BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004101
         (3544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519032.1| double-stranded RNA binding protein, putativ...  1108   0.0  
ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|2...  1097   0.0  
ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...  1093   0.0  
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]  1089   0.0  
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...  1081   0.0  

>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223541695|gb|EEF43243.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 978

 Score = 1108 bits (2865), Expect = 0.0
 Identities = 597/985 (60%), Positives = 701/985 (71%), Gaps = 43/985 (4%)
 Frame = -2

Query: 3219 MFKSVVYQGNSLLGEVEIYP--------------------KNQIIDTMMKNKDIIRITHF 3100
            M+KSVVY+G+ LLGEVEIY                     K ++ID ++K    IRI+HF
Sbjct: 1    MYKSVVYKGDELLGEVEIYAQQEQKLQQQEELQEQEQELKKKRVIDEILKG---IRISHF 57

Query: 3099 SQQSERCPPLAVLHTIAPCGFCFKLEPTTNSQSEDSPLFSLHSSCLRENKTAVVPY-GEE 2923
            SQ SERCPPLAVLHTI   G CFK+E + NS S D+PL  LHSSC++E+KTAVV   G E
Sbjct: 58   SQASERCPPLAVLHTITTNGICFKME-SKNSVSLDTPLHLLHSSCIQESKTAVVLLQGGE 116

Query: 2922 ELHLVAMPSRRNVEHYSCFWGFIAAAGLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSF 2743
            ELHLVAM SR +   Y CFW F  ++GLY+SCLVMLNLRCLGIVFDLDETLIVANTMRSF
Sbjct: 117  ELHLVAMFSRNDERQYPCFWAFNISSGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSF 176

Query: 2742 EDRIEALQRKLNTEMDPQRVSGMLAEVKRYQDDKIILKQYVENDQVVENGKVIKVQSEMV 2563
            EDRIEALQRK++TE+DPQR+SGML+EVKRYQDDK ILKQYV+NDQVVENG+VIK Q E+V
Sbjct: 177  EDRIEALQRKISTELDPQRISGMLSEVKRYQDDKTILKQYVDNDQVVENGRVIKTQFEVV 236

Query: 2562 PALSEDHQPIVRPIIRLREKNIVLTRINPLIRDTSVLVRLRPAWEELRSYLTARGRKRFE 2383
            PALS++HQ IVRP+IRL+E+NI+LTRINP IRDTSVLVRLRPAWEELRSYLTARGRKRFE
Sbjct: 237  PALSDNHQTIVRPLIRLQERNIILTRINPQIRDTSVLVRLRPAWEELRSYLTARGRKRFE 296

Query: 2382 VYVCTMAERDYALEMWRLLDPESNLINSRELLDRIVCVKAGSRKSLLNVFHDGICHPKMA 2203
            VYVCTMAERDYALEMWRLLDPESNLINS+ELLDRIVCVK+G RKSL NVF DGICHPKMA
Sbjct: 297  VYVCTMAERDYALEMWRLLDPESNLINSKELLDRIVCVKSGLRKSLFNVFQDGICHPKMA 356

Query: 2202 LVIDDRLKVWDEKDQPRVHVVPAFAPYYAPQAEANNVTPVLCVARNVACNVRGGFFKEFD 2023
            LVIDDRLKVWDEKDQPRVHVVPAFAPYYAPQAEANN  PVLCVARNVACNVRGGFFKEFD
Sbjct: 357  LVIDDRLKVWDEKDQPRVHVVPAFAPYYAPQAEANNAVPVLCVARNVACNVRGGFFKEFD 416

Query: 2022 DGLLQKIFEVSYEDDLADFPSAPDVSNYLISEDD--TAASSKDPLGFEGMADMEVERRLK 1849
            +GLLQ+I E+S+EDD+ D PS PDVSNYL+ EDD  T+  ++DPL F+GMAD EVE+RLK
Sbjct: 417  EGLLQRIPEISFEDDMNDIPSPPDVSNYLVPEDDAFTSNGNRDPLSFDGMADAEVEKRLK 476

Query: 1848 DAISSS----SMTTTLDPRQVVSLQPAVVSMLS-TILKQTPQVMPVQNKIFPVAVSMVKP 1684
            +AIS S    S    LD R V  LQ  + S  S  +    P V+   +   P A  +VKP
Sbjct: 477  EAISISSAFPSTVANLDARLVPPLQYTMASSSSIPVPTSQPAVVTFPSMQLPQAAPLVKP 536

