BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004081
         (1905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplast...   716   0.0  
ref|XP_002298064.1| predicted protein [Populus trichocarpa] gi|2...   714   0.0  
ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplast...   713   0.0  
sp|Q40450.2|EFTUA_NICSY RecName: Full=Elongation factor TuA, chl...   713   0.0  
ref|XP_002863558.1| chloroplast elongation factor tub [Arabidops...   707   0.0  

>ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplastic-like [Vitis vinifera]
          Length = 486

 Score =  716 bits (1847), Expect = 0.0
 Identities = 362/432 (83%), Positives = 383/432 (88%)
 Frame = -2

Query: 1622 FWLTATNTPETRRTHHQRSFTVRAARGKFERKKPHVNIGTIGHVDHGKXXXXXXXXXXXA 1443
            F LT T T  T +   +RSFTVRAARGKFER KPH+NIGTIGHVDHGK           A
Sbjct: 58   FLLTPTTTATTTQ---RRSFTVRAARGKFERNKPHLNIGTIGHVDHGKTTLTAALTMALA 114

Query: 1442 SMGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA 1263
            +MGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA
Sbjct: 115  AMGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA 174

Query: 1262 QMDGAILVCSGADGPMPQTKEHILLAKQVGVPSMVVFLNKQDQVDDXXXXXXXXXXXXXX 1083
            QMDGAILV SGADGPMPQTKEHILLAKQVGVP+MVVFLNKQDQVDD              
Sbjct: 175  QMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVREL 234

Query: 1082 LSSYEFPGDDIPIVSGSXXXXXXXXXENPKIKRGENEWVDKIYQLMDSVDSYIPIPTRQT 903
            LSSYEFPGDD+PI+SGS          NP IKRGEN+WVDKIY+LMDSVDSYIPIP RQT
Sbjct: 235  LSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQT 294

Query: 902  ELPFLLAVEDVFSITGRGTVATGRVERGTVRVGETVDLVGLRETRNTTVTGVEMFQKILD 723
            +LPFLLA+EDVFSITGRGTVATGRVERGT++VGETVD+VGL++TR+TTVTGVEMFQKILD
Sbjct: 295  DLPFLLAIEDVFSITGRGTVATGRVERGTIKVGETVDIVGLKDTRSTTVTGVEMFQKILD 354

Query: 722  EALAGDNVGILLRGIQKADIQRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGY 543
            EALAGDNVGILLRG+QKADIQRGMVLAKPG+ITPHTKF AIVYVLKKEEGGRHSPFFAGY
Sbjct: 355  EALAGDNVGILLRGVQKADIQRGMVLAKPGTITPHTKFAAIVYVLKKEEGGRHSPFFAGY 414

Query: 542  RPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGK 363
            RPQFYMRTTDVTG+V+SIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGK
Sbjct: 415  RPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGK 474

Query: 362  TVGAGVIQSIIE 327
            TVGAGVIQSIIE
Sbjct: 475  TVGAGVIQSIIE 486


>ref|XP_002298064.1| predicted protein [Populus trichocarpa] gi|222845322|gb|EEE82869.1|
            predicted protein [Populus trichocarpa]
          Length = 483

 Score =  714 bits (1842), Expect = 0.0
 Identities = 362/432 (83%), Positives = 383/432 (88%)
 Frame = -2

Query: 1622 FWLTATNTPETRRTHHQRSFTVRAARGKFERKKPHVNIGTIGHVDHGKXXXXXXXXXXXA 1443
            F  T+  +P T   H  R+FTVRAARGKFERKKPHVNIGTIGHVDHGK           A
Sbjct: 54   FTPTSPTSPFTTTRH--RTFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALA 111

Query: 1442 SMGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA 1263
            SMG SAPKKYDEIDAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAA
Sbjct: 112  SMGGSAPKKYDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAA 171

Query: 1262 QMDGAILVCSGADGPMPQTKEHILLAKQVGVPSMVVFLNKQDQVDDXXXXXXXXXXXXXX 1083
            QMDGAILV SGADGPMPQTKEHILLAKQVGVP+MVVFLNKQDQVDD              
Sbjct: 172  QMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVREL 231

Query: 1082 LSSYEFPGDDIPIVSGSXXXXXXXXXENPKIKRGENEWVDKIYQLMDSVDSYIPIPTRQT 903
            LSSYEFPGDDIPI+SGS         ENP IKRGEN+WVDKIY+LMD+VD+YIPIP RQT
Sbjct: 232  LSSYEFPGDDIPIISGSALLALEALMENPAIKRGENQWVDKIYELMDNVDNYIPIPQRQT 291

Query: 902  ELPFLLAVEDVFSITGRGTVATGRVERGTVRVGETVDLVGLRETRNTTVTGVEMFQKILD 723
            +LPFLLAVEDVFSITGRGTVATGRVERGT+R G+TVD+VGLRETRNTTVTGVEMFQKILD
Sbjct: 292  DLPFLLAVEDVFSITGRGTVATGRVERGTIRTGDTVDIVGLRETRNTTVTGVEMFQKILD 351

