BLASTX nr result

ID: Cimicifuga21_contig00004130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004130
         (1493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Gly...   392   e-106
ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Gly...   389   e-105
ref|XP_002279638.1| PREDICTED: F-box protein At4g00755-like [Vit...   364   4e-98
emb|CBI31833.3| unnamed protein product [Vitis vinifera]              347   4e-93
ref|XP_002511796.1| conserved hypothetical protein [Ricinus comm...   343   9e-92

>ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 374

 Score =  392 bits (1008), Expect = e-106
 Identities = 203/367 (55%), Positives = 265/367 (72%), Gaps = 13/367 (3%)
 Frame = +2

Query: 152  DFLELLGPDVSTNILSFLDDPVDIVRASAVSHSWRQFVIENGFCKRLCLQLFSEVSSAAH 331
            DF++LLGPD+S  IL+ LDDP D++R SAVS SW +FVIE G CK+LCL++F E+S  AH
Sbjct: 9    DFIQLLGPDMSIKILTHLDDPCDLIRVSAVSSSWHRFVIEQGLCKQLCLKMFPEISGVAH 68

Query: 332  AIEIDEVIQPMKVAFSNKV-LENLEKIHGVYAFLARGLSPTLRNDCILEAISATSTDNYP 508
             +E+D +I+P+     + V  E+L++IH VYAFLA GL+P +R +CI ++ISA+STDNYP
Sbjct: 69   IVELDNIIEPLINTLGSYVNWESLKRIHRVYAFLASGLTP-MRKNCISKSISASSTDNYP 127

Query: 509  EESIQNTLEPMDRIEHKASYWSSEGESDAAVPEKLTYKLISDLCFISEIKIRPFQAYFQY 688
            EESI +TLEP DR +++ASYWSS+GES  +VPE L YKL S LC ++EI + PFQAYFQ+
Sbjct: 128  EESILHTLEPGDRTQYRASYWSSKGESHPSVPETLVYKLASKLCLVTEIYVHPFQAYFQH 187

Query: 689  GLPIYSAKAVRFRMGHLKAPLYVE-LMDALRIDDC-----FEWTYVSPEFPMAQENCIQT 850
            G PIYSAKAVRFRMGH + P+ +E  +D +  +D      F WTY SPEFPM QEN +Q 
Sbjct: 188  GFPIYSAKAVRFRMGHPRHPMELESAVDKMATNDVLGDNQFIWTYTSPEFPMFQENRLQK 247

Query: 851  FKLPEPVLCIGGTLQVELLGRVQKQEMDGLFYICISHVQVVGRTLSPGFNVQFTGRPGKC 1030
            FKLPEPVLCIGG L VELLGRVQKQEMD LFYICISHVQ +GR++SP F+V+     GKC
Sbjct: 248  FKLPEPVLCIGGVLLVELLGRVQKQEMDELFYICISHVQAMGRSISPEFDVKIHHPSGKC 307

Query: 1031 MVKYCPESE-NGTXXXXXXXXXXXXXXQLNTFTARLMRR-AGGWERVILNTLLGN----V 1192
             +KYCP+ +   +              +L T T+ +M+R    WE+ +L+ LLG     V
Sbjct: 308  TLKYCPQIDCYVSSSTSSQRSDSSNPSRLRTITSNIMQRGVRRWEQFLLSALLGTATDPV 367

Query: 1193 VVDSDNE 1213
            VVD+D++
Sbjct: 368  VVDNDDQ 374


>ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 372

 Score =  389 bits (999), Expect = e-105
 Identities = 204/363 (56%), Positives = 260/363 (71%), Gaps = 9/363 (2%)
 Frame = +2

Query: 152  DFLELLGPDVSTNILSFLDDPVDIVRASAVSHSWRQFVIENGFCKRLCLQLFSEVSSAAH 331
            DF++LLGPD+S  IL+ LDDP D++R S+VS SW +FVIE+G CK+LCL++F E+S  AH
Sbjct: 9    DFIQLLGPDMSIKILTHLDDPCDLIRVSSVSSSWHRFVIEHGLCKQLCLKMFPEISGVAH 68

Query: 332  AIEIDEVIQPMKVAFSNKVL-ENLEKIHGVYAFLARGLSPTLRNDCILEAISATSTDNYP 508
             IE+D +I+P+     + V  E+ ++ H VYAFLA GL+P +R +CI +AISA+STDNYP
Sbjct: 69   IIELDNIIEPLSNTLGSYVSWESHKRNHRVYAFLASGLTP-MRKNCISKAISASSTDNYP 127