Query: 1683 LGNVGSVEPRLQCSPATEEGEVPESELDPDMRRRLLIMQHGQDTRDQISSEXXXXXXXXX 1504
            LG V   EP LQ SPA EEGEVPESELDPD RRRLLI+QHGQD RD   SE         
Sbjct: 537  LGQVVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDLRDPAPSESPFPVRPSN 596

Query: 1503 XXXXXPG--NSRGIWPPLEENVCSRQLNQSVPKPVMRELPLESDTKHFDKHRNRHPPFSR 1330
                      SRG W P+EE +  RQLN++    V RE P++++  H DKHR  HP F  
Sbjct: 597  SMQVSVPRVQSRGNWVPVEEEMSPRQLNRA----VTREFPMDTEPMHIDKHRPHHPSFFP 652

Query: 1329 GVESSISSDRYLHENQRLLKEAHRVDDRMRLNHSIPKKRTFPGEEMPMDPSVSNNE---- 1162
             VESSI S+R  HENQRL K A   DDR+RLN ++   ++  GEE  +  S S+N     
Sbjct: 653  KVESSIPSERMPHENQRLPKVAPYKDDRLRLNQTMSNYQSLSGEENSLSRSSSSNRDLDV 712

Query: 1161 ---------EHPAGVLQKIARKCQTTVEFKTALISSTELQFSIEVWFTGEKIGEGIGRTR 1009
                     E P  VL +I+ KC   VEFK +L++S +LQFS+E WF GE++GEG GRTR
Sbjct: 713  ESDRAVSSAETPVRVLHEISMKCGAKVEFKHSLVNSRDLQFSVEAWFAGERVGEGFGRTR 772

Query: 1008 REAQCQAAEHALRNLSNKYLANVLPDPVSAHGDLNKLHYVKENGYLGDSISSGYQTAPKE 829
            REAQ  AAE +++NL+N Y++   PD  + HGD +K     +NG+LG   S G Q  PK+
Sbjct: 773  REAQSVAAEASIKNLANIYISRAKPDNGALHGDASKYSSANDNGFLGHVNSFGSQPLPKD 832

Query: 828  SFVPISSKPEPSRFLEPRLEEPKRLTSSVSILNEVCRGEGLAPVFQNHSPLPTNSIIEGE 649
              +  S   E S  L+PRLE  K+  SSV+ L E C  EGL   F   +PL +NS+   E
Sbjct: 833  EILSYSDSSEQSGLLDPRLESSKKSMSSVNALKEFCMMEGLGVNFLAQTPLSSNSVQNAE 892

Query: 648  FHAQVEIGGQVLGKGVGSTWDEAKMRAADEALESSNYIIGQGAQNHAGSPRSFHDLSNKR 469
             HAQVEI GQV+GKG+GST+DEAKM+AA++AL S     G+      GSPR    + NK 
Sbjct: 893  VHAQVEIDGQVMGKGIGSTFDEAKMQAAEKALGSLRTTFGRFPPKRQGSPRPVPGMPNKH 952

Query: 468  QKVEFSRVLQRMPSSLKYSSNTSPV 394
             K EF RVLQRMPSS +Y  N  PV
Sbjct: 953  LKPEFPRVLQRMPSSARYPKNAPPV 977


>ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|222847981|gb|EEE85528.1|
            predicted protein [Populus trichocarpa]
          Length = 967

 Score = 1097 bits (2837), Expect = 0.0
 Identities = 601/986 (60%), Positives = 694/986 (70%), Gaps = 44/986 (4%)
 Frame = -2

Query: 3219 MFKSVVYQGNSLLGEVEIYPKNQ-------------IIDTMMKNKDIIRITHFSQQSERC 3079
            M+KSVVY+G+ LLGEVEIY + Q             +ID ++K    IRI+HFSQ SERC
Sbjct: 1    MYKSVVYKGDELLGEVEIYAQEQQQEEEENKNKKKRVIDEIVKE---IRISHFSQTSERC 57

Query: 3078 PPLAVLHTIAPCGFCFKLEPTTNSQS-----EDSPLFSLHSSCLRENKTAVVPYGEEELH 2914
            PPLAVLHTI   G CFK+E +T+S +     ++SPL  LHSSC++ENKTAV+  G EELH
Sbjct: 58   PPLAVLHTITSIGVCFKMEESTSSSTTKISQQESPLHLLHSSCIQENKTAVMHLGGEELH 117

