BLASTX nr result

ID: Cimicifuga21_contig00004206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004206
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327641.1| predicted protein [Populus trichocarpa] gi|2...   241   1e-61
ref|XP_002531137.1| conserved hypothetical protein [Ricinus comm...   233   5e-59
ref|XP_002277779.1| PREDICTED: uncharacterized protein LOC100248...   232   1e-58
ref|XP_003547914.1| PREDICTED: uncharacterized protein LOC100785...   229   6e-58
gb|ACU23328.1| unknown [Glycine max]                                  225   1e-56

>ref|XP_002327641.1| predicted protein [Populus trichocarpa] gi|222836726|gb|EEE75119.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  241 bits (616), Expect = 1e-61
 Identities = 134/214 (62%), Positives = 151/214 (70%), Gaps = 7/214 (3%)
 Frame = +2

Query: 98  MAFVHYMAAAPSTALNPSHRTPIXXXXXXXXXXXXXXXXXXXXXXXIWI-------KARK 256
           MAF HY+ A P+    PS+ T                         + +       KARK
Sbjct: 1   MAFAHYLVAVPT---EPSNLTKAALFSTSPPPPPPPPLSFNKNHSDLTLSSTSLKTKARK 57

Query: 257 LSLLSKTFSRFGHKARAKLPESEAVSAADAFTQFKHVLLPITDKNPYLAEGTRQAAATVA 436
           LS+  K F R G K +AK  ESE   AA+AFT FKH+LLPITD NPYL+EGTRQAAAT A
Sbjct: 58  LSIFPK-FRRTGQKGKAKAKESEVSLAAEAFTNFKHLLLPITDTNPYLSEGTRQAAATAA 116

Query: 437 GLAKKYEADITVVVIDEDPKESAPEHDKKLSSIRWHLSEGGFQEFRLIERLGEGKKPTAI 616
            LAKKY ADITVVVIDE  KES PEH+ ++SSIRWHL+EGGFQEF+L+ERLGEG KPTAI
Sbjct: 117 ALAKKYGADITVVVIDERQKESLPEHETQMSSIRWHLAEGGFQEFKLLERLGEGSKPTAI 176

Query: 617 IGEVADDLNLDLVVISMEAIHSKHVDANLLAEFI 718
           IGEVADDL+LDLVVISMEAIHSKHVDANLLAEFI
Sbjct: 177 IGEVADDLSLDLVVISMEAIHSKHVDANLLAEFI 210


>ref|XP_002531137.1| conserved hypothetical protein [Ricinus communis]
           gi|223529250|gb|EEF31222.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 212

 Score =  233 bits (594), Expect = 5e-59
 Identities = 116/143 (81%), Positives = 126/143 (88%)
 Frame = +2

Query: 290 GHKARAKLPESEAVSAADAFTQFKHVLLPITDKNPYLAEGTRQAAATVAGLAKKYEADIT 469
           GHK +AK  ESE   AAD FT FKH+LLPITD+NPYL+EGTRQAAAT A LAKKY ADIT
Sbjct: 61  GHKVKAKAQESEVNVAADTFTHFKHLLLPITDRNPYLSEGTRQAAATTAALAKKYGADIT 120

Query: 470 VVVIDEDPKESAPEHDKKLSSIRWHLSEGGFQEFRLIERLGEGKKPTAIIGEVADDLNLD 649
           VVVID   KES PEH+ ++SSIRWHLSEGGFQEF+L+ERLGEG KPTAIIGEVADDLNLD
Sbjct: 121 VVVIDAKQKESLPEHEAQMSSIRWHLSEGGFQEFKLLERLGEGNKPTAIIGEVADDLNLD 180

Query: 650 LVVISMEAIHSKHVDANLLAEFI 718
           LVV+SMEAIHSKHVDANLLAEFI
Sbjct: 181 LVVLSMEAIHSKHVDANLLAEFI 203


>ref|XP_002277779.1| PREDICTED: uncharacterized protein LOC100248935 [Vitis vinifera]
           gi|296084694|emb|CBI25836.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score =  232 bits (591), Expect = 1e-58
 Identities = 120/159 (75%), Positives = 135/159 (84%), Gaps = 1/159 (0%)
 Frame = +2

Query: 245 KARKLSLLSKTFSRFGHKARAKLPESEAVSAADAFTQFKHVLLPITDKNPYLAEGTRQAA 424
           K  KLS+      + GH+A++K  +SE   AA+AFT FKH+LLP+TD+NPYL+EGTRQAA
Sbjct: 45  KTSKLSIFPGLL-KLGHRAKSKPQDSEVNLAAEAFTSFKHLLLPVTDRNPYLSEGTRQAA 103