Query: 509  EESIQNTLEPMDRIEHKASYWSSEGESDAAVPEKLTYKLISDLCFISEIKIRPFQAYFQY 688
            EESI +TLEP DR E++ASYWSS+GESD +VPE L Y+L S LC ++EI + PFQAYFQ+
Sbjct: 128  EESILHTLEPGDRTEYRASYWSSKGESDPSVPETLVYELASKLCLVTEIYVHPFQAYFQH 187

Query: 689  GLPIYSAKAVRFRMGHLKAPLYVEL----MDALRI--DDCFEWTYVSPEFPMAQENCIQT 850
            G PIYSAKAVRFRMGH K P+ +E     M A  +  ++ F WTY SPEFPM QEN +Q 
Sbjct: 188  GFPIYSAKAVRFRMGHSKHPMELESPVDNMAANHVLGNNQFIWTYTSPEFPMLQENRLQK 247

Query: 851  FKLPEPVLCIGGTLQVELLGRVQKQEMDGLFYICISHVQVVGRTLSPGFNVQFTGRPGKC 1030
            FKLPEPVLCIGG L VELLGRVQKQEMD LFYICISHVQV+GR L P F+V+     GKC
Sbjct: 248  FKLPEPVLCIGGVLLVELLGRVQKQEMDELFYICISHVQVMGRLLFPEFDVKIHHWSGKC 307

Query: 1031 MVKYCPESE-NGTXXXXXXXXXXXXXXQLNTFTARLMRR-AGGWERVILNTLLGNVVVDS 1204
             +KYCP+++   +              +L T T+ +M+R    WE+ +L  LLG   V  
Sbjct: 308  TLKYCPQTDCYMSSPTSSPRSNSSNPSRLRTITSSIMQRGVRRWEQFLLGALLGTGPVVV 367

Query: 1205 DNE 1213
            DNE
Sbjct: 368  DNE 370


>ref|XP_002279638.1| PREDICTED: F-box protein At4g00755-like [Vitis vinifera]
          Length = 368

 Score =  364 bits (934), Expect = 4e-98
 Identities = 186/311 (59%), Positives = 228/311 (73%), Gaps = 8/311 (2%)
 Frame = +2

Query: 134  VMGCLRDFLELLGPDVSTNILSFLDDPVDIVRASAVSHSWRQFVIENGFCKRLCLQLFSE 313
            VMG   DF+  LG D+S  IL  L+DP D+VR S VS  WRQFVIENG  K+LCL++  E
Sbjct: 3    VMGDGNDFIRWLGRDMSIKILMCLEDPSDLVRVSTVSRLWRQFVIENGLSKQLCLRMLPE 62

Query: 314  VSSAAHAIEIDEVIQPMKVAFSNKVLENLEKIHGVYAFLARGLSPTLRNDCILEAISATS 493
            +SS A AIEI+ +I+  +V  +N   + LEK H VYA+LA+GL+ ++R  CI  AISA+S
Sbjct: 63   MSSLAGAIEINNMIETEEVQSNNMERKILEKNHRVYAYLAQGLTSSMRTACIARAISASS 122

Query: 494  TDNYPEESIQNTLEPMDRIEHKASYWSSEGESDAAVPEKLTYKLISDLCFISEIKIRPFQ 673
            TDNYPEE+I NTL+P DRI H ASYWSSEGE D ++PE L YKLI++LC ++EI ++PFQ
Sbjct: 123  TDNYPEETIDNTLDPRDRIRHSASYWSSEGEMDPSIPESLVYKLIANLCVVTEIHVQPFQ 182

Query: 674  AYFQYGLPIYSAKAVRFRMGHLKAPLYVELMDALR--------IDDCFEWTYVSPEFPMA 829
            AYFQ+G PIYSAKAVRFRMGH   P+     DA          ++D + WTY SPEFPMA
Sbjct: 183  AYFQFGHPIYSAKAVRFRMGHQMYPM-ERGGDAANDPAAGFDSLEDQYIWTYTSPEFPMA 241

Query: 830  QENCIQTFKLPEPVLCIGGTLQVELLGRVQKQEMDGLFYICISHVQVVGRTLSPGFNVQF 1009
            QEN +Q FKLPEP LCIGG LQ+ELLGRVQKQEMDGL+YIC+SHVQVVGR LS  F+V+ 
Sbjct: 242  QENRLQKFKLPEPALCIGGILQIELLGRVQKQEMDGLYYICVSHVQVVGRPLSEAFDVEI 301

Query: 1010 TGRPGKCMVKY 1042
                GK  +KY
Sbjct: 302  HDPSGKFTLKY 312


>emb|CBI31833.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  347 bits (891), Expect = 4e-93
 Identities = 175/288 (60%), Positives = 215/288 (74%), Gaps = 8/288 (2%)
 Frame = +2