Query: 2913 LVAMPSRRNVEHYSCFWGFIAAAGLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDR 2734
            LVAMPSR N   + CFWGF  A GLY+SCLVMLNLRCLGIVFDLDETLIVANTMRSFEDR
Sbjct: 118  LVAMPSRSNERQHPCFWGFSVAPGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDR 177

Query: 2733 IEALQRKLNTEMDPQRVSGMLAEVKRYQDDKIILKQYVENDQVVENGKVIKVQSEMVPAL 2554
            I+ALQRK++TE+DPQR+ GML+EVKRY DDK ILKQYVENDQVVENGKVIK QSE+VPAL
Sbjct: 178  IDALQRKISTEVDPQRILGMLSEVKRYHDDKNILKQYVENDQVVENGKVIKTQSEVVPAL 237

Query: 2553 SEDHQPIVRPIIRLREKNIVLTRINPLIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYV 2374
            S++HQP+VRP+IRL+EKNI+LTRINP IRDTSVLVRLRPAWE+LRSYLTARGRKRFEVYV
Sbjct: 238  SDNHQPMVRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYV 297

Query: 2373 CTMAERDYALEMWRLLDPESNLINSRELLDRIVCVKAGS--RKSLLNVFHDGICHPKMAL 2200
            CTMAERDYALEMWRLLDPESNLINS+ELLDRIVCVK+G   RKSL NVF DGICHPKMAL
Sbjct: 298  CTMAERDYALEMWRLLDPESNLINSKELLDRIVCVKSGKCLRKSLFNVFQDGICHPKMAL 357

Query: 2199 VIDDRLKVWDEKDQPRVHVVPAFAPYYAPQAEANNVTPVLCVARNVACNVRGGFFKEFDD 2020
            VIDDRLKVWDE+DQ RVHVVPAFAPYYAPQAE NN  PVLCVARNVACNVRGGFFKEFD+
Sbjct: 358  VIDDRLKVWDERDQSRVHVVPAFAPYYAPQAEVNNAVPVLCVARNVACNVRGGFFKEFDE 417

Query: 2019 GLLQKIFEVSYEDDLADFPSAPDVSNYLISEDDTAA--SSKDPLGFEGMADMEVERRLK- 1849
            GLLQKI EV+YEDD  + PS PDVSNYL+SEDD +A   ++D L F+GMAD EVER+LK 
Sbjct: 418  GLLQKIPEVAYEDDTDNIPSPPDVSNYLVSEDDASAVNGNRDQLSFDGMADAEVERQLKV 477

Query: 1848 -------DAISSSSMTTTLDPRQVVSLQPAVVSMLSTILKQTPQVMPVQNKIFPVAVSMV 1690
                      SSSS   T  P  + S QP           Q   + P  N  FP     V
Sbjct: 478  FRCSLQYTIASSSSSMPTSQPSMLASQQPMPALQPPKPPSQL-SMTPFPNTQFPQVAPSV 536

Query: 1689 KPLGNVGSVEPRLQCSPATEEGEVPESELDPDMRRRLLIMQHGQDTRDQISSEXXXXXXX 1510
            K LG V   EP LQ SPA EEGEVPESELDPD RRRLLI+QHG D+RD   SE       
Sbjct: 537  KQLGQVVPPEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGHDSRDNAPSESPFPARP 596

Query: 1509 XXXXXXXPGNSRGIWPPLEENVCSRQLNQSVPKPVMRELPLESDTKHFDKHRNRHPPFSR 1330
                      S G W P+EE +  RQLN++      RE PL+SD  + +KHR  HP F  
Sbjct: 597  STQVSAPRVQSVGSWVPVEEEMSPRQLNRT-----PREFPLDSDPMNIEKHRTHHPSFFH 651

Query: 1329 GVESSISSDRYLHENQRLLKEAHRVDDRMRLNHSIPKKRTFPGEEMPMDPSVSNNE---- 1162
             VES+I SDR +HENQR  KEA   DDRM+LNHS     +F G E P+  S SN +    
Sbjct: 652  KVESNIPSDRMIHENQRQPKEATYRDDRMKLNHSTSNYPSFQG-ECPLSRSSSNRDLDLE 710

Query: 1161 --------EHPAGVLQKIARKCQTTVEFKTALISSTELQFSIEVWFTGEKIGEGIGRTRR 1006
                    E P  VLQ+IA KC T VEF+ ALI++++LQFSIE WF GEK+GEG G+TRR
Sbjct: 711  SERAFSSTETPVEVLQEIAMKCGTKVEFRPALIATSDLQFSIETWFVGEKVGEGTGKTRR 770

