BLASTX nr result

ID: Cimicifuga21_contig00004176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004176
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301250.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
emb|CAA70083.1| 60S ribosomal protein L15 [Nicotiana plumbaginif...    86   4e-15
sp|O82528.1|RL15_PETHY RecName: Full=60S ribosomal protein L15 g...    84   2e-14
ref|XP_003573847.1| PREDICTED: 60S ribosomal protein L15-like [B...    83   2e-14
ref|XP_002510977.1| ribosomal protein L15, putative [Ricinus com...    83   2e-14

>ref|XP_002301250.1| predicted protein [Populus trichocarpa]
           gi|224137010|ref|XP_002327000.1| predicted protein
           [Populus trichocarpa] gi|222835315|gb|EEE73750.1|
           predicted protein [Populus trichocarpa]
           gi|222842976|gb|EEE80523.1| predicted protein [Populus
           trichocarpa]
          Length = 204

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/45 (88%), Positives = 41/45 (91%), Gaps = 4/45 (8%)
 Frame = -1

Query: 124 YKYFEIILVDAA----RNDPRINWICNPVHKHRELRGLTSAGKKY 2
           YKYFE+ILVDAA    RNDPRINWICNPVHKHRELRGLTSAGKKY
Sbjct: 127 YKYFEVILVDAAHNAIRNDPRINWICNPVHKHRELRGLTSAGKKY 171


>emb|CAA70083.1| 60S ribosomal protein L15 [Nicotiana plumbaginifolia]
          Length = 92

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/45 (88%), Positives = 41/45 (91%), Gaps = 4/45 (8%)
 Frame = -1

Query: 124 YKYFEIILVDAA----RNDPRINWICNPVHKHRELRGLTSAGKKY 2
           YKYFE+ILVDAA    RNDPRINWICNPVHKHRELRGLTSAGKKY
Sbjct: 15  YKYFEVILVDAAHAAIRNDPRINWICNPVHKHRELRGLTSAGKKY 59


>sp|O82528.1|RL15_PETHY RecName: Full=60S ribosomal protein L15 gi|3608479|gb|AAD13389.1|
           ribosomal protein L15 [Petunia x hybrida]
          Length = 204

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/45 (86%), Positives = 40/45 (88%), Gaps = 4/45 (8%)
 Frame = -1

Query: 124 YKYFEIILVDAA----RNDPRINWICNPVHKHRELRGLTSAGKKY 2
           YKYFE+ILVD A    RNDPRINWICNPVHKHRELRGLTSAGKKY
Sbjct: 127 YKYFEVILVDQAHAAIRNDPRINWICNPVHKHRELRGLTSAGKKY 171


>ref|XP_003573847.1| PREDICTED: 60S ribosomal protein L15-like [Brachypodium distachyon]
          Length = 204

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/45 (84%), Positives = 40/45 (88%), Gaps = 4/45 (8%)
 Frame = -1

Query: 124 YKYFEIILVDAA----RNDPRINWICNPVHKHRELRGLTSAGKKY 2
           YKYFE+ILVD A    RNDPRINW+CNPVHKHRELRGLTSAGKKY
Sbjct: 127 YKYFEVILVDVAHNAVRNDPRINWLCNPVHKHRELRGLTSAGKKY 171


>ref|XP_002510977.1| ribosomal protein L15, putative [Ricinus communis]
           gi|223550092|gb|EEF51579.1| ribosomal protein L15,
           putative [Ricinus communis]
          Length = 204

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/45 (86%), Positives = 40/45 (88%), Gaps = 4/45 (8%)
 Frame = -1

Query: 124 YKYFEIILVDAA----RNDPRINWICNPVHKHRELRGLTSAGKKY 2
           YKYFE+ILVDAA    RNDPRINWIC PVHKHRELRGLTSAGKKY
Sbjct: 127 YKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKY 171


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