Query: 203  LDDPVDIVRASAVSHSWRQFVIENGFCKRLCLQLFSEVSSAAHAIEIDEVIQPMKVAFSN 382
            L+DP D+VR S VS  WRQFVIENG  K+LCL++  E+SS A AIEI+ +I+  +V  +N
Sbjct: 3    LEDPSDLVRVSTVSRLWRQFVIENGLSKQLCLRMLPEMSSLAGAIEINNMIETEEVQSNN 62

Query: 383  KVLENLEKIHGVYAFLARGLSPTLRNDCILEAISATSTDNYPEESIQNTLEPMDRIEHKA 562
               + LEK H VYA+LA+GL+ ++R  CI  AISA+STDNYPEE+I NTL+P DRI H A
Sbjct: 63   MERKILEKNHRVYAYLAQGLTSSMRTACIARAISASSTDNYPEETIDNTLDPRDRIRHSA 122

Query: 563  SYWSSEGESDAAVPEKLTYKLISDLCFISEIKIRPFQAYFQYGLPIYSAKAVRFRMGHLK 742
            SYWSSEGE D ++PE L YKLI++LC ++EI ++PFQAYFQ+G PIYSAKAVRFRMGH  
Sbjct: 123  SYWSSEGEMDPSIPESLVYKLIANLCVVTEIHVQPFQAYFQFGHPIYSAKAVRFRMGHQM 182

Query: 743  APLYVELMDALR--------IDDCFEWTYVSPEFPMAQENCIQTFKLPEPVLCIGGTLQV 898
             P+     DA          ++D + WTY SPEFPMAQEN +Q FKLPEP LCIGG LQ+
Sbjct: 183  YPM-ERGGDAANDPAAGFDSLEDQYIWTYTSPEFPMAQENRLQKFKLPEPALCIGGILQI 241

Query: 899  ELLGRVQKQEMDGLFYICISHVQVVGRTLSPGFNVQFTGRPGKCMVKY 1042
            ELLGRVQKQEMDGL+YIC+SHVQVVGR LS  F+V+     GK  +KY
Sbjct: 242  ELLGRVQKQEMDGLYYICVSHVQVVGRPLSEAFDVEIHDPSGKFTLKY 289


>ref|XP_002511796.1| conserved hypothetical protein [Ricinus communis]
            gi|223548976|gb|EEF50465.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 362

 Score =  343 bits (879), Expect = 9e-92
 Identities = 176/300 (58%), Positives = 214/300 (71%), Gaps = 4/300 (1%)
 Frame = +2

Query: 152  DFLELLGPDVSTNILSFLDDPVDIVRASAVSHSWRQFVIENGFCKRLCLQLFSEVSSAAH 331
            DF   L  D    IL  L+DP D+VR S+VS SWR FVI NG CK+LCL++F  + S  H
Sbjct: 6    DFFSWLDYDTVMRILMCLEDPSDLVRVSSVSRSWRHFVIANGLCKQLCLRMFPCLHSVDH 65

Query: 332  AIEIDEVIQPMKVAFSNKV-LENLEKIHGVYAFLARGLSPTLRNDCILEAISATSTDNYP 508
              E D +  P+ +  S  +  E LE+ H V+AFLARG +     +CI EAISA+STDNYP
Sbjct: 66   VTEPDSMKNPLGIGCSKSMEWETLEREHRVFAFLARGCTSFALKECISEAISASSTDNYP 125

Query: 509  EESIQNTLEPMDRIEHKASYWSSEGESDAAVPEKLTYKLISDLCFISEIKIRPFQAYFQY 688
             ESI NTLEP DRI  +ASYWSS+G+S+ AVPE L YKL++D+C I+EI + PFQA+FQ 
Sbjct: 126  GESIHNTLEPRDRIARRASYWSSKGQSNPAVPETLIYKLVADICLITEISVHPFQAFFQP 185

Query: 689  GLPIYSAKAVRFRMGHLKAPLYVELMDALRIDDCFE---WTYVSPEFPMAQENCIQTFKL 859
            G PIYSA +VRFRMGHLKAP    + +    D+C +   WTY SPEF MAQEN +Q F+L
Sbjct: 186  GTPIYSANSVRFRMGHLKAPEDDPMSEP--CDNCADDVVWTYTSPEFAMAQENRLQKFEL 243

Query: 860  PEPVLCIGGTLQVELLGRVQKQEMDGLFYICISHVQVVGRTLSPGFNVQFTGRPGKCMVK 1039
            PEPVLCIGG LQVELLGRVQKQEMDGLFYIC+SHVQV+GR LSP F  +   R GK ++K
Sbjct: 244  PEPVLCIGGILQVELLGRVQKQEMDGLFYICVSHVQVLGRPLSPAFTFEILERSGKFVLK 303


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