BLASTX nr result
ID: Cimicifuga21_contig00004187
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00004187
(1794 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520518.1| protein with unknown function [Ricinus commu... 349 2e-93
ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241... 321 5e-85
ref|XP_002298340.1| predicted protein [Populus trichocarpa] gi|2... 320 8e-85
ref|XP_003543528.1| PREDICTED: transcription initiation factor I... 311 3e-82
ref|XP_003543527.1| PREDICTED: transcription initiation factor I... 309 2e-81
>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
gi|223540360|gb|EEF41931.1| protein with unknown function
[Ricinus communis]
Length = 383
Score = 349 bits (895), Expect = 2e-93
Identities = 204/408 (50%), Positives = 235/408 (57%), Gaps = 45/408 (11%)
Frame = -3
Query: 1552 STNTTSAVYINVIEDVVNKVRDEFLHSGVDETVLNELQGMWEMKMMQCGVICGPIERXXX 1373
++ TTS VYI+VIEDVVNKVRDEF+++G ETVLNELQ +WE+KMMQ GVICGPIER
Sbjct: 4 TSTTTSTVYIHVIEDVVNKVRDEFINNGPGETVLNELQAIWELKMMQAGVICGPIERSSG 63
Query: 1372 XXXXXXXXXXXXXXPVHDLNVXXXXXXXXXXXTAEMLFXXXXXXXXXXXXXPGTVQTPLP 1193
VHDLNV TAE+LF TPLP
Sbjct: 64 AKTVPGGVITP----VHDLNVPYEGTEEYETPTAEILFPP----------------TPLP 103
Query: 1192 GNVQTPLPGNVQTPGTAEHSMYIIP--PPSDYSSGHDTAGTVGVNDVKPGRPSPYMQAPS 1019
G QTPLPG+V SMY IP P S+Y + +G G + K GRPSPYMQ PS
Sbjct: 104 GTAQTPLPGSVDNS-----SMYNIPTGPTSEYPTPVSDSG--GSTEAKAGRPSPYMQPPS 156
Query: 1018 PWMNQRPLGVDVNVAYVEGRDDIDRGNPHQPMTQDFFTMSAGKRKREDFAHFHGGGGYIP 839
PW+NQRP +DVN+AYVEGR++ DRG +QP+TQDFFT ++GKRKREDFA + GG+IP
Sbjct: 157 PWINQRP-PLDVNIAYVEGREEADRGTSNQPLTQDFFTGASGKRKREDFAAQYNNGGFIP 215
Query: 838 QQDGAGDATFEVFQ-----------------------------------------PELYP 782
QQDGAGD FEV Q P +Y
Sbjct: 216 QQDGAGDTPFEVLQVERDTVISADIEILSSVTRRGLKIPQLDGPIPDPYDDVLSTPNIYN 275
Query: 781 YQGVASEDYNAVNTPATHDLHAGTPNIVAQNEA--XXXXXXXXXXXXXXXXXXXXXXXXX 608
YQGVA+EDYN NTPA +DL A TP I+ QN+
Sbjct: 276 YQGVANEDYNIANTPAPNDLQASTPAIIPQNDVVDDDDDEPLNEDDDDDDDLDDVDQGED 335
Query: 607 PNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKANGEFEF 464
NTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF KA GEF+F
Sbjct: 336 MNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 383
>ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241598 [Vitis vinifera]
gi|297746029|emb|CBI16085.3| unnamed protein product
[Vitis vinifera]
Length = 393
Score = 321 bits (822), Expect = 5e-85
Identities = 195/417 (46%), Positives = 229/417 (54%), Gaps = 55/417 (13%)
Frame = -3
Query: 1549 TNTTSAVYINVIEDVVNKVRDEFLHSG-VDETVLNELQGMWEMKMMQCGVICGPIERXXX 1373
++ TS VY++VIEDV+NKVRDEF+++G E+VL+ELQG+WEMKM+Q GV+ GPIER
Sbjct: 4 SSMTSTVYVSVIEDVINKVRDEFVNNGGPGESVLSELQGIWEMKMVQAGVVTGPIERSTA 63
Query: 1372 XXXXXXXXXXXXXXPVHDLNVXXXXXXXXXXXTAEMLFXXXXXXXXXXXXXPGTVQTPLP 1193
VHDLNV TAE+LF TPL
Sbjct: 64 PKQTSGAPAPTPP--VHDLNVPYEGTEEYETPTAEILFPP----------------TPLQ 105
Query: 1192 GNVQTPLPGNVQTPGTAEHSMYIIPP-PSDYSSGHDTAGTVGVNDVKPGRPSPYMQAPSP 1016
+QTPLPG ++SMY IP P++Y + D G D+K GRP YM PSP