Query: 1005 EAQCQAAEHALRNLSNKYLANVLPDPVSAHGDLNKLHY--VKENGYLGDSISSGYQTAPK 832
            EAQ QAAE +++ L+ K         +S H D++   Y    +NG+LGD  S G Q   K
Sbjct: 771  EAQRQAAEGSIKKLAGK---------ISYH-DISYYSYPSANDNGFLGDMNSFGNQPLLK 820

Query: 831  ESFVPISSKPEPSRFLEPRLEEPKRLTSSVSILNEVCRGEGLAPVFQNHSPLPTNSIIEG 652
            +  +  S+  EPSR L+ RLE  K+   SV+ L E C  EGL   F   +PL TNSI   
Sbjct: 821  DENITYSATSEPSRLLDQRLEGSKKSMGSVTALKEFCMTEGLGVNFLAQTPLSTNSIPGE 880

Query: 651  EFHAQVEIGGQVLGKGVGSTWDEAKMRAADEALESSNYIIGQGAQNHAGSPRSFHDLSNK 472
            E HAQVEI GQVLGKG+G TWDEAKM+AA++AL S   + GQ      GSPR    + NK
Sbjct: 881  EVHAQVEIDGQVLGKGIGLTWDEAKMQAAEKALGSLRTMFGQYTPKRQGSPRLMQGMPNK 940

Query: 471  RQKVEFSRVLQRMPSSLKYSSNTSPV 394
            R K EF RVLQRMPSS +Y  N SPV
Sbjct: 941  RLKQEFPRVLQRMPSSARYHKNASPV 966


>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 954

 Score = 1093 bits (2827), Expect = 0.0
 Identities = 585/968 (60%), Positives = 712/968 (73%), Gaps = 26/968 (2%)
 Frame = -2

Query: 3219 MFKSVVYQGNSLLGEVEIYPKNQIIDTMMKNKDI--IRITHFSQQSERCPPLAVLHTIAP 3046
            M+KSVVYQG  ++GEV++YP+    +   KN  +  IRI+HFSQ SERCPPLAVLHT+  
Sbjct: 1    MYKSVVYQGEVVVGEVDVYPEE---NNNYKNFHVKEIRISHFSQPSERCPPLAVLHTVTS 57

Query: 3045 CGFCFKLEPTTNSQSEDSPLFSLHSSCLRENKTAVVPYGEEELHLVAMPSRRNVEHYSCF 2866
            CG CFK+E  T  Q     LF LHS C+RENKTAV+P G EE+HLVAM SR NV+   CF
Sbjct: 58   CGVCFKMESKTQQQDG---LFQLHSLCIRENKTAVMPLGGEEIHLVAMHSR-NVDR-PCF 112

Query: 2865 WGFIAAAGLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKLNTEMDPQR 2686
            WGFI A GLY+SCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRI+ALQRK+N+E+DPQR
Sbjct: 113  WGFIVALGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVDPQR 172

Query: 2685 VSGMLAEVKRYQDDKIILKQYVENDQVVENGKVIKVQSEMVPALSEDHQPIVRPIIRLRE 2506
            +SGM AEVKRYQDDK ILKQY ENDQVV+NG+VIKVQSE+VPALS+ HQPIVRP+IRL++
Sbjct: 173  ISGMQAEVKRYQDDKNILKQYAENDQVVDNGRVIKVQSEIVPALSDSHQPIVRPLIRLQD 232

Query: 2505 KNIVLTRINPLIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYVCTMAERDYALEMWRLL 2326
            KNI+LTRINP IRDTSVLVRLRPAWE+LRSYLTARGRKRFEVYVCTMAERDYALEMWRLL
Sbjct: 233  KNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLL 292

Query: 2325 DPESNLINSRELLDRIVCVKAGSRKSLLNVFHDGICHPKMALVIDDRLKVWDEKDQPRVH 2146
            DP+SNLINS+ELL RIVCVK+G +KSL NVF DG+CHPKMALVIDDRLKVWDEKDQPRVH
Sbjct: 293  DPDSNLINSKELLGRIVCVKSGLKKSLFNVFQDGLCHPKMALVIDDRLKVWDEKDQPRVH 352

Query: 2145 VVPAFAPYYAPQAEANNVTPVLCVARNVACNVRGGFFKEFDDGLLQKIFEVSYEDDLADF 1966
            VVPAFAPYYAPQAEA+N  PVLCVARNVACNVRGGFFK+FDDGLLQKI +++YEDD+ D 
Sbjct: 353  VVPAFAPYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDI 412

