BLASTX nr result

ID: Cimicifuga21_contig00004200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004200
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310637.1| predicted protein [Populus trichocarpa] gi|2...    80   7e-13
ref|XP_002307152.1| predicted protein [Populus trichocarpa] gi|2...    77   4e-12
ref|XP_002273898.1| PREDICTED: myosin-J heavy chain-like [Vitis ...    70   7e-10
emb|CBI35399.3| unnamed protein product [Vitis vinifera]               65   3e-08
ref|XP_003536741.1| PREDICTED: myosin-J heavy chain-like [Glycin...    59   2e-06

>ref|XP_002310637.1| predicted protein [Populus trichocarpa] gi|222853540|gb|EEE91087.1|
           predicted protein [Populus trichocarpa]
          Length = 1174

 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 48/123 (39%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
 Frame = +1

Query: 577 PSLSSMRSLPVDFRSIGPPTSMGDRDXXXXXXXXXXXXXXXXXXXN-------------- 714
           PSL S++SLPVDFR +G PTS                        N              
Sbjct: 9   PSLESIKSLPVDFRFVGSPTSEQLEKSVDVKSLNSNAVCLSFPEKNDIGNGLVEGAEDSV 68

Query: 715 -MDLVNDDPYSKKDLVVEERPSESDEYSDAATPPLPALSSSRTESRWSDTSYYAAKKKKL 891
             D+  D PYS+  +++E+RPS  DE  D    PLP++S+SR E RWSDTS YA   KKL
Sbjct: 69  GNDVSEDSPYSRTAILIEQRPSVGDEDLDTVVMPLPSISTSRRERRWSDTSSYAT-NKKL 127

Query: 892 QAW 900
           Q+W
Sbjct: 128 QSW 130


>ref|XP_002307152.1| predicted protein [Populus trichocarpa] gi|222856601|gb|EEE94148.1|
           predicted protein [Populus trichocarpa]
          Length = 1173

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 47/120 (39%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
 Frame = +1

Query: 577 PSLSSMRSLPVDFRSIGPPTSMGDRDXXXXXXXXXXXXXXXXXXXNMDLVN--------- 729
           PS  S++SLPVDFR +G PTS    +                      LV          
Sbjct: 10  PSFQSIKSLPVDFRFVGSPTSEQSENANLVNSNTACLSVPEKNDLENGLVEGAEDSVGND 69

Query: 730 ---DDPYSKKDLVVEERPSESDEYSDAATPPLPALSSSRTESRWSDTSYYAAKKKKLQAW 900
              D PYS+  ++VE+RPS  DE  D    PLP +S+   E RW+DTS YAA KKKLQ+W
Sbjct: 70  VNEDSPYSQAAILVEQRPSVGDEDLDTVPTPLPLVSTFHRERRWADTSSYAA-KKKLQSW 128


>ref|XP_002273898.1| PREDICTED: myosin-J heavy chain-like [Vitis vinifera]
          Length = 1197

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 46/125 (36%), Positives = 61/125 (48%), Gaps = 17/125 (13%)
 Frame = +1

Query: 577 PSLSSMRSLPVDFRSIGPPTS----------------MGDRDXXXXXXXXXXXXXXXXXX 708
           PSL S++SLPV FR  G PTS                + D                    
Sbjct: 30  PSLQSIKSLPVGFRFTGSPTSGVSGQSDDVNTENSDVICDSIPENGDLSGEVVGAIEDGA 89

Query: 709 XNMDLVNDD-PYSKKDLVVEERPSESDEYSDAATPPLPALSSSRTESRWSDTSYYAAKKK 885
             MD  +DD PY +K + ++ERPS  DE      P L +++ SR+E RW+DT+ YAA KK
Sbjct: 90  GEMDQASDDTPYDRKTIAIDERPSVGDEDLGFVAPHLRSVAPSRSEFRWADTTSYAA-KK 148

Query: 886 KLQAW 900
           KLQ+W
Sbjct: 149 KLQSW 153


>emb|CBI35399.3| unnamed protein product [Vitis vinifera]
          Length = 1135

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
 Frame = +1

Query: 577 PSLSSMRSLPVDFRSIGPPTSMGDRDXXXXXXXXXXXXXXXXXXXNMDLVNDD-PYSKKD 753
           PSL S++SLPV FR                                MD  +DD PY +K 
Sbjct: 13  PSLQSIKSLPVGFR-----------------------------FTEMDQASDDTPYDRKT 43

Query: 754 LVVEERPSESDEYSDAATPPLPALSSSRTESRWSDTSYYAAKKKKLQAW 900
           + ++ERPS  DE      P L +++ SR+E RW+DT+ YAA KKKLQ+W
Sbjct: 44  IAIDERPSVGDEDLGFVAPHLRSVAPSRSEFRWADTTSYAA-KKKLQSW 91


>ref|XP_003536741.1| PREDICTED: myosin-J heavy chain-like [Glycine max]
          Length = 1106

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
 Frame = +1

Query: 715 MDLVNDD-PYSKKDLVVEERPSESDEYS-DAATPPLPALSSSRTESRWSDTSYYAAKKKK 888
           MDL ++D PY  K   +++RPS +DE S   + PPLP L+SSR ESRW+DT+ Y + KKK
Sbjct: 1   MDLSDEDSPYGAKGRSLKDRPSNADEDSVSVSLPPLPLLTSSR-ESRWNDTNPYGS-KKK 58

Query: 889 LQAW 900
           LQ+W
Sbjct: 59  LQSW 62


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