BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004173
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit ...   412   e-113
gb|AFK46238.1| unknown [Medicago truncatula]                          398   e-109
gb|AFK36185.1| unknown [Lotus japonicus]                              392   e-107
ref|XP_003527566.1| PREDICTED: COP9 signalosome complex subunit ...   390   e-106
ref|XP_004139760.1| PREDICTED: COP9 signalosome complex subunit ...   389   e-106

>ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit 6a [Vitis vinifera]
           gi|296090054|emb|CBI39873.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  412 bits (1059), Expect = e-113
 Identities = 208/243 (85%), Positives = 224/243 (92%), Gaps = 4/243 (1%)
 Frame = -3

Query: 719 LTFKLHPLVILNISDHCTRVKSQSQTALVSSNND----ASASTLPPPLRVFGCVIGMQRG 552
           LTFKLHPLVI+NISDH TRVKSQ+Q   +SSN      A+AS  PPP RVFGCVIG+QRG
Sbjct: 9   LTFKLHPLVIVNISDHYTRVKSQTQPPHLSSNGGEGAAAAASPPPPPPRVFGCVIGVQRG 68

Query: 551 RTVEIFNSFELLYDDSTNSLDRAFLEKKQELYKKVFPNFYILGWYSTGSDAQELDMQIHK 372
           RTVEIFNSFELLYD ST+SLDR+FLEKKQELYKKVFPNFYILGWYSTGSDAQE DM IHK
Sbjct: 69  RTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPNFYILGWYSTGSDAQESDMHIHK 128

Query: 371 ALMDINESPVYVLLNPAINHAHKDLPVTIYESELHVIEGIPQLIFVRSSYTIETVEAERI 192
           ALMDINESPVYVLLNP+INHA KDLPVTIYESELHVI+GIPQLIFVR++YTIETVEAERI
Sbjct: 129 ALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIDGIPQLIFVRANYTIETVEAERI 188

Query: 191 SVDHVAHLKPSDGGSAATQLAAHLTGVHSAIKMLNSRIKVLHHYILAMQKGDVPYEHSLA 12
           SVDHVAHLKPSDGGSAATQLAAHLTG+HSAIKMLNSRI+VLHHY+LAMQKGD+P E+SL 
Sbjct: 189 SVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPCENSLL 248

Query: 11  RQV 3
           RQV
Sbjct: 249 RQV 251


>gb|AFK46238.1| unknown [Medicago truncatula]
          Length = 318

 Score =  398 bits (1023), Expect = e-109
 Identities = 203/245 (82%), Positives = 220/245 (89%), Gaps = 6/245 (2%)
 Frame = -3

Query: 719 LTFKLHPLVILNISDHCTRVKSQSQTALVSSNN------DASASTLPPPLRVFGCVIGMQ 558
           LTFKLHPLVI+NISDH TRVKSQ    L   NN      D   S+LPPP RVFGCVIG+Q
Sbjct: 9   LTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNNATNNGGDGVVSSLPPP-RVFGCVIGVQ 67

Query: 557 RGRTVEIFNSFELLYDDSTNSLDRAFLEKKQELYKKVFPNFYILGWYSTGSDAQELDMQI 378
           +GRTVEIFNSFELLYD ST+SLDR FLEKKQELYKKVFP+FYILGWYSTGSDA+E DM I
Sbjct: 68  KGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAEESDMHI 127

Query: 377 HKALMDINESPVYVLLNPAINHAHKDLPVTIYESELHVIEGIPQLIFVRSSYTIETVEAE 198
           HKALMDINESPVYVLLNPAINH+ KDLPV+I+ESELHVI+GIPQLIFVRSSYTIETVEAE
Sbjct: 128 HKALMDINESPVYVLLNPAINHSQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETVEAE 187

Query: 197 RISVDHVAHLKPSDGGSAATQLAAHLTGVHSAIKMLNSRIKVLHHYILAMQKGDVPYEHS 18
           RISVDHVAHLKPSDGGSAATQLAA+LTG+HSAIKML+SRIKVLHHY+LAM+KGDVP E+S
Sbjct: 188 RISVDHVAHLKPSDGGSAATQLAANLTGIHSAIKMLHSRIKVLHHYLLAMEKGDVPCENS 247

Query: 17  LARQV 3
           L RQV
Sbjct: 248 LLRQV 252


>gb|AFK36185.1| unknown [Lotus japonicus]
          Length = 317

 Score =  392 bits (1008), Expect = e-107
 Identities = 199/245 (81%), Positives = 219/245 (89%), Gaps = 6/245 (2%)
 Frame = -3

Query: 719 LTFKLHPLVILNISDHCTRVKSQSQTALVSSNN------DASASTLPPPLRVFGCVIGMQ 558
           LTFKLHPLVI+NISDH TRVKSQ    L   N+      D   S++PP  RV+GCVIG+Q
Sbjct: 9   LTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNSVPSNGADGVVSSVPP--RVYGCVIGVQ 66