Query: 1965 PSAPDVSNYLISEDDTAASS--KDPLGFEGMADMEVERRLKDAISSSS----MTTTLDPR 1804
            PS PDVSNYL+SEDD + S+  +DP  F+GMAD EVER+LKDA+S++S     T  LDPR
Sbjct: 413  PSPPDVSNYLVSEDDGSISNGHRDPFLFDGMADAEVERKLKDALSAASTIPVTTANLDPR 472

Query: 1803 QVVSLQPAVVSMLSTILKQTPQ--VMPVQNKIFPVAVSMVKPLGNVGSVEPRLQCSPATE 1630
             + SLQ  +V    ++   T Q  +MP  +  FP   ++VKP+G     EP L  SPA E
Sbjct: 473  -LTSLQYTMVPS-GSVPPPTAQASMMPFPHVQFPQPATLVKPMGQAAPSEPSLHSSPARE 530

Query: 1629 EGEVPESELDPDMRRRLLIMQHGQDTRDQISSE-XXXXXXXXXXXXXXPGNSRGIWPPLE 1453
            EGEVPESELDPD RRRLLI+QHGQDTRD  S+E                 +SRG+W P E
Sbjct: 531  EGEVPESELDPDTRRRLLILQHGQDTRDHASAEPPFPVRHPVQTSAPHVPSSRGVWFPAE 590

Query: 1452 ENVCSRQLNQSVPKPVMRELPLESDTKHFDKHRNRHPPFSRGVESSISSDRYLHE-NQRL 1276
            E + S+ LN+ VPK    E P++S      K R  HP F   VESSISSDR LH+ +QRL
Sbjct: 591  EEIGSQPLNRVVPK----EFPVDSGPLGIAKPRPHHPSFFSKVESSISSDRILHDSHQRL 646

Query: 1275 LKEAHRVDDRMRLNHSIPKKRTFPGEEMPMDPSVSNNE-------------EHPAGVLQK 1135
             KE +  DDR RLNH +   R+F G+++P   S S++              + P  VLQ+
Sbjct: 647  PKEMYHRDDRPRLNHMLSSYRSFSGDDIPFSRSFSSHRDLDSESGHSVLHADTPVAVLQE 706

Query: 1134 IARKCQTTVEFKTALISSTELQFSIEVWFTGEKIGEGIGRTRREAQCQAAEHALRNLSNK 955
            IA KC T V+F ++L++STELQFS+E WF+G+KIG  +GRTR+EAQ +AAE ++++L++ 
Sbjct: 707  IALKCGTKVDFISSLVASTELQFSMEAWFSGKKIGHRVGRTRKEAQNKAAEDSIKHLADI 766

Query: 954  YLANVLPDPVSAHGDLNKLHYVKENGYLGDSISSGYQTAPKESFVPISSKPEPSRFLEPR 775
            YL++   +P S +GD++    V ++GY+G + S G Q   KE     S+   PSR L+PR
Sbjct: 767  YLSSAKDEPGSTYGDVSGFPNVNDSGYMGIASSLGNQPLSKEDSASFST-ASPSRVLDPR 825

Query: 774  LEEPKRLTSSVSILNEVCRGEGLAPVFQN-HSPLPTNSIIEGEFHAQVEIGGQVLGKGVG 598
            L+  KR   S+S L E+C  EGL   F +  +P+ TNS+ + E HAQVEI G+V GKG+G
Sbjct: 826  LDVSKRSMGSISSLKELCMMEGLDVNFLSAPAPVSTNSVQKDEVHAQVEIDGKVFGKGIG 885

Query: 597  STWDEAKMRAADEALESSNYIIGQGAQNHAGSPRSFHDLSNKRQKVEFSRVLQRMPSSLK 418
             TWDEAKM+AA++AL S    +GQ  Q    SPR     SNKR K E+ R +QRMPSS +
Sbjct: 886  LTWDEAKMQAAEKALGSLRSKLGQSIQKRQSSPRPHQGFSNKRLKQEYPRPMQRMPSSAR 945

Query: 417  YSSNTSPV 394
            Y  N  P+
Sbjct: 946  YPRNAPPI 953


>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
          Length = 894

 Score = 1089 bits (2817), Expect = 0.0
 Identities = 582/947 (61%), Positives = 694/947 (73%), Gaps = 5/947 (0%)
 Frame = -2