Query: 722  EALAGDNVGILLRGIQKADIQRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGY 543
            EALAGDNVG+LLRG+QKADIQRGMVL+KPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGY
Sbjct: 352  EALAGDNVGLLLRGVQKADIQRGMVLSKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGY 411

Query: 542  RPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGK 363
            RPQFYMRTTDVTGRV++IMNDKDEESKMVMPGDRVKM+VELIMPVACEQGMRFAIREGGK
Sbjct: 412  RPQFYMRTTDVTGRVATIMNDKDEESKMVMPGDRVKMIVELIMPVACEQGMRFAIREGGK 471

Query: 362  TVGAGVIQSIIE 327
            TVGAGVIQ+IIE
Sbjct: 472  TVGAGVIQAIIE 483


>ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform 1 [Vitis
            vinifera] gi|359488736|ref|XP_003633809.1| PREDICTED:
            elongation factor Tu, chloroplastic-like isoform 2 [Vitis
            vinifera] gi|359488738|ref|XP_003633810.1| PREDICTED:
            elongation factor Tu, chloroplastic-like isoform 3 [Vitis
            vinifera]
          Length = 487

 Score =  713 bits (1840), Expect = 0.0
 Identities = 363/434 (83%), Positives = 382/434 (88%), Gaps = 1/434 (0%)
 Frame = -2

Query: 1625 VFWLTATNTPETRRT-HHQRSFTVRAARGKFERKKPHVNIGTIGHVDHGKXXXXXXXXXX 1449
            +F  +  ++P T  +   +RS TVRAARGKFERKKPHVNIGTIGHVDHGK          
Sbjct: 54   IFRYSVLSSPSTGSSPFRRRSLTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMA 113

Query: 1448 XASMGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITG 1269
             ASMGNSAPKKYDEIDAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITG
Sbjct: 114  LASMGNSAPKKYDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITG 173

Query: 1268 AAQMDGAILVCSGADGPMPQTKEHILLAKQVGVPSMVVFLNKQDQVDDXXXXXXXXXXXX 1089
            AAQMDGAILV SGADGPMPQTKEHILLAKQVGVP+MVVFLNKQDQVDD            
Sbjct: 174  AAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVR 233

Query: 1088 XXLSSYEFPGDDIPIVSGSXXXXXXXXXENPKIKRGENEWVDKIYQLMDSVDSYIPIPTR 909
              L+SYEFPGDDIPIVSGS          NP IKRGENEWVDKIY+LMD+VDSYIPIP R
Sbjct: 234  ELLASYEFPGDDIPIVSGSALLALEALMANPSIKRGENEWVDKIYELMDAVDSYIPIPQR 293

Query: 908  QTELPFLLAVEDVFSITGRGTVATGRVERGTVRVGETVDLVGLRETRNTTVTGVEMFQKI 729
            QT+LPFLLAVEDVFSITGRGTVATGRVERGT++VGETVDLVGLRETR TTVTGVEMFQKI
Sbjct: 294  QTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLRETRATTVTGVEMFQKI 353

Query: 728  LDEALAGDNVGILLRGIQKADIQRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFA 549
            LDEALAGDNVG+LLRGIQKADIQRGMVLAKPG+ITPHTKF AIVY+LKKEEGGRHSPFFA
Sbjct: 354  LDEALAGDNVGLLLRGIQKADIQRGMVLAKPGTITPHTKFSAIVYILKKEEGGRHSPFFA 413

Query: 548  GYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREG 369
            GYRPQFYMRTTDVTG+V+ IMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREG
Sbjct: 414  GYRPQFYMRTTDVTGKVAQIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREG 473

Query: 368  GKTVGAGVIQSIIE 327
            GKTVGAGVIQSIIE
Sbjct: 474  GKTVGAGVIQSIIE 487


>sp|Q40450.2|EFTUA_NICSY RecName: Full=Elongation factor TuA, chloroplastic; Short=EF-TuA;
            Flags: Precursor gi|68566318|sp|P68158.1|EFTU_TOBAC
            RecName: Full=Elongation factor Tu, chloroplastic;
            Short=EF-Tu; Flags: Precursor gi|170344|gb|AAA18546.1|
            translation elongation factor EF-Tu [Nicotiana tabacum]
            gi|459239|dbj|BAA02027.1| chloroplast elongation factor
            TuA(EF-TuA) [Nicotiana sylvestris]
          Length = 478

 Score =  713 bits (1840), Expect = 0.0
 Identities = 356/431 (82%), Positives = 379/431 (87%)
 Frame = -2

Query: 1619 WLTATNTPETRRTHHQRSFTVRAARGKFERKKPHVNIGTIGHVDHGKXXXXXXXXXXXAS 1440
            +L +  TP +  TH  R FTVRAARGKFERKKPHVNIGTIGHVDHGK           AS
Sbjct: 48   FLHSPATPSSTATHRHRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALAS 107