Sbjct: 106 TPIQTPLPG------MGDNSMYNIPTGPTEYPAAQDGGGAT---DMKSGRPPSYMPPPSP 156
Query: 1015 WMNQRP-LGVDVNVAYVEGRDDIDRGNPHQPMTQDFFTMSAGKRKREDFAHFHGGGGYIP 839
WM QRP L VDVNVAYVEGRD+ DRGN QP+TQDFF MS+GKRKREDF + GYIP
Sbjct: 157 WMQQRPPLSVDVNVAYVEGRDEGDRGNSQQPLTQDFFMMSSGKRKREDFPSQYHTSGYIP 216
Query: 838 QQDGAGDATFEVFQ---------------------------------------------- 797
QQDGAGD EVF+
Sbjct: 217 QQDGAGDPAPEVFEVEVSQGSNSIKGHDILTKANREIFPQVAGSYVRIPQLDGPIPDPYE 276
Query: 796 -----PELYPYQGVASEDYNAVNTPATHDLHAGTPNIVAQNE-AXXXXXXXXXXXXXXXX 635
P +Y YQGV +EDYN VNTPA +D+ AGTP + QN+
Sbjct: 277 DVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAGTPAVGIQNDVGDDDDDEPPLNENDDDD 336
Query: 634 XXXXXXXXXPNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKANGEFEF 464
NTQHLVLAQFDKVTRTKS+WKCTLKDGIMHINNKDILF KANGEF+F
Sbjct: 337 LDDVEQGEELNTQHLVLAQFDKVTRTKSKWKCTLKDGIMHINNKDILFNKANGEFDF 393
>ref|XP_002298340.1| predicted protein [Populus trichocarpa] gi|222845598|gb|EEE83145.1|
predicted protein [Populus trichocarpa]
Length = 409
Score = 320 bits (820), Expect = 8e-85
Identities = 202/425 (47%), Positives = 240/425 (56%), Gaps = 61/425 (14%)
Frame = -3
Query: 1555 MSTNTTSAVYINVIEDVVNKVRDEFLHSG-VDETVLNELQGMWEMKMMQCGVICGPIERX 1379
M+++ TS VY VIEDV++KVRDEF+++G ETVL+ELQG+WE K+MQ GV+ GPI R
Sbjct: 1 MASSATSTVYTEVIEDVIDKVRDEFINNGGPGETVLSELQGLWEKKLMQAGVLSGPIVRS 60
Query: 1378 XXXXXXXXXXXXXXXXPVHDLNVXXXXXXXXXXXTAEMLFXXXXXXXXXXXXXPGTVQTP 1199
VHDLNV TAE+LF G+ QTP
Sbjct: 61 SANKQLVPGGLTP----VHDLNVPYEGTEEYETPTAEILFPPTPLP--------GSAQTP 108
Query: 1198 LPGNVQTPLPGNVQTP--GTAEHS-MYIIPP--PSDYSSGHDTAGTVGVNDVKPGRPSPY 1034
LPGNVQTPLPGNV TP G+ ++S MY I SDY + AG G DVK GRPS +
Sbjct: 109 LPGNVQTPLPGNVPTPLPGSVDNSSMYNISTGSSSDYPTPVSDAG--GSTDVKAGRPSHF 166
Query: 1033 MQAPSPWMNQRPLGVDVNV------------AYVEGRDDIDRGNPHQPMTQDFFTMSAGK 890
MQ+PSP M+QRP +DVNV AYVEGRD++DRG HQ +TQDFF MS+GK
Sbjct: 167 MQSPSPLMHQRP-PLDVNVGKVLTNKCCAFVAYVEGRDEVDRGGSHQTLTQDFF-MSSGK 224
Query: 889 RKREDFAHFHGGGGYIPQQDGAGDATFEVFQ----------------------------- 797
RKR DFA + GG+IPQQDGA D+ EV Q
Sbjct: 225 RKRGDFAPKYNNGGFIPQQDGAVDSASEVSQVECDTITTKNREILARVSRSYVKIPQVDG 284
Query: 796 ------------PELYPYQGVASEDYNAVNTPATHDLHAGTPNIVAQNE--AXXXXXXXX 659
P +Y YQGVA+EDYN NTPA +DL A TP +V+QN+
Sbjct: 285 PIPDPYDDMLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQNDDVDDDDDEPLN 344
Query: 658 XXXXXXXXXXXXXXXXXPNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKAN 479
NTQHL+LAQFDKVTRTKSRWKCTLKDG+MHINN+DILF KA
Sbjct: 345 EDDDDDEDLDGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINNRDILFNKAT 404
Query: 478 GEFEF 464
GEFEF
Sbjct: 405 GEFEF 409
>ref|XP_003543528.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoform 2 [Glycine max]
Length = 384
Score = 311 bits (798), Expect = 3e-82
Identities = 197/414 (47%), Positives = 223/414 (53%), Gaps = 50/414 (12%)
Frame = -3
Query: 1555 MSTNTTSAVYINVIEDVVNKVRDEFLHSG-VDETVLNELQGMWEMKMMQCGVICGPIERX 1379
M+ +TTS VYI+VIEDV+ KVRDEF+++G E VL ELQ MWE KMMQ G + GPIER
