BLASTX nr result

ID: Cimicifuga21_contig00004216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004216
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15681.3| unnamed protein product [Vitis vinifera]              248   1e-63
gb|ABV23568.1| MADS-box protein [Populus deltoides]                   244   1e-62
ref|XP_002283916.1| PREDICTED: MADS-box transcription factor 6-l...   243   3e-62
ref|XP_002321711.1| MIKC mads-box transcription factor [Populus ...   243   3e-62
ref|XP_004145150.1| PREDICTED: MADS-box transcription factor 6-l...   234   2e-59

>emb|CBI15681.3| unnamed protein product [Vitis vinifera]
          Length = 235

 Score =  248 bits (632), Expect = 1e-63
 Identities = 124/179 (69%), Positives = 157/179 (87%), Gaps = 2/179 (1%)
 Frame = -3

Query: 587 MGRGKVELKRIENTTSRQVTFSKRRNGLLKKAFELSVLCDAEVALLIFSPTGKTFQFSSQ 408
           MGRGKVELKRIEN+TSRQVTFSKR+NGLLKKAFELS+LCDAEVALLIFSP+GK +QF+S 
Sbjct: 1   MGRGKVELKRIENSTSRQVTFSKRKNGLLKKAFELSILCDAEVALLIFSPSGKAYQFASH 60

Query: 407 DMDRTIARYRSESGLPQLYHDERSRSTELWKTEIEDLKKTADKMEARNKHFAGEDLLSLD 228
           DMDR+IARYR+E GL +  + +RSR+ E W +EI++L++T D +EA++KH AGEDL +L 
Sbjct: 61  DMDRSIARYRNEVGLMEFNNYQRSRTIEFWMSEIDNLRRTIDTLEAKHKHLAGEDLSTLG 120

Query: 227 VKDLKQLERQLKTGVERIRSRKRRILSEHISLLKRKQKALQVENTCLQN--RLHVADLH 57
           +K+LKQLERQLK GVERIR++KRRI+SEHISLLK++Q+ALQ +NT LQ   +LH A+L+
Sbjct: 121 MKELKQLERQLKNGVERIRAKKRRIISEHISLLKKRQRALQEDNTRLQKKVKLHEANLN 179


>gb|ABV23568.1| MADS-box protein [Populus deltoides]
          Length = 203

 Score =  244 bits (623), Expect = 1e-62
 Identities = 121/172 (70%), Positives = 150/172 (87%)
 Frame = -3

Query: 587 MGRGKVELKRIENTTSRQVTFSKRRNGLLKKAFELSVLCDAEVALLIFSPTGKTFQFSSQ 408
           MGRGKVELKRIEN+ SRQVTFSKRRNGLLKKAFELS+LC+AEV+L+IFSP+GK +QFSS 
Sbjct: 1   MGRGKVELKRIENSASRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPSGKFYQFSSH 60

Query: 407 DMDRTIARYRSESGLPQLYHDERSRSTELWKTEIEDLKKTADKMEARNKHFAGEDLLSLD 228
           DM+R++ARYRSE GLP   +D+RSRS E W++EIE+L++T +K EA+ +HF GED+  L 
Sbjct: 61  DMERSVARYRSEVGLPGT-NDQRSRSLEFWRSEIEELRRTINKTEAQLRHFIGEDIAPLG 119

Query: 227 VKDLKQLERQLKTGVERIRSRKRRILSEHISLLKRKQKALQVENTCLQNRLH 72
           +K+LKQLERQLKTGVERIRS+K+R++SEHI LLK +Q+ALQ EN  LQ RLH
Sbjct: 120 LKELKQLERQLKTGVERIRSKKKRVISEHIKLLKSEQRALQEENARLQKRLH 171


>ref|XP_002283916.1| PREDICTED: MADS-box transcription factor 6-like [Vitis vinifera]
          Length = 194

 Score =  243 bits (620), Expect = 3e-62
 Identities = 124/180 (68%), Positives = 157/180 (87%), Gaps = 3/180 (1%)
 Frame = -3

Query: 587 MGRGKVELKRIENTTSRQVTFSKRRNGLLKKAFELSVLCDAEVALLIFSPTGKTFQFSSQ 408
           MGRGKVELKRIEN+TSRQVTFSKR+NGLLKKAFELS+LCDAEVALLIFSP+GK +QF+S 
Sbjct: 1   MGRGKVELKRIENSTSRQVTFSKRKNGLLKKAFELSILCDAEVALLIFSPSGKAYQFASH 60

