BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004138
         (1525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP54302.1| ARF domain class transcription factor [Pyrus x br...   303   6e-80
gb|ADL36583.1| ARF domain class transcription factor [Malus x do...   296   7e-78
ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ri...   289   1e-75
ref|XP_002285483.2| PREDICTED: auxin-responsive protein IAA13-li...   289   2e-75
ref|XP_002285481.1| PREDICTED: auxin-responsive protein IAA13-li...   281   4e-73

>gb|AFP54302.1| ARF domain class transcription factor [Pyrus x bretschneideri]
          Length = 306

 Score =  303 bits (777), Expect = 6e-80
 Identities = 179/312 (57%), Positives = 206/312 (66%), Gaps = 2/312 (0%)
 Frame = +3

Query: 246  TVSKAEMV--EQDYVGLSSEVSSYPLNTELDXXXXXXXXXXXXXXXVKAKACSWGEYGRI 419
            T+SKAE+V  EQDYVG+SSE +SYP   EL+                  K C+WGE GRI
Sbjct: 23   TMSKAEVVAVEQDYVGMSSEAASYPAEAELELGLSLGGGGKL------GKPCAWGERGRI 76

Query: 420  LTAKDFPXXXXXXXXXXXXXXXXKAAISPCPTTKPAVSGTKRAADSIAQEGGSPNGTVSN 599
            LTAKDFP                + +  P  +   AVSGTKRAADS+ QEGGSP  T  +
Sbjct: 77   LTAKDFPSMMVSHGGSSAAS---RFSHRPNASAAVAVSGTKRAADSVPQEGGSP--TAVS 131

Query: 600  QVVGWPPLRTSRINILVNQNKHQSVEDDKMVVENSRCKNVTKKKSDDRNNNGSVQTKGHI 779
            QVVGWPP+  +R+N LVNQ K    EDD  V E S+    T KK  +  +  +V+ KGH+
Sbjct: 132  QVVGWPPISAARMNSLVNQAKTARAEDDTAVGEKSKD---TSKKKINVGSKTTVKEKGHL 188

Query: 780  GNTLFVKVNMDGVPIGRKVDLNAHACYETLAQVLEDMFFYSPTAATTTNFIRSSEEKEHG 959
            G   FVKVNMDG+PIGRKVDLNAH+CYETLAQ LE+MF  SPT A     I    E    
Sbjct: 189  G---FVKVNMDGIPIGRKVDLNAHSCYETLAQTLEEMFI-SPTTA-----IGGDTE---- 235

Query: 960  AEAKKTSKLLGGSSEFVLTYEDKDGDWMLVGDVPWGMFLNTVKRLRIMRTSEANGLAPRF 1139
             +AKK SKLL GSSEFVLTYEDK+GDWMLVGDVPWGMFL +VKRLRIMRTSEANGLAPRF
Sbjct: 236  -QAKKPSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGLAPRF 294

Query: 1140 HGSSDRQRNKPI 1175
               S+RQRNKPI
Sbjct: 295  QERSERQRNKPI 306


>gb|ADL36583.1| ARF domain class transcription factor [Malus x domestica]
          Length = 306

 Score =  296 bits (759), Expect = 7e-78
 Identities = 176/312 (56%), Positives = 203/312 (65%), Gaps = 2/312 (0%)
 Frame = +3

Query: 246  TVSKAEMV--EQDYVGLSSEVSSYPLNTELDXXXXXXXXXXXXXXXVKAKACSWGEYGRI 419
            T+SKAE+V  EQDYVG+SSE +SYP   EL+                 +  C+WGE GRI
Sbjct: 23   TMSKAEVVAVEQDYVGMSSEATSYPAEAELELGLSLGGGGKL------SNPCAWGERGRI 76

Query: 420  LTAKDFPXXXXXXXXXXXXXXXXKAAISPCPTTKPAVSGTKRAADSIAQEGGSPNGTVSN 599
            LTAKD P                + +  P  +   AVSGTKRAADS  QEGGSP  T  +
Sbjct: 77   LTAKDLPSMVVSRGASSAAS---RFSHRPNASAAVAVSGTKRAADSAPQEGGSP--TAVS 131

Query: 600  QVVGWPPLRTSRINILVNQNKHQSVEDDKMVVENSRCKNVTKKKSDDRNNNGSVQTKGHI 779
            QVVGWPP+  +R+N LVNQ K    EDD  V E S+    T KK  +  +  +V+ KGH+
Sbjct: 132  QVVGWPPISAARMNSLVNQAKTARAEDDTAVGEKSKD---TSKKKINVGSKTTVKEKGHL 188

