BLASTX nr result

ID: Cimicifuga21_contig00004131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004131
         (1366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530576.1| 60S ribosomal protein L51, putative [Ricinus...   218   4e-54
ref|XP_003550025.1| PREDICTED: 60S ribosomal protein L51, mitoch...   217   6e-54
ref|XP_002276080.1| PREDICTED: 60S ribosomal protein L51, mitoch...   214   5e-53
gb|AFK38190.1| unknown [Medicago truncatula]                          212   2e-52
ref|XP_003627415.1| Mitochondrial ribosomal protein L43 [Medicag...   211   4e-52

>ref|XP_002530576.1| 60S ribosomal protein L51, putative [Ricinus communis]
           gi|223529875|gb|EEF31806.1| 60S ribosomal protein L51,
           putative [Ricinus communis]
          Length = 119

 Score =  218 bits (554), Expect = 4e-54
 Identities = 104/119 (87%), Positives = 109/119 (91%)
 Frame = +1

Query: 310 MALRGVWQLQKLIVSYCDWGGSSRGIRAFMEFELPKFKDGNPQLEVVTELIRGQHPHLKA 489
           MALRGVWQLQKL+VSYCDWGGSSRGIRAFME  LP FK+GNPQLEV+TEL RGQHP LK 
Sbjct: 1   MALRGVWQLQKLVVSYCDWGGSSRGIRAFMESHLPVFKEGNPQLEVITELNRGQHPLLKG 60

Query: 490 FYKNKNERVVCVKNLDPDEVLLHATRLRNALGRKVVKLKTRHVTRHPSVQGTWTTETRF 666
           FYKNKNERVVCVKNL PDEVLL ATRLRN+LGRKVVKLKTRHVT+HPSVQGTWTT  RF
Sbjct: 61  FYKNKNERVVCVKNLTPDEVLLQATRLRNSLGRKVVKLKTRHVTQHPSVQGTWTTAVRF 119


>ref|XP_003550025.1| PREDICTED: 60S ribosomal protein L51, mitochondrial-like [Glycine
           max]
          Length = 119

 Score =  217 bits (552), Expect = 6e-54
 Identities = 99/119 (83%), Positives = 111/119 (93%)
 Frame = +1

Query: 310 MALRGVWQLQKLIVSYCDWGGSSRGIRAFMEFELPKFKDGNPQLEVVTELIRGQHPHLKA 489
           MALRGVWQL KLIVSYC+WGGSSRGIRAFME  LP FK+ NPQLEVVTELIRGQHPHLKA
Sbjct: 1   MALRGVWQLNKLIVSYCNWGGSSRGIRAFMESHLPTFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 490 FYKNKNERVVCVKNLDPDEVLLHATRLRNALGRKVVKLKTRHVTRHPSVQGTWTTETRF 666
           +YKNKN+RV+CVKN+DP+++LLHATRLRNALGRKVVKL+TRHVT+HPSVQGTWTT   +
Sbjct: 61  YYKNKNQRVICVKNMDPEDILLHATRLRNALGRKVVKLRTRHVTKHPSVQGTWTTAVEY 119


>ref|XP_002276080.1| PREDICTED: 60S ribosomal protein L51, mitochondrial isoform 1
           [Vitis vinifera] gi|225434100|ref|XP_002276106.1|
           PREDICTED: 60S ribosomal protein L51, mitochondrial
           isoform 2 [Vitis vinifera] gi|147861396|emb|CAN83982.1|
           hypothetical protein VITISV_001097 [Vitis vinifera]
           gi|296084281|emb|CBI24669.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  214 bits (544), Expect = 5e-53
 Identities = 101/118 (85%), Positives = 108/118 (91%)
 Frame = +1

Query: 310 MALRGVWQLQKLIVSYCDWGGSSRGIRAFMEFELPKFKDGNPQLEVVTELIRGQHPHLKA 489
           MALRGVWQLQKLIVSY DWGGSSRGIRAFME  LP FK+ NPQLEVVTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTELIRGQHPHLKG 60

Query: 490 FYKNKNERVVCVKNLDPDEVLLHATRLRNALGRKVVKLKTRHVTRHPSVQGTWTTETR 663
           FYKNKNERV+CVKN+ P++VL HATRLRNALGRKV+KLKTRHVT+HPSVQGTWTT  R
Sbjct: 61  FYKNKNERVICVKNMTPEDVLHHATRLRNALGRKVLKLKTRHVTKHPSVQGTWTTAMR 118


>gb|AFK38190.1| unknown [Medicago truncatula]
          Length = 119

 Score =  212 bits (540), Expect = 2e-52
 Identities = 96/119 (80%), Positives = 111/119 (93%)
 Frame = +1

Query: 310 MALRGVWQLQKLIVSYCDWGGSSRGIRAFMEFELPKFKDGNPQLEVVTELIRGQHPHLKA 489
           MALRGVWQL+KL+VS+ DWGGSSRGIRAFME  LP FK+ NPQLEV TE+IRGQHPHLKA
Sbjct: 1   MALRGVWQLKKLVVSFSDWGGSSRGIRAFMESHLPAFKEANPQLEVDTEMIRGQHPHLKA 60

Query: 490 FYKNKNERVVCVKNLDPDEVLLHATRLRNALGRKVVKLKTRHVTRHPSVQGTWTTETRF 666
           FYKN+N+RVVCVKN+DP+E+LLHATRLRNALGRKV+KL+TRHVT+HPSVQGTWTT  ++
Sbjct: 61  FYKNRNDRVVCVKNMDPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 119


>ref|XP_003627415.1| Mitochondrial ribosomal protein L43 [Medicago truncatula]
           gi|355521437|gb|AET01891.1| Mitochondrial ribosomal
           protein L43 [Medicago truncatula]
          Length = 119

 Score =  211 bits (537), Expect = 4e-52
 Identities = 96/119 (80%), Positives = 110/119 (92%)
 Frame = +1

Query: 310 MALRGVWQLQKLIVSYCDWGGSSRGIRAFMEFELPKFKDGNPQLEVVTELIRGQHPHLKA 489
           MALRGVWQL+KL+VS+ DWGGSSRGIRAFME  LP FK+ NPQLEV TE+IRGQHPHLKA
Sbjct: 1   MALRGVWQLKKLVVSFSDWGGSSRGIRAFMESHLPAFKEANPQLEVDTEMIRGQHPHLKA 60

Query: 490 FYKNKNERVVCVKNLDPDEVLLHATRLRNALGRKVVKLKTRHVTRHPSVQGTWTTETRF 666
           FYKN N+RVVCVKN+DP+E+LLHATRLRNALGRKV+KL+TRHVT+HPSVQGTWTT  ++
Sbjct: 61  FYKNHNDRVVCVKNMDPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 119


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