Query: 3219 MFKSVVYQGNSLLGEVEIYPKNQIIDTMMKNKDIIRITHFSQQSERCPPLAVLHTIAPCG 3040
            M+KS+VY+G+ ++GEVEIYP+NQ ++ M +    IRI+H+SQ SERCPPLAVLHTI  CG
Sbjct: 1    MYKSIVYEGDDVVGEVEIYPQNQGLELMKE----IRISHYSQPSERCPPLAVLHTITSCG 56

Query: 3039 FCFKLEPTTNSQSEDSPLFSLHSSCLRENKTAVVPYGEEELHLVAMPSRRNVEHYSCFWG 2860
             CFK+E ++ +QS+D+PL+ LHS+C+RENKTAV+  GEEELHLVAM S++    Y CFWG
Sbjct: 57   VCFKME-SSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWG 115

Query: 2859 FIAAAGLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKLNTEMDPQRVS 2680
            F  A GLY+SCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRI+ALQRK+NTE+DPQR+S
Sbjct: 116  FNVALGLYSSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINTEVDPQRIS 175

Query: 2679 GMLAEVKRYQDDKIILKQYVENDQVVENGKVIKVQSEMVPALSEDHQPIVRPIIRLREKN 2500
            GM+AEV                   VENGK+ K Q E+VPALS++HQPIVRP+IRL+EKN
Sbjct: 176  GMVAEV-------------------VENGKLFKTQPEIVPALSDNHQPIVRPLIRLQEKN 216

Query: 2499 IVLTRINPLIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 2320
            I+LTRINPLIRDTSVLVRLRPAWE+LRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP
Sbjct: 217  IILTRINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 276

Query: 2319 ESNLINSRELLDRIVCVKAGSRKSLLNVFHDGICHPKMALVIDDRLKVWDEKDQPRVHVV 2140
            ESNLINS+ELLDRIVCVK+GSRKSL NVF DGICHPKMALVIDDRLKVWDEKDQPRVHVV
Sbjct: 277  ESNLINSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVV 336

Query: 2139 PAFAPYYAPQAEANNVTPVLCVARNVACNVRGGFFKEFDDGLLQKIFEVSYEDDLADFPS 1960
            PAFAPYYAPQAEANN   VLCVARNVACNVRGGFFKEFD+GLLQ+I E+SYED++ D  S
Sbjct: 337  PAFAPYYAPQAEANNAISVLCVARNVACNVRGGFFKEFDEGLLQRIPEISYEDBIKDIRS 396

Query: 1959 APDVSNYLISEDDTAAS--SKDPLGFEGMADMEVERRLKDAISSSSMTTTLDPRQVVSLQ 1786
            APDVSNYL+SEDD + S  ++D   F+GMAD+EVER+LKDAIS+ S  T+LDPR    LQ
Sbjct: 397  APDVSNYLVSEDDASVSNGNRDQPCFDGMADVEVERKLKDAISAPSTVTSLDPRLSPPLQ 456

Query: 1785 PAVVSMLSTILKQTPQ--VMPVQNKIFPVAVSMVKPLGNVGSVEPRLQCSPATEEGEVPE 1612
             AV +      +   Q  +MP  NK FP + S++KPL    + EP +Q SPA EEGEVPE
Sbjct: 457  FAVAASSGLAPQPAAQGSIMPFSNKQFPQSASLIKPL----APEPTMQSSPAREEGEVPE 512

Query: 1611 SELDPDMRRRLLIMQHGQDTRDQISSEXXXXXXXXXXXXXXPGNSRGIWPPLEENVCSRQ 1432
            SELDPD RRRLLI+QHGQDTR+  SS+                 SRG W P +E +  RQ
Sbjct: 513  SELDPDTRRRLLILQHGQDTREHASSDPPFPVRPPIQVSVPRVQSRGSWFPADEEMSPRQ 572

Query: 1431 LNQSVPKPVMRELPLESDTKHFDKHRNRHPPFSRGVESSISSDRYLHENQRLLKEAHRVD 1252
            LN++VPK    E PL+SDT H +KHR  HP F   VESS SSDR LHENQRL KE    D
Sbjct: 573  LNRAVPK----EFPLDSDTMHIEKHRPHHPSFFHKVESSASSDRILHENQRLSKEVLHRD 628

Query: 1251 DRMRLNHSIPKKRTFPGEEMPMDPSVSNNE-EHPAGVLQKIARKCQTTVEFKTALISSTE 1075
            DR+RLNHS+P   +F GEE+P+  S SN + +  +G   + A   +T       L+ +  
Sbjct: 629  DRLRLNHSLPGYHSFSGEEVPLGRSSSNRDLDFESG---RGAPYAETPA---VGLLRNCN 682

