BLASTX nr result

ID: Cimicifuga21_contig00004204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004204
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265574.1| PREDICTED: cell division topological specifi...   316   7e-84
emb|CAN67389.1| hypothetical protein VITISV_034714 [Vitis vinifera]   298   2e-78
ref|XP_002278852.2| PREDICTED: cell division topological specifi...   296   8e-78
ref|XP_002512131.1| conserved hypothetical protein [Ricinus comm...   288   1e-75
gb|AFC37489.1| MinE protein [Manihot esculenta]                       285   2e-74

>ref|XP_002265574.1| PREDICTED: cell division topological specificity factor homolog,
           chloroplastic [Vitis vinifera]
           gi|296088282|emb|CBI36508.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  316 bits (809), Expect = 7e-84
 Identities = 159/228 (69%), Positives = 189/228 (82%)
 Frame = -2

Query: 933 MAISGDLRVSATLASYPTHSLRRSLPPSRVGFNSSLTGRSSLTEIMPKWPRIELEGHSTQ 754
           MA+SGDLRV ATL+SYPTH LR SL  S+VGF  +L G SS+ +I P+WP + L GH   
Sbjct: 1   MAVSGDLRVVATLSSYPTHPLRSSLLSSKVGFAGALNGESSIPDITPRWPSLVLNGHPVH 60

Query: 753 CHSDRSWSFGIVGDNQISSEPVNEETEGFLLNAINMSFFERLDLAWKILFPPPATRRSSN 574
           CHS R   FGI+GDN++S   +++E E  LLNAINM+F ERL+LAWKI+FPP  TR S N
Sbjct: 61  CHSKRI--FGIMGDNKLSPRSISQEAESLLLNAINMNFLERLNLAWKIIFPPQKTRHS-N 117

Query: 573 ARIAKQRLKMILFSDRCAVSDDAKQKIVSNIVGALSDFVEIESRDKVQLNVSTDPDLGTV 394
           ARIAKQRL+MILFSDRCAVSD+AKQKIV+NIV ALSDFVEIES+DKVQL+VSTDP+LGTV
Sbjct: 118 ARIAKQRLQMILFSDRCAVSDEAKQKIVNNIVHALSDFVEIESQDKVQLSVSTDPNLGTV 177

Query: 393 YSVTVPVRRVKSEYQDEEEFGMISNVEYKDNGESSGSVDVKFDFFVPN 250
           YSVTVPVRRVK EYQ  +E G I+N+EYKDNG+SSGSVDV+FDF +P+
Sbjct: 178 YSVTVPVRRVKPEYQAVDEMGTIANIEYKDNGDSSGSVDVRFDFVIPS 225


>emb|CAN67389.1| hypothetical protein VITISV_034714 [Vitis vinifera]
          Length = 530

 Score =  298 bits (762), Expect = 2e-78
 Identities = 156/238 (65%), Positives = 184/238 (77%), Gaps = 15/238 (6%)
 Frame = -2

Query: 933 MAISGDLRVSATLASYPTHSLRRSLPPSR---------------VGFNSSLTGRSSLTEI 799
           MA+SGDLRV ATL+SYPTH LR SL  S+               VGF  +L G SS+ +I
Sbjct: 1   MAVSGDLRVVATLSSYPTHPLRSSLLSSKAKSDKRIIEVDWLVKVGFAGALNGESSIPDI 60

Query: 798 MPKWPRIELEGHSTQCHSDRSWSFGIVGDNQISSEPVNEETEGFLLNAINMSFFERLDLA 619
            P+WP + L GH   CHS R   FGI+GDN++S   +++E E  LLNAINM+F ERL+LA
Sbjct: 61  TPRWPSLVLNGHPVHCHSKRI--FGIMGDNKLSPRSISQEAESLLLNAINMNFLERLNLA 118

Query: 618 WKILFPPPATRRSSNARIAKQRLKMILFSDRCAVSDDAKQKIVSNIVGALSDFVEIESRD 439
           WKI+FPP  TR S NARIAKQRL+MILFSDRCAVSD+AKQKIV+NIV ALSDFVEIES+D
Sbjct: 119 WKIIFPPQKTRHS-NARIAKQRLQMILFSDRCAVSDEAKQKIVNNIVHALSDFVEIESQD 177

Query: 438 KVQLNVSTDPDLGTVYSVTVPVRRVKSEYQDEEEFGMISNVEYKDNGESSGSVDVKFD 265
           KVQL+VSTDP+LGTVYSVTVPVRRVK EYQ  +E G I+N+EYKDNG+SSGSVDV+ D
Sbjct: 178 KVQLSVSTDPNLGTVYSVTVPVRRVKPEYQAADEMGTIANIEYKDNGDSSGSVDVRLD 235


>ref|XP_002278852.2| PREDICTED: cell division topological specificity factor homolog,
           chloroplastic-like [Vitis vinifera]
           gi|296082964|emb|CBI22265.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  296 bits (757), Expect = 8e-78
 Identities = 154/235 (65%), Positives = 182/235 (77%), Gaps = 3/235 (1%)
 Frame = -2

Query: 933 MAISGDLRVSATLASYP-THSLRRSLPPSRVGFNSSLTGRSSLTEIMPKWPRIELEGHST 757
           MAI GDLRVSA    +   H    SLPPS+V F     G S  +EIMPKW  +E+E + T
Sbjct: 1   MAICGDLRVSAAPMGFRFKHPFGASLPPSKVRFKHFTNGGSDSSEIMPKWSCMEMERYKT 60