Sbjct: 1 MAASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERS 60
Query: 1378 XXXXXXXXXXXXXXXXPVHDLNVXXXXXXXXXXXTAEMLFXXXXXXXXXXXXXPGTVQTP 1199
VHDLNV TA+MLF TP
Sbjct: 61 TAAKPTPGGPITP----VHDLNVPYEGTDEYETPTADMLFPP----------------TP 100
Query: 1198 LPGNVQTPLPGNVQTPGTAEHSMYIIPP-PSDY-SSGHDTAGTVGVNDVKPGRPSPYMQA 1025
L +QTPLPG T ++S Y IP PSDY SSG+DT G D K RP+PYMQ+
Sbjct: 101 LQTPIQTPLPG------TGDNSTYNIPTGPSDYPSSGNDTGGNA---DGKGARPAPYMQS 151
Query: 1024 PSPWMNQRPLGVDVNVAYVEGRDDIDRGNPHQPMTQDFFTMSAGKRKREDFAHFHGGGGY 845
PSPWMNQRP +DVNVAYVEGRD+ DRG +QP TQDFFTM +GKRKR D + GGY
Sbjct: 152 PSPWMNQRP-PLDVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLTSQYNAGGY 210
Query: 844 IPQQDGAGDATFEVFQ------------------------------------------PE 791
IPQQDGAGDAT F+ P
Sbjct: 211 IPQQDGAGDATHGDFEIEFLKIAYISKGKMSADLERSTSRIPQLDGPIPYDDDDVLSTPN 270
Query: 790 LYPYQGVASEDYNAVNTPATHDLHAGTPNIVAQNEA-----XXXXXXXXXXXXXXXXXXX 626
+Y Y V SEDYN NTPA ++ A TP ++ QNE
Sbjct: 271 IYNYGEVFSEDYNISNTPAPPEVPASTPALLVQNEVGNDFDDDDDDEPPLNEEDDDDLDD 330
Query: 625 XXXXXXPNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKANGEFEF 464
NT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF KA GEFEF
Sbjct: 331 MEQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFEF 384
>ref|XP_003543527.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoform 1 [Glycine max]
Length = 391
Score = 309 bits (791), Expect = 2e-81
Identities = 197/421 (46%), Positives = 223/421 (52%), Gaps = 57/421 (13%)
Frame = -3
Query: 1555 MSTNTTSAVYINVIEDVVNKVRDEFLHSG-VDETVLNELQGMWEMKMMQCGVICGPIERX 1379
M+ +TTS VYI+VIEDV+ KVRDEF+++G E VL ELQ MWE KMMQ G + GPIER
Sbjct: 1 MAASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERS 60
Query: 1378 XXXXXXXXXXXXXXXXPVHDLNVXXXXXXXXXXXTAEMLFXXXXXXXXXXXXXPGTVQTP 1199
VHDLNV TA+MLF TP
Sbjct: 61 TAAKPTPGGPITP----VHDLNVPYEGTDEYETPTADMLFPP----------------TP 100
Query: 1198 LPGNVQTPLPGNVQTPGTAEHSMYIIPP-PSDY-SSGHDTAGTVGVNDVKPGRPSPYMQA 1025
L +QTPLPG T ++S Y IP PSDY SSG+DT G D K RP+PYMQ+
Sbjct: 101 LQTPIQTPLPG------TGDNSTYNIPTGPSDYPSSGNDTGGNA---DGKGARPAPYMQS 151
Query: 1024 PSPWMNQRPLGVDVNVAYVEGRDDIDRGNPHQPMTQDFFTMSAGKRKREDFAHFHGGGGY 845
PSPWMNQRP +DVNVAYVEGRD+ DRG +QP TQDFFTM +GKRKR D + GGY
Sbjct: 152 PSPWMNQRP-PLDVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLTSQYNAGGY 210
Query: 844 IPQQDGAGDATFEVFQ-------------------------------------------- 797
IPQQDGAGDAT F+
Sbjct: 211 IPQQDGAGDATHGDFEIEVSGRGISINSHHTISKGKMSADLERSTSRIPQLDGPIPYDDD 270
Query: 796 -----PELYPYQGVASEDYNAVNTPATHDLHAGTPNIVAQNEA-----XXXXXXXXXXXX 647
P +Y Y V SEDYN NTPA ++ A TP ++ QNE
Sbjct: 271 DVLSTPNIYNYGEVFSEDYNISNTPAPPEVPASTPALLVQNEVGNDFDDDDDDEPPLNEE 330
Query: 646 XXXXXXXXXXXXXPNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFTKANGEFE 467
NT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF KA GEFE
Sbjct: 331 DDDDLDDMEQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFE 390
Query: 466 F 464
F
Sbjct: 391 F 391