Query: 1074 LQFSIEVWFTGEKIGEGIGRTRREAQCQAAEHALRNLSNKYLANVLPDPVSAHGDLNKLH 895
                 EVW  GEKIGEG G+TRREAQCQAAE +L  LS +YL          HGD+N+  
Sbjct: 683  -----EVWNQGEKIGEGTGKTRREAQCQAAEASLMYLSYRYL----------HGDVNRFP 727

Query: 894  YVKENGYLGDSISSGYQTAPKESFVPISSKPEPSRFLEPRLEEPKRLTSSVSILNEVCRG 715
               +N ++ D+ S GYQ+ PKE  +  S+  E SR L+PRLE  K+   S+S L E+C  
Sbjct: 728  NASDNNFMSDTNSFGYQSFPKEGSMSFSTASESSRLLDPRLESSKKSMGSISALKELCMM 787

Query: 714  EGLAPVFQNHSPLPTNSIIEGEFHAQVEIGGQVLGKGVGSTWDEAKMRAADEALESSNYI 535
            EGL   F +  PL +NS  + E  AQVEI GQVLGKG GSTWD+AKM+AA++AL S   +
Sbjct: 788  EGLGVEFLSQPPLSSNSTQKEEICAQVEIDGQVLGKGTGSTWDDAKMQAAEKALGSLKSM 847

Query: 534  IGQGAQNHAGSPRSFHDLSNKRQKVEFSRVLQRMPSSLKYSSNTSPV 394
            +GQ +Q   GSPRS   +  KR K EF+R LQR PSS +YS NTSPV
Sbjct: 848  LGQFSQKRQGSPRSLQGM-GKRLKSEFTRGLQRTPSSGRYSKNTSPV 893


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 960

 Score = 1081 bits (2796), Expect = 0.0
 Identities = 576/971 (59%), Positives = 706/971 (72%), Gaps = 29/971 (2%)
 Frame = -2

Query: 3219 MFKSVVYQGNSLLGEVEIYPK-NQIIDTMMKNKDI----IRITHFSQQSERCPPLAVLHT 3055
            M+KSVVYQG  ++GEV++YP+ N   +    NK+     IRI+HFSQ SERCPPLAVLHT
Sbjct: 1    MYKSVVYQGEVVVGEVDVYPEENNNNNNKNYNKNFHVKEIRISHFSQPSERCPPLAVLHT 60

Query: 3054 IAPCGFCFKLEPTTNSQSEDSPLFSLHSSCLRENKTAVVPYGEEELHLVAMPSRRNVEHY 2875
            +  CG CFK+E  T  Q     LF LHS C+RENKTAV+P G EE+HLVAM SR   +  
Sbjct: 61   VTSCGVCFKMESKTQQQDG---LFQLHSLCIRENKTAVMPLGGEEIHLVAMHSRN--DDR 115

Query: 2874 SCFWGFIAAAGLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKLNTEMD 2695
             CFWGFI   GLY+SCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRI+ALQRK+N+E+D
Sbjct: 116  PCFWGFIVTLGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVD 175

Query: 2694 PQRVSGMLAEVKRYQDDKIILKQYVENDQVVENGKVIKVQSEMVPALSEDHQPIVRPIIR 2515
            PQR+SGM AEVKRY DDK ILKQY ENDQVV+NG+VIKVQSE+VPALS+ HQPIVRP+IR
Sbjct: 176  PQRISGMQAEVKRYLDDKNILKQYAENDQVVDNGRVIKVQSEIVPALSDSHQPIVRPLIR 235

Query: 2514 LREKNIVLTRINPLIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYVCTMAERDYALEMW 2335
            L++KNI+LTRINP IRDTSVLVRLRPAWE+LRSYLTARGRKRFEVYVCTMAERDYALEMW
Sbjct: 236  LQDKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMW 295

Query: 2334 RLLDPESNLINSRELLDRIVCVKAGSRKSLLNVFHDGICHPKMALVIDDRLKVWDEKDQP 2155
            RLLDP+SNLINS+ELL RIVCVK+G +KSL NVF DG C PKMALVIDDRLKVWDE+DQP
Sbjct: 296  RLLDPDSNLINSKELLGRIVCVKSGLKKSLFNVFQDGSCDPKMALVIDDRLKVWDERDQP 355