Query: 425 ATVAGLAKKYEADITVVVIDEDPKESAPEHDKKLSSIRWHLSEGGFQEFRLIERLGEG-K 601
           AT A LAKKY ADITVVVIDE  KES PEHD +LSSIRWHLSEGGFQEFR++ERLGEG  
Sbjct: 104 ATTAALAKKYGADITVVVIDEKQKESIPEHDTQLSSIRWHLSEGGFQEFRVLERLGEGSS 163

Query: 602 KPTAIIGEVADDLNLDLVVISMEAIHSKHVDANLLAEFI 718
           KPTAIIGEVADDLNLDLVV+SMEAIHSKHVDANLLAEFI
Sbjct: 164 KPTAIIGEVADDLNLDLVVLSMEAIHSKHVDANLLAEFI 202


>ref|XP_003547914.1| PREDICTED: uncharacterized protein LOC100785706 [Glycine max]
          Length = 213

 Score =  229 bits (585), Expect = 6e-58
 Identities = 122/207 (58%), Positives = 141/207 (68%)
 Frame = +2

Query: 98  MAFVHYMAAAPSTALNPSHRTPIXXXXXXXXXXXXXXXXXXXXXXXIWIKARKLSLLSKT 277
           MAF HY+ A P   + PS   P                        +    R    L   
Sbjct: 1   MAFAHYLLAVP---VEPSPNFPTNPPKPNPSLSSSSSSSISSHCFNLSSSLRPKHSLFSR 57

Query: 278 FSRFGHKARAKLPESEAVSAADAFTQFKHVLLPITDKNPYLAEGTRQAAATVAGLAKKYE 457
           F R  HKA+AK  E E   A+DAFTQFKH+LLPITD+NPYL+EGTRQA AT + LAKKY 
Sbjct: 58  FRRICHKAKAKPQEPEVTVASDAFTQFKHLLLPITDRNPYLSEGTRQAIATTSALAKKYG 117

Query: 458 ADITVVVIDEDPKESAPEHDKKLSSIRWHLSEGGFQEFRLIERLGEGKKPTAIIGEVADD 637
           ADITVVVID   KES PEH+ +LSSIRWHLSEGG +++ L+ERLG+G KPTAIIG+VADD
Sbjct: 118 ADITVVVIDAQQKESLPEHETQLSSIRWHLSEGGLKDYNLLERLGDGNKPTAIIGDVADD 177

Query: 638 LNLDLVVISMEAIHSKHVDANLLAEFI 718
           LNLDLVVISMEAIH+KH+DANLLAEFI
Sbjct: 178 LNLDLVVISMEAIHTKHIDANLLAEFI 204


>gb|ACU23328.1| unknown [Glycine max]
          Length = 213

 Score =  225 bits (574), Expect = 1e-56
 Identities = 120/207 (57%), Positives = 139/207 (67%)
 Frame = +2

Query: 98  MAFVHYMAAAPSTALNPSHRTPIXXXXXXXXXXXXXXXXXXXXXXXIWIKARKLSLLSKT 277
           MAF HY+ A P   + PS   P                        +    R    L   
Sbjct: 1   MAFAHYLLAVP---VEPSPNFPTNPPKPNPSLSSSSSSSISSHCFNLSSSLRPKHSLFSR 57

Query: 278 FSRFGHKARAKLPESEAVSAADAFTQFKHVLLPITDKNPYLAEGTRQAAATVAGLAKKYE 457
           F R  HKA+ K  E E   A+DAFTQFKH+LLPITD+NPY +EGTRQA AT + LAKKY 
Sbjct: 58  FRRICHKAKVKPQEPEVTVASDAFTQFKHLLLPITDRNPYPSEGTRQAIATTSALAKKYG 117

Query: 458 ADITVVVIDEDPKESAPEHDKKLSSIRWHLSEGGFQEFRLIERLGEGKKPTAIIGEVADD 637
           ADITVVVID   KES PEH+ +LSSIRWHLSEGG +++ L+ERLG+G KPTAIIG+VADD
Sbjct: 118 ADITVVVIDAQQKESLPEHETQLSSIRWHLSEGGLKDYNLLERLGDGNKPTAIIGDVADD 177

Query: 638 LNLDLVVISMEAIHSKHVDANLLAEFI 718
           LNLDLVVISMEAIH+KH+DANLLAEFI
Sbjct: 178 LNLDLVVISMEAIHTKHIDANLLAEFI 204


Top