Query: 756 QCHSDRSWSFGIVGDNQISSEPVNEETEGFLLNAINMSFFERLDLAWKILFPPPATRRSS 577
            CH ++   FG+ G N++  EP+ ++ EGFL    +MSFFERL+LAWKILFP P TRR+S
Sbjct: 61  WCHYNQP--FGVTGANRLPMEPITQDAEGFLHKMTSMSFFERLNLAWKILFPSPTTRRNS 118

Query: 576 NARIAKQRLKMILFSDRCAVSDDAKQKIVSNIVGALSDFVEIESRDKVQLNVSTDPDLGT 397
           NARIAKQRLKMILFSDRC VSDDAKQKIVSNIVGALS+FVEI+S+DKV LNVSTDPDLGT
Sbjct: 119 NARIAKQRLKMILFSDRCVVSDDAKQKIVSNIVGALSEFVEIDSQDKVHLNVSTDPDLGT 178

Query: 396 VYSVTVPVRRVKSEYQ--DEEEFGMISNVEYKDNGESSGSVDVKFDFFVPNKKMQ 238
           VYS+TVPVRRVKS+YQ  DE+E  +I+N+EYKD GE S SVDV+FDFFVPN+  Q
Sbjct: 179 VYSITVPVRRVKSKYQDEDEDEDRIITNIEYKDTGERSDSVDVRFDFFVPNENSQ 233


>ref|XP_002512131.1| conserved hypothetical protein [Ricinus communis]
           gi|223549311|gb|EEF50800.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 232

 Score =  288 bits (738), Expect = 1e-75
 Identities = 154/232 (66%), Positives = 179/232 (77%), Gaps = 2/232 (0%)
 Frame = -2

Query: 933 MAISGDLRVSATLASYPTHSLRRSLPPS--RVGFNSSLTGRSSLTEIMPKWPRIELEGHS 760
           MAISGDLRVSATL SY  H  R S P S  +V F     G S  +  + KWP I ++   
Sbjct: 1   MAISGDLRVSATLTSYHKHPFRSSFPSSNSKVEFTGFPGGGSVTSPNVHKWPSIMVDRCK 60

Query: 759 TQCHSDRSWSFGIVGDNQISSEPVNEETEGFLLNAINMSFFERLDLAWKILFPPPATRRS 580
              HS R    GI GD Q+SS  + EE E FLLNAINMSFFERL+LAWKI+FP PA R+S
Sbjct: 61  MHDHSRRF--SGITGDYQLSSTSIGEEAESFLLNAINMSFFERLNLAWKIIFPSPARRKS 118

Query: 579 SNARIAKQRLKMILFSDRCAVSDDAKQKIVSNIVGALSDFVEIESRDKVQLNVSTDPDLG 400
           SNAR+AKQRLKMILFSDRCAVSD+AK+KIVSNIV ALS+FV IES+DKVQL+V+ D DLG
Sbjct: 119 SNARVAKQRLKMILFSDRCAVSDEAKRKIVSNIVHALSEFVVIESQDKVQLSVTADSDLG 178

Query: 399 TVYSVTVPVRRVKSEYQDEEEFGMISNVEYKDNGESSGSVDVKFDFFVPNKK 244
           TVYSVTVPVRRV+ EYQD EE G I+N+EYKD GESSGSVDV+FDFF+P+++
Sbjct: 179 TVYSVTVPVRRVRPEYQDAEEIGSITNIEYKDTGESSGSVDVRFDFFIPDER 230


>gb|AFC37489.1| MinE protein [Manihot esculenta]
          Length = 232

 Score =  285 bits (728), Expect = 2e-74
 Identities = 154/235 (65%), Positives = 181/235 (77%), Gaps = 5/235 (2%)
 Frame = -2

Query: 933 MAISGDLRVSATLASYPTHSLRRSLPPSR-----VGFNSSLTGRSSLTEIMPKWPRIELE 769
           MAISGDLRVSATLASY  H LR SLP S      +GF    +G S       KWP I L+
Sbjct: 1   MAISGDLRVSATLASYHKHPLRSSLPTSNSKVEFIGFPGRGSGASPNRH---KWPGIMLD 57

Query: 768 GHSTQCHSDRSWSFGIVGDNQISSEPVNEETEGFLLNAINMSFFERLDLAWKILFPPPAT 589
            +  Q HS R    GI GD Q+SS  + ++ E FLLNAINMSF ERL+LAWKI+FP PA 
Sbjct: 58  RYKMQDHSRRF--SGISGDYQLSSTSIRDDAESFLLNAINMSFPERLNLAWKIIFPSPAR 115

Query: 588 RRSSNARIAKQRLKMILFSDRCAVSDDAKQKIVSNIVGALSDFVEIESRDKVQLNVSTDP 409
           R+SSNARIAKQRLKMILFSDRCAVSD+AKQKIV N+V ALS+FVEI+S DKVQL+V+ D 
Sbjct: 116 RKSSNARIAKQRLKMILFSDRCAVSDEAKQKIVRNVVHALSEFVEIDSEDKVQLSVTADL 175

Query: 408 DLGTVYSVTVPVRRVKSEYQDEEEFGMISNVEYKDNGESSGSVDVKFDFFVPNKK 244
           DLGTVYSVTVPVRRV+ EYQD EE G I+N+EYKD G++SGSVDV+FDFF+P+++
Sbjct: 176 DLGTVYSVTVPVRRVRPEYQDAEETGSITNIEYKDTGDTSGSVDVRFDFFIPDER 230


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