Query: 2154 RVHVVPAFAPYYAPQAEANNVTPVLCVARNVACNVRGGFFKEFDDGLLQKIFEVSYEDDL 1975
            RVHVVPAFAPYYAPQAEA+N  PVLCVARNVACNVRGGFFK+FDDGLLQKI +++YEDD+
Sbjct: 356  RVHVVPAFAPYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDI 415

Query: 1974 ADFPSAPDVSNYLISEDDTAAS--SKDPLGFEGMADMEVERRLKDAISSSS----MTTTL 1813
             D PS PDVSNYL+SEDD + S  ++DP  F+GMAD EVER+LKDA++++S     T  L
Sbjct: 416  KDVPSPPDVSNYLVSEDDGSISNGNRDPFLFDGMADAEVERKLKDALAAASTFPVTTANL 475

Query: 1812 DPRQVVSLQPAVVSMLSTILKQTPQ--VMPVQNKIFPVAVSMVKPLGNVGSVEPRLQCSP 1639
            DPR + SLQ  +V    ++   T Q  +MP  +  FP   ++VKP+G     +P L  SP
Sbjct: 476  DPR-LTSLQYTMVPS-GSVPPPTAQASMMPFPHVQFPQPATLVKPMGQAAPSDPSLHSSP 533

Query: 1638 ATEEGEVPESELDPDMRRRLLIMQHGQDTRDQISSE-XXXXXXXXXXXXXXPGNSRGIWP 1462
            A EEGEVPESELDPD RRRLLI+QHGQDTRD  S+E                 +SRG+W 
Sbjct: 534  AREEGEVPESELDPDTRRRLLILQHGQDTRDHASAEPPFPVRHPVQASAPRVPSSRGVWF 593

Query: 1461 PLEENVCSRQLNQSVPKPVMRELPLESDTKHFDKHRNRHPPFSRGVESSISSDRYLHE-N 1285
            P+EE + S+ LN+ VPK    E P++S     +K R  HP F   VESSISSDR LH+ +
Sbjct: 594  PVEEEIGSQPLNRVVPK----EFPVDSGPLGIEKPRLHHPSFFNKVESSISSDRILHDSH 649

Query: 1284 QRLLKEAHRVDDRMRLNHSIPKKRTFPGEEMPMDPSVSNNE-------------EHPAGV 1144
            QRL KE +  DDR RLNH +   R+F G+++P   S S++              + P  V
Sbjct: 650  QRLPKEMYHRDDRPRLNHMLSSYRSFSGDDIPFSRSSSSHRDLDSESGHSVLHADTPVAV 709

Query: 1143 LQKIARKCQTTVEFKTALISSTELQFSIEVWFTGEKIGEGIGRTRREAQCQAAEHALRNL 964
            L +IA KC T V+F ++L++STEL+FS+E WF+G+KIG G GRTR+EAQ +AA+ ++ +L
Sbjct: 710  LHEIALKCGTKVDFMSSLVASTELKFSLEAWFSGKKIGHGFGRTRKEAQNKAAKDSIEHL 769

Query: 963  SNKYLANVLPDPVSAHGDLNKLHYVKENGYLGDSISSGYQTAPKESFVPISSKPEPSRFL 784
            ++ YL++   +P S +GD++    V +NGY+G + S G Q   KE     SS   PSR L
Sbjct: 770  ADIYLSSAKDEPGSTYGDVSGFPNVNDNGYMGIASSLGNQPLSKEDSASFSS-ASPSRAL 828

Query: 783  EPRLEEPKRLTSSVSILNEVCRGEGLAPVF-QNHSPLPTNSIIEGEFHAQVEIGGQVLGK 607
            +PRL+  KR   S+S L E+C  EGL   F    +P+ TNS+ + E HAQVEI G++ GK
Sbjct: 829  DPRLDVSKRSMGSISALKELCMMEGLGVNFLSTPAPVSTNSVQKDEVHAQVEIDGKIFGK 888

Query: 606  GVGSTWDEAKMRAADEALESSNYIIGQGAQNHAGSPRSFHDLSNKRQKVEFSRVLQRMPS 427
            G+G TWDEAKM+AA++AL +    +GQ  Q    SPR     SNKR K E+ R +QRMPS
Sbjct: 889  GIGLTWDEAKMQAAEKALGNLRSKLGQSIQKMQSSPRPHQGFSNKRLKQEYPRTMQRMPS 948

Query: 426  SLKYSSNTSPV 394
            S +Y  N  P+
Sbjct: 949  SARYPRNAPPI 959