BLASTX nr result

ID: Cimicifuga21_contig00004095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004095
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275297.1| PREDICTED: 60S ribosomal protein L10 isoform...   437   e-120
ref|XP_002264609.1| PREDICTED: 60S ribosomal protein L10 [Vitis ...   436   e-120
ref|XP_002524357.1| 60S ribosomal protein L10, putative [Ricinus...   432   e-119
sp|Q9SPB3.1|RL10_VITRI RecName: Full=60S ribosomal protein L10; ...   432   e-119
gb|AFK38655.1| unknown [Lotus japonicus]                              432   e-119

>ref|XP_002275297.1| PREDICTED: 60S ribosomal protein L10 isoform 2 [Vitis vinifera]
           gi|225425354|ref|XP_002275270.1| PREDICTED: 60S
           ribosomal protein L10 isoform 1 [Vitis vinifera]
          Length = 224

 Score =  437 bits (1123), Expect = e-120
 Identities = 208/216 (96%), Positives = 210/216 (97%)
 Frame = +3

Query: 60  MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 239
           MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 240 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 419
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 420 KPLGTCARVSIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFGRSD 599
           KP GTCARV+IGQVLLSVRCKD NG HAQEALRRAKFKFPGRQKIIVSRKWGFTKF R+D
Sbjct: 121 KPQGTCARVNIGQVLLSVRCKDGNGNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 600 YVKWKAENRIMPDGVNAKLLGCHGPLANRQPGRAFL 707
           YVKWK ENRIMPDGVNAKLLGCHGPLA RQPGRAFL
Sbjct: 181 YVKWKQENRIMPDGVNAKLLGCHGPLAQRQPGRAFL 216


>ref|XP_002264609.1| PREDICTED: 60S ribosomal protein L10 [Vitis vinifera]
           gi|297745742|emb|CBI15798.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  436 bits (1121), Expect = e-120
 Identities = 205/218 (94%), Positives = 213/218 (97%)
 Frame = +3

Query: 60  MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 239
           MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 240 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 419
           SSEALEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 420 KPLGTCARVSIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFGRSD 599
           KP GTCARVSIGQVLLSVRCKD N  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF R+D
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTD 180

Query: 600 YVKWKAENRIMPDGVNAKLLGCHGPLANRQPGRAFLDA 713
           Y+KWK+ENRI+PDGVNAKLLGCHGPLANRQPG+AF++A
Sbjct: 181 YIKWKSENRILPDGVNAKLLGCHGPLANRQPGKAFINA 218


>ref|XP_002524357.1| 60S ribosomal protein L10, putative [Ricinus communis]
           gi|223536448|gb|EEF38097.1| 60S ribosomal protein L10,
           putative [Ricinus communis]
          Length = 220

 Score =  432 bits (1112), Expect = e-119
 Identities = 207/218 (94%), Positives = 211/218 (96%)
 Frame = +3

Query: 60  MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 239
           MGRRPARCYRQIKNKPYPKSRYCRGVPD KIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDSKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 240 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 419
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 420 KPLGTCARVSIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFGRSD 599
           KP GTCARV+IGQVLLSVRCKDNN  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF R+D
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDNNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRND 180

Query: 600 YVKWKAENRIMPDGVNAKLLGCHGPLANRQPGRAFLDA 713
           YVK K+ENRIMPDGVNAKLLGCHGPLANRQPGRAFLDA
Sbjct: 181 YVKLKSENRIMPDGVNAKLLGCHGPLANRQPGRAFLDA 218


>sp|Q9SPB3.1|RL10_VITRI RecName: Full=60S ribosomal protein L10; AltName: Full=QM protein
           homolog gi|5917743|gb|AAD56018.1|AF180758_1 60S
           ribosomal protein L10 [Vitis riparia]
          Length = 220

 Score =  432 bits (1112), Expect = e-119
 Identities = 203/218 (93%), Positives = 212/218 (97%)
 Frame = +3

Query: 60  MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 239
           MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 240 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 419
           SSEALEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 420 KPLGTCARVSIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFGRSD 599
           KP GTCARVSIGQVLLSVRCKD N  HAQEALRRAKFKFP RQKIIVSRKWGFTKF R+D
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTD 180

Query: 600 YVKWKAENRIMPDGVNAKLLGCHGPLANRQPGRAFLDA 713
           Y+KWK++NRI+PDGVNAKLLGCHGPLANRQPG+AF++A
Sbjct: 181 YIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFINA 218


>gb|AFK38655.1| unknown [Lotus japonicus]
          Length = 223

 Score =  432 bits (1110), Expect = e-119
 Identities = 204/218 (93%), Positives = 213/218 (97%)
 Frame = +3

Query: 60  MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 239
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 240 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 419
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 420 KPLGTCARVSIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFGRSD 599
           KP GTCARV+IGQVLLSVRCKD+N  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF R+D
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180

Query: 600 YVKWKAENRIMPDGVNAKLLGCHGPLANRQPGRAFLDA 713
           Y+K+K+ENRI+PDGVNAKLLGCHGPLANRQPGRAF+DA
Sbjct: 181 YLKYKSENRILPDGVNAKLLGCHGPLANRQPGRAFIDA 218


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