Query: 407 DMDRTIARYRSESGLPQLYHDERSRSTE-LWKTEIEDLKKTADKMEARNKHFAGEDLLSL 231
           DMDR+IARYR+E GL +  + +RSR+ E  W +EI++L++T D +EA++KH AGEDL +L
Sbjct: 61  DMDRSIARYRNEVGLMEFNNYQRSRTIEQFWMSEIDNLRRTIDTLEAKHKHLAGEDLSTL 120

Query: 230 DVKDLKQLERQLKTGVERIRSRKRRILSEHISLLKRKQKALQVENTCLQN--RLHVADLH 57
            +K+LKQLERQLK GVERIR++KRRI+SEHISLLK++Q+ALQ +NT LQ   +LH A+L+
Sbjct: 121 GMKELKQLERQLKNGVERIRAKKRRIISEHISLLKKRQRALQEDNTRLQKKVKLHEANLN 180


>ref|XP_002321711.1| MIKC mads-box transcription factor [Populus trichocarpa]
           gi|118482604|gb|ABK93222.1| unknown [Populus
           trichocarpa] gi|222868707|gb|EEF05838.1| MIKC mads-box
           transcription factor [Populus trichocarpa]
          Length = 203

 Score =  243 bits (619), Expect = 3e-62
 Identities = 121/172 (70%), Positives = 148/172 (86%)
 Frame = -3

Query: 587 MGRGKVELKRIENTTSRQVTFSKRRNGLLKKAFELSVLCDAEVALLIFSPTGKTFQFSSQ 408
           MGRGKVELKRIEN+ SRQVTFSKRRNGLLKKAFELS+LC+AEV+L+IFSP+GK +QFSS 
Sbjct: 1   MGRGKVELKRIENSASRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPSGKFYQFSSH 60

Query: 407 DMDRTIARYRSESGLPQLYHDERSRSTELWKTEIEDLKKTADKMEARNKHFAGEDLLSLD 228
           DM+R++ARYRSE GLP   +D+RSRS E W+ EIE+L++T  K EA+ +HF GED+  L 
Sbjct: 61  DMERSVARYRSEVGLPGT-NDQRSRSLEFWRCEIEELRRTITKTEAQLRHFIGEDIAPLG 119

Query: 227 VKDLKQLERQLKTGVERIRSRKRRILSEHISLLKRKQKALQVENTCLQNRLH 72
           +K+LKQLERQLKTGVERIRS+K+R++SEHI LLK +Q+ALQ EN  LQ RLH
Sbjct: 120 LKELKQLERQLKTGVERIRSKKKRVISEHIKLLKSEQRALQEENARLQKRLH 171


>ref|XP_004145150.1| PREDICTED: MADS-box transcription factor 6-like [Cucumis sativus]
           gi|449474274|ref|XP_004154125.1| PREDICTED: MADS-box
           transcription factor 6-like [Cucumis sativus]
           gi|12597207|dbj|BAB21509.1| putative MADS-box protein
           [Cucumis sativus]
          Length = 203

 Score =  234 bits (596), Expect = 2e-59
 Identities = 120/172 (69%), Positives = 145/172 (84%)
 Frame = -3

Query: 587 MGRGKVELKRIENTTSRQVTFSKRRNGLLKKAFELSVLCDAEVALLIFSPTGKTFQFSSQ 408
           MGRGKVELKRIEN TSRQVTFSKRRNGLLKKA+ELSVLCDA+VALLIFSP+GK +QFSS 
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAQVALLIFSPSGKAYQFSSH 60

Query: 407 DMDRTIARYRSESGLPQLYHDERSRSTELWKTEIEDLKKTADKMEARNKHFAGEDLLSLD 228
           DMD T+ARYR++ GLPQ  H   SR+   WKTE++D+K++   MEAR +HF GEDL  L+
Sbjct: 61  DMDGTLARYRTDVGLPQSNH-PHSRAL-FWKTEMDDMKRSISSMEARLRHFVGEDLEPLN 118

Query: 227 VKDLKQLERQLKTGVERIRSRKRRILSEHISLLKRKQKALQVENTCLQNRLH 72
           VK+LKQLERQ+  G+ERIRS+KRRI++EHI+LLKRK K LQ E++ LQ RL+
Sbjct: 119 VKELKQLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKRLN 170


Top