMKSSEAIGLAPRAMQKCKNSN 319


>ref|XP_002303297.1| predicted protein [Populus trichocarpa] gi|222840729|gb|EEE78276.1|
            predicted protein [Populus trichocarpa]
          Length = 349

 Score =  383 bits (984), Expect = e-104
 Identities = 208/312 (66%), Positives = 230/312 (73%), Gaps = 7/312 (2%)
 Frame = -2

Query: 1215 DENNNVLNLKQTELRLGLPGSESPERR----AXXXXXXXXXXXVEDKNGYSLGVLKNFVS 1048
            +  N  LNLK+TELRLGLPG +SPER+    A             + NGY L  LKN VS
Sbjct: 48   NSTNTSLNLKETELRLGLPGYQSPERKLTLPAAGVSLFGKDIDTNNTNGYPLRPLKNLVS 107

Query: 1047 GAKRGFSDAI-DXXXXXXXXXXXXSEVDLAKGGVLFSPRGGNGGKPLAGLENGSQPSGLA 871
            G KRGFSDAI              SEVDL KG +LFSPRG NG          SQ S +A
Sbjct: 108  GTKRGFSDAIVGSSGKWVFSGSNGSEVDLGKGAILFSPRGDNGN---------SQKSCVA 158

Query: 870  ATAMKDVVPLSPKSVQEKKPQIGSAIDQS--PPSKAQVVGWPPIRSFRKNTMAANPAKNS 697
              A KD V  SPK VQEK  Q+ +A + S  P +KAQVVGWPPIRSFRKNTMA++  KN+
Sbjct: 159  GPAKKDDVAQSPKPVQEKISQVAAANENSSAPAAKAQVVGWPPIRSFRKNTMASSLVKNN 218

Query: 696  DEKEGKSGSGCLYIKVSMDGAPYLRKVDLKTYSNYTELSAALEKMFSCFTIGQCGSHGVL 517
            ++ EGKSG GCLY+KVSMDGAPYLRKVDLKTYSNY ELS+ALEKMFSCFTIGQCGSHG L
Sbjct: 219  EDVEGKSGYGCLYVKVSMDGAPYLRKVDLKTYSNYLELSSALEKMFSCFTIGQCGSHG-L 277

Query: 516  PGRDGLSESRLMDLLHGSECVLTYEDKDGDWMLVGDVPWDMFIDSCRRLRIMKGSEAIGL 337
             G+DGL+ESRL D+LHGSE VLTYEDKDGDWMLVGDVPWDMF +SCRRLRIMKGSEAIGL
Sbjct: 278  RGQDGLTESRLKDILHGSEYVLTYEDKDGDWMLVGDVPWDMFTNSCRRLRIMKGSEAIGL 337

Query: 336  APRAMEKCKNRN 301
            APRAMEKCKNRN
Sbjct: 338  APRAMEKCKNRN 349