BLASTX nr result

ID: Cimicifuga21_contig00004111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004111
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]             160   3e-37
dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgar...   152   9e-35
ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein ...   151   1e-34
ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group] g...   151   2e-34
ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding prote...   150   2e-34

>gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
          Length = 139

 Score =  160 bits (405), Expect = 3e-37
 Identities = 76/97 (78%), Positives = 87/97 (89%)
 Frame = -2

Query: 555 TNLFVSGLNKRTTTEGLREAFAKFGDVVHARVVTDRLNGYSKGFGFVRYATLEEAAQGIE 376
           TNLFVSGL+KRTTTEGLREAFAKFG+VVHARVVTDR++GYSKGFGFV+YATLE+AA+GI+
Sbjct: 36  TNLFVSGLSKRTTTEGLREAFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAEGIK 95

Query: 375 GMDGKYLDGWVIFAEYARPREQQPHPQYAGAPPTPRY 265
           GMDGK+LDGWVIFAEYARPR   P PQ +  P   +Y
Sbjct: 96  GMDGKFLDGWVIFAEYARPRAPPPPPQNSDFPSNNQY 132


>dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326517426|dbj|BAK00080.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 153

 Score =  152 bits (383), Expect = 9e-35
 Identities = 72/95 (75%), Positives = 84/95 (88%)
 Frame = -2

Query: 552 NLFVSGLNKRTTTEGLREAFAKFGDVVHARVVTDRLNGYSKGFGFVRYATLEEAAQGIEG 373
           NLFVSGL+KRTTT+GLREAFAKFG+V HARV+TDR+ G+SKGFGFVRY T+E+AA+GIEG
Sbjct: 49  NLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEG 108

Query: 372 MDGKYLDGWVIFAEYARPREQQPHPQYAGAPPTPR 268
           MDG++LDGWVIFAEYARPR   P PQ  GA P P+
Sbjct: 109 MDGEFLDGWVIFAEYARPR---PPPQMGGATPQPQ 140


>ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|147854770|emb|CAN78606.1| hypothetical protein
           VITISV_024164 [Vitis vinifera]
           gi|302143178|emb|CBI20473.3| unnamed protein product
           [Vitis vinifera]
          Length = 135

 Score =  151 bits (382), Expect = 1e-34
 Identities = 74/96 (77%), Positives = 85/96 (88%)
 Frame = -2

Query: 555 TNLFVSGLNKRTTTEGLREAFAKFGDVVHARVVTDRLNGYSKGFGFVRYATLEEAAQGIE 376
           TNLFVSGL+KRTT+EGL EAF+KFG VV+ARVVTDR++GYSKGFGFVRY +LE+AA+GI+
Sbjct: 41  TNLFVSGLSKRTTSEGLHEAFSKFGQVVNARVVTDRVSGYSKGFGFVRYVSLEDAAEGIK 100

Query: 375 GMDGKYLDGWVIFAEYARPREQQPHPQYAGAPPTPR 268
           GMDGK+LDGWVIFAEYARPR   P PQ  GAPP  R
Sbjct: 101 GMDGKFLDGWVIFAEYARPR-PPPSPQNNGAPPYGR 135


>ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
           gi|38636774|dbj|BAD03017.1| putative RNA recognition
           motif (RRM)-containing protein [Oryza sativa Japonica
           Group] gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza
           sativa Japonica Group] gi|215767574|dbj|BAG99802.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222639884|gb|EEE68016.1| hypothetical protein
           OsJ_25986 [Oryza sativa Japonica Group]
          Length = 141

 Score =  151 bits (381), Expect = 2e-34
 Identities = 73/99 (73%), Positives = 87/99 (87%), Gaps = 6/99 (6%)
 Frame = -2

Query: 552 NLFVSGLNKRTTTEGLREAFAKFGDVVHARVVTDRLNGYSKGFGFVRYATLEEAAQGIEG 373
           NLF+SGL+KRTTT+GL+EAFAKFG+V+HARVVTDR+ G+SKGFGFVRYAT+E+AA+GIEG
Sbjct: 37  NLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEG 96

Query: 372 MDGKYLDGWVIFAEYARPR--EQQP----HPQYAGAPPT 274
           MDGK+LDGWVIFAEYARPR   QQP     PQ +  PP+
Sbjct: 97  MDGKFLDGWVIFAEYARPRTPPQQPEMNSQPQQSWGPPS 135


>ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           [Brachypodium distachyon]
          Length = 138

 Score =  150 bits (380), Expect = 2e-34
 Identities = 70/96 (72%), Positives = 83/96 (86%)
 Frame = -2

Query: 552 NLFVSGLNKRTTTEGLREAFAKFGDVVHARVVTDRLNGYSKGFGFVRYATLEEAAQGIEG 373
           NLFVSGLNKRTTT+GLREAF+KFG V  ARV+TDR++GYS+GFGFV+YAT+EEA +GI+G
Sbjct: 41  NLFVSGLNKRTTTDGLREAFSKFGQVTEARVITDRISGYSRGFGFVKYATVEEAGEGIKG 100

Query: 372 MDGKYLDGWVIFAEYARPREQQPHPQYAGAPPTPRY 265
           MDGK+LDGWVIFAEYA+ RE Q  PQ AG P   +Y
Sbjct: 101 MDGKFLDGWVIFAEYAKQREAQQPPQSAGTPSGYQY 136


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