Query: 557 RGRTVEIFNSFELLYDDSTNSLDRAFLEKKQELYKKVFPNFYILGWYSTGSDAQELDMQI 378
           +GRTVEIFNSFELLYD ST+SLDR FLEKKQELYKKVFP+FYILGWYSTGSDA+E DM I
Sbjct: 67  KGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAEESDMNI 126

Query: 377 HKALMDINESPVYVLLNPAINHAHKDLPVTIYESELHVIEGIPQLIFVRSSYTIETVEAE 198
           H+ALMDINESPVYVLLNP+INH+ KDLPV+I+ESELHVI+GIPQLIFVRSSYTIETVEAE
Sbjct: 127 HRALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETVEAE 186

Query: 197 RISVDHVAHLKPSDGGSAATQLAAHLTGVHSAIKMLNSRIKVLHHYILAMQKGDVPYEHS 18
           RISVDHVAHLKPSDGGSAATQLAAHLTG+HSAIKML+SRIKVLHHY+LAMQKGDVP E+S
Sbjct: 187 RISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGDVPCENS 246

Query: 17  LARQV 3
           L RQV
Sbjct: 247 LLRQV 251


>ref|XP_003527566.1| PREDICTED: COP9 signalosome complex subunit 6a-like [Glycine max]
          Length = 322

 Score =  390 bits (1001), Expect = e-106
 Identities = 200/248 (80%), Positives = 220/248 (88%), Gaps = 9/248 (3%)
 Frame = -3

Query: 719 LTFKLHPLVILNISDHCTRVKSQSQTA-----LVSSNNDASAS--TLPPPL--RVFGCVI 567
           LTFKLHPLVI+NISDH TRVKSQ           ++NN+A+     + PPL  RV+GCVI
Sbjct: 9   LTFKLHPLVIVNISDHYTRVKSQMNPTHAPPHTTTNNNNANGGDGVVSPPLHPRVYGCVI 68

Query: 566 GMQRGRTVEIFNSFELLYDDSTNSLDRAFLEKKQELYKKVFPNFYILGWYSTGSDAQELD 387
           G+Q+GRTVEIFNSFELLYD ST+SLDR FLEKKQELYKKVFP+FYILGWYSTGSDA+E D
Sbjct: 69  GVQKGRTVEIFNSFELLYDPSTHSLDRTFLEKKQELYKKVFPHFYILGWYSTGSDAEESD 128

Query: 386 MQIHKALMDINESPVYVLLNPAINHAHKDLPVTIYESELHVIEGIPQLIFVRSSYTIETV 207
           M IHKALMDINESPVYVLLNP+INH+ KDLPV+I+ESELHVI+GIPQLIFVRSSYTIETV
Sbjct: 129 MHIHKALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETV 188

Query: 206 EAERISVDHVAHLKPSDGGSAATQLAAHLTGVHSAIKMLNSRIKVLHHYILAMQKGDVPY 27
           EAERISVDHVAHLKPSDGGSAATQLAAHLTG HSAIKML+SRIKVLHHY+LAMQKGDVP 
Sbjct: 189 EAERISVDHVAHLKPSDGGSAATQLAAHLTGTHSAIKMLHSRIKVLHHYLLAMQKGDVPC 248

Query: 26  EHSLARQV 3
           E+SL RQV
Sbjct: 249 ENSLLRQV 256


>ref|XP_004139760.1| PREDICTED: COP9 signalosome complex subunit 6a-like [Cucumis
           sativus] gi|449482625|ref|XP_004156353.1| PREDICTED:
           COP9 signalosome complex subunit 6a-like [Cucumis
           sativus]
          Length = 326

 Score =  389 bits (998), Expect = e-106
 Identities = 201/253 (79%), Positives = 215/253 (84%), Gaps = 14/253 (5%)
 Frame = -3

Query: 719 LTFKLHPLVILNISDHCTRVKSQSQTALVSSN--------NDASA------STLPPPLRV 582
           LTFKLHPLVI+NISDH TRVKSQ     +S +        N A A      ST PP  RV
Sbjct: 8   LTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPSTSPPAPRV 67

Query: 581 FGCVIGMQRGRTVEIFNSFELLYDDSTNSLDRAFLEKKQELYKKVFPNFYILGWYSTGSD 402
           FGCV+G+QRGRTVEIFNSFELLYD  T+SLDR FLEKKQELYKKVFP+FYILGWYSTGSD
Sbjct: 68  FGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILGWYSTGSD 127

Query: 401 AQELDMQIHKALMDINESPVYVLLNPAINHAHKDLPVTIYESELHVIEGIPQLIFVRSSY 222
           A E DM IHKALMDINESPVYVLLNP+INHA KDLPVTIYESELHVIEGIPQLIFVRSSY
Sbjct: 128 ALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIEGIPQLIFVRSSY 187

Query: 221 TIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGVHSAIKMLNSRIKVLHHYILAMQK 42
           TIETVEAERISVDHVAHLKPSDGGSAATQLAAHL G+HSAIKMLNSRI++LH Y+LAMQ 
Sbjct: 188 TIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYLLAMQN 247

Query: 41  GDVPYEHSLARQV 3
           GD+P E+SL RQV
Sbjct: 248 GDIPLENSLLRQV 260