Query: 780  GNTLFVKVNMDGVPIGRKVDLNAHACYETLAQVLEDMFFYSPTAATTTNFIRSSEEKEHG 959
            G   FVKVNMDG+PIGRKVDLNAH+CYETLAQ LE+MF  SPT       I    E    
Sbjct: 189  G---FVKVNMDGIPIGRKVDLNAHSCYETLAQTLEEMFI-SPTTT-----IGGDTE---- 235

Query: 960  AEAKKTSKLLGGSSEFVLTYEDKDGDWMLVGDVPWGMFLNTVKRLRIMRTSEANGLAPRF 1139
             +AKK SKLL GSSEFVLTYEDK+GDWMLVGDVPWGMFL +VKRLRIMRTSEANGLAPRF
Sbjct: 236  -QAKKPSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGLAPRF 294

Query: 1140 HGSSDRQRNKPI 1175
               S+RQRNKPI
Sbjct: 295  QERSERQRNKPI 306


>ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
            gi|223532214|gb|EEF34018.1| Auxin-responsive protein
            IAA13, putative [Ricinus communis]
          Length = 318

 Score =  289 bits (740), Expect = 1e-75
 Identities = 170/312 (54%), Positives = 199/312 (63%), Gaps = 3/312 (0%)
 Frame = +3

Query: 249  VSKAEMVEQDYVGLSSEVSSYPLNTELDXXXXXXXXXXXXXXXV---KAKACSWGEYGRI 419
            VSK E+V      + +E SSYP+  EL+                   K KA +WGE GRI
Sbjct: 30   VSKVEVV------VDAEASSYPVEAELELGLGLSIGGSGGGGGGGGGKGKANAWGECGRI 83

Query: 420  LTAKDFPXXXXXXXXXXXXXXXXKAAISPCPTTKPAVSGTKRAADSIAQEGGSPNGTVSN 599
            LTAKDFP                K   + C     AVSGTKRAADS++ EGGSP  T ++
Sbjct: 84   LTAKDFPSVVSQPIRCNNNSN--KGTATAC--VAGAVSGTKRAADSVSHEGGSP--TAAS 137

Query: 600  QVVGWPPLRTSRINILVNQNKHQSVEDDKMVVENSRCKNVTKKKSDDRNNNGSVQTKGHI 779
            Q+VGWPP+RT RIN LVNQ K    E+DK VVE  + K+ +KK  +    N +   KGH+
Sbjct: 138  QIVGWPPVRTYRINSLVNQAKASRSEEDKSVVEQDKSKDASKKICNGSKTNATNNEKGHL 197

Query: 780  GNTLFVKVNMDGVPIGRKVDLNAHACYETLAQVLEDMFFYSPTAATTTNFIRSSEEKEHG 959
            G   FVKVNMDG+PIGRKVDLNAHA YETLAQ LEDMFF S  +  +T       EK+  
Sbjct: 198  G---FVKVNMDGIPIGRKVDLNAHASYETLAQTLEDMFFRSTPSINSTG-----GEKQ-- 247

Query: 960  AEAKKTSKLLGGSSEFVLTYEDKDGDWMLVGDVPWGMFLNTVKRLRIMRTSEANGLAPRF 1139
             ++ K SKLL GSSEFVLTYEDK+GDWMLVGDVPWGMFL +VKRLRIMRTSEANGLAPRF
Sbjct: 248  -QSTKPSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRF 306

Query: 1140 HGSSDRQRNKPI 1175
               + RQR KPI
Sbjct: 307  QERTGRQRRKPI 318


>ref|XP_002285483.2| PREDICTED: auxin-responsive protein IAA13-like isoform 2 [Vitis
            vinifera]
          Length = 321

 Score =  289 bits (739), Expect = 2e-75
 Identities = 179/325 (55%), Positives = 209/325 (64%), Gaps = 15/325 (4%)
 Frame = +3

Query: 246  TVSKAEMVEQDYVGLSSEVSSYPLNTELDXXXXXXXXXXXXXXX--VKAK--ACSWGEYG 413
            TVSK E+VEQ    +S+E SSYP   EL+                 VK K  + +WGEYG
Sbjct: 29   TVSKVEVVEQ----MSTEASSYPGEAELELGLGLSLGTGGGGGGGLVKPKQPSSAWGEYG 84