Query: 1439 MGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQ 1260
            MGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQ
Sbjct: 108  MGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQ 167

Query: 1259 MDGAILVCSGADGPMPQTKEHILLAKQVGVPSMVVFLNKQDQVDDXXXXXXXXXXXXXXL 1080
            MDGAILVCSGADGPMPQTKEHILLAKQVGVP+MVVFLNKQDQVDD              L
Sbjct: 168  MDGAILVCSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELL 227

Query: 1079 SSYEFPGDDIPIVSGSXXXXXXXXXENPKIKRGENEWVDKIYQLMDSVDSYIPIPTRQTE 900
            SSYEFPGDDIPI+SGS          NP IKRGEN+WVDKIY+LMD+VDSYIPIP RQTE
Sbjct: 228  SSYEFPGDDIPIISGSALLALEALMANPSIKRGENQWVDKIYELMDAVDSYIPIPVRQTE 287

Query: 899  LPFLLAVEDVFSITGRGTVATGRVERGTVRVGETVDLVGLRETRNTTVTGVEMFQKILDE 720
            LPFL+A+EDVFSITGRGTVATGRVERGTVR+G+TVD+VGL++TR+TTVTGVEMFQKILDE
Sbjct: 288  LPFLMAIEDVFSITGRGTVATGRVERGTVRIGDTVDIVGLKDTRSTTVTGVEMFQKILDE 347

Query: 719  ALAGDNVGILLRGIQKADIQRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYR 540
            A+AGDNVG+LLRGIQK DIQRGMVLAKPG+ITPHTKFEAIVYVLKKEEGGRHSPFF+GYR
Sbjct: 348  AMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYR 407

Query: 539  PQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKT 360
            PQFYMRTTDVTG+V+SI  DK EESKMVMPGDRV +VVELIMPVACEQGMRFAIREGGKT
Sbjct: 408  PQFYMRTTDVTGKVTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKT 467

Query: 359  VGAGVIQSIIE 327
            VGAGVIQ IIE
Sbjct: 468  VGAGVIQKIIE 478


>ref|XP_002863558.1| chloroplast elongation factor tub [Arabidopsis lyrata subsp. lyrata]
            gi|297309393|gb|EFH39817.1| chloroplast elongation factor
            tub [Arabidopsis lyrata subsp. lyrata]
          Length = 478

 Score =  707 bits (1826), Expect = 0.0
 Identities = 362/432 (83%), Positives = 380/432 (87%), Gaps = 2/432 (0%)
 Frame = -2

Query: 1616 LTATNTPETRRTHHQ--RSFTVRAARGKFERKKPHVNIGTIGHVDHGKXXXXXXXXXXXA 1443
            +T T T  T  + H+  R+FTVRAARGKFERKKPHVNIGTIGHVDHGK           A
Sbjct: 47   ITTTTTTTTSSSPHRLRRAFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALA 106

Query: 1442 SMGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA 1263
            S+GNS  KKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA
Sbjct: 107  SVGNSVAKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA 166

Query: 1262 QMDGAILVCSGADGPMPQTKEHILLAKQVGVPSMVVFLNKQDQVDDXXXXXXXXXXXXXX 1083
            QMDGAILV SGADGPMPQTKEHILLAKQVGVP MVVFLNK+DQVDD              
Sbjct: 167  QMDGAILVVSGADGPMPQTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVREL 226

Query: 1082 LSSYEFPGDDIPIVSGSXXXXXXXXXENPKIKRGENEWVDKIYQLMDSVDSYIPIPTRQT 903
            LSSYEF GDDIPI+SGS         E P +KRGEN+WVDKIY+LMDSVDSYIPIPTRQT
Sbjct: 227  LSSYEFNGDDIPIISGSALLAVETLTEKPNVKRGENKWVDKIYELMDSVDSYIPIPTRQT 286

Query: 902  ELPFLLAVEDVFSITGRGTVATGRVERGTVRVGETVDLVGLRETRNTTVTGVEMFQKILD 723
            ELPFLLAVEDVFSITGRGTVATGRVERG V+VGETVDLVGLRETRN TVTGVEMFQKILD
Sbjct: 287  ELPFLLAVEDVFSITGRGTVATGRVERGCVKVGETVDLVGLRETRNYTVTGVEMFQKILD 346

Query: 722  EALAGDNVGILLRGIQKADIQRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGY 543
            EA+AGDNVG+LLRGIQKADIQRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGY
Sbjct: 347  EAMAGDNVGLLLRGIQKADIQRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGY 406

Query: 542  RPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGK 363
            RPQFYMRTTDVTG+V++IMNDKDEESKMVMPGDRVK+VVELI+PVACEQGMRFAIREGGK
Sbjct: 407  RPQFYMRTTDVTGKVTNIMNDKDEESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGK 466

Query: 362  TVGAGVIQSIIE 327
            TVGAGVIQSIIE
Sbjct: 467  TVGAGVIQSIIE 478