Query: 414  RILTAKDFPXXXXXXXXXXXXXXXXKAAISPCPTTKPA--------VSGTKRAADS-IAQ 566
            RILTAKDFP                 + +S   +T P         VSGTKRAADS ++Q
Sbjct: 85   RILTAKDFP-----------------SVLSNASSTAPRFSNSSAGPVSGTKRAADSAVSQ 127

Query: 567  EGGSPNGTVSNQVVGWPPLRTSRINILVNQNKHQSVEDDKMVVENSRCKNVTKKK--SDD 740
            E GS   T ++QVVGWPP+R  R+N LVNQ K  + EDDK   EN + K+  KKK  +  
Sbjct: 128  EVGS--ATAASQVVGWPPIRAYRMNSLVNQAKALAAEDDKADSENDKFKDTLKKKPYTGS 185

Query: 741  RNNNGSVQTKGHIGNTLFVKVNMDGVPIGRKVDLNAHACYETLAQVLEDMFFYSPTAATT 920
              NN +V+ KGH+G   FVKVNMDG+PIGRKVDL+AHACY TLAQ LEDMFF   T   T
Sbjct: 186  NKNNSTVKEKGHLG---FVKVNMDGLPIGRKVDLDAHACYGTLAQTLEDMFFRHNT---T 239

Query: 921  TNFIRSSEEKEHGAEAKKTSKLLGGSSEFVLTYEDKDGDWMLVGDVPWGMFLNTVKRLRI 1100
               IRS  EK    ++   SKLL GSSEFVLTYEDK+GDWMLVGDVPWGMFL+TVKRLRI
Sbjct: 240  MPPIRSDVEK---GQSTNPSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLSTVKRLRI 296

Query: 1101 MRTSEANGLAPRFHGSSDRQRNKPI 1175
            MRTSEANGLAPRF   S+RQR+KPI
Sbjct: 297  MRTSEANGLAPRFQERSERQRSKPI 321


>ref|XP_002285481.1| PREDICTED: auxin-responsive protein IAA13-like isoform 1 [Vitis
            vinifera]
          Length = 314

 Score =  281 bits (718), Expect = 4e-73
 Identities = 173/325 (53%), Positives = 202/325 (62%), Gaps = 15/325 (4%)
 Frame = +3

Query: 246  TVSKAEMVEQDYVGLSSEVSSYPLNTELDXXXXXXXXXXXXXXX--VKAK--ACSWGEYG 413
            TVSK E+VEQ    +S+E SSYP   EL+                 VK K  + +WGEYG
Sbjct: 29   TVSKVEVVEQ----MSTEASSYPGEAELELGLGLSLGTGGGGGGGLVKPKQPSSAWGEYG 84

Query: 414  RILTAKDFPXXXXXXXXXXXXXXXXKAAISPCPTTKPA--------VSGTKRAADS-IAQ 566
            RILTAKDFP                 + +S   +T P         VSGTKRAADS ++Q
Sbjct: 85   RILTAKDFP-----------------SVLSNASSTAPRFSNSSAGPVSGTKRAADSAVSQ 127

Query: 567  EGGSPNGTVSNQVVGWPPLRTSRINILVNQNKHQSVEDDKMVVENSRCKNVTKKK--SDD 740
            E GS     S+QVVGWPP+R  R+N LVNQ K  + EDDK   EN + K+  KKK  +  
Sbjct: 128  EVGSATAA-SSQVVGWPPIRAYRMNSLVNQAKALAAEDDKADSENDKFKDTLKKKPYTGS 186

Query: 741  RNNNGSVQTKGHIGNTLFVKVNMDGVPIGRKVDLNAHACYETLAQVLEDMFFYSPTAATT 920
              NN +V+ KGH+G   FVKVNMDG+PIGRKVDL+AHACY TLAQ LEDMFF   T    
Sbjct: 187  NKNNSTVKEKGHLG---FVKVNMDGLPIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPR 243

Query: 921  TNFIRSSEEKEHGAEAKKTSKLLGGSSEFVLTYEDKDGDWMLVGDVPWGMFLNTVKRLRI 1100
                          ++   SKLL GSSEFVLTYEDK+GDWMLVGDVPWGMFL+TVKRLRI
Sbjct: 244  --------------QSTNPSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLSTVKRLRI 289

Query: 1101 MRTSEANGLAPRFHGSSDRQRNKPI 1175
            MRTSEANGLAPRF   S+RQR+KPI
Sbjct: 290  MRTSEANGLAPRFQERSERQRSKPI 314