BLASTX nr result

ID: Cimicifuga21_contig00004072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004072
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310782.1| predicted protein [Populus trichocarpa] gi|2...   202   6e-50
ref|XP_002533269.1| conserved hypothetical protein [Ricinus comm...   201   2e-49
ref|XP_002269123.1| PREDICTED: uncharacterized protein LOC100251...   200   3e-49
ref|XP_004164470.1| PREDICTED: pentatricopeptide repeat-containi...   193   4e-47
ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containi...   193   4e-47

>ref|XP_002310782.1| predicted protein [Populus trichocarpa] gi|222853685|gb|EEE91232.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  202 bits (515), Expect = 6e-50
 Identities = 92/137 (67%), Positives = 116/137 (84%)
 Frame = -1

Query: 583 QVTKAIEGVITLSLAQSSDPRRKELENMEKEKALIDKQAGVLVRMELWAGLGLFVVQTAG 404
           QV KAI G+I L     +DPRRKEL+ MEK+KA+ID++AG LVR ELW GLG  ++QTAG
Sbjct: 187 QVLKAIGGLIPLPATDPNDPRRKELQEMEKQKAVIDQKAGTLVRRELWCGLGFLILQTAG 246

Query: 403 FMRLTFWELSWDVMEPICFYFTSMYFVAGYSFFLRTSREPSFEGFYKSRLNAKKQRLMKK 224
           FMRLTFWEL+WDVMEPICFY TS YFVAGY+FFLRTS+EPSFEGFY+SR +AK+++LMK 
Sbjct: 247 FMRLTFWELTWDVMEPICFYVTSFYFVAGYTFFLRTSKEPSFEGFYQSRFSAKQKQLMKL 306

Query: 223 KEFDVQRFNELRRACYP 173
             F+++R++ELR+ C+P
Sbjct: 307 NNFNMERYDELRKICHP 323


>ref|XP_002533269.1| conserved hypothetical protein [Ricinus communis]
           gi|223526894|gb|EEF29101.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 346

 Score =  201 bits (511), Expect = 2e-49
 Identities = 97/148 (65%), Positives = 115/148 (77%), Gaps = 4/148 (2%)
 Frame = -1

Query: 583 QVTKAIEGVITLSLAQSSDPRRKELENMEKEKALIDKQAGVLVRMELWAGLGLFVVQTAG 404
           QV KAI G+I L     +DPRRKELE MEK+K +ID++A  LVR ELW GLG  VVQTA 
Sbjct: 195 QVVKAIGGLIPLPATNPNDPRRKELEEMEKKKVVIDRKADTLVRRELWCGLGYLVVQTAA 254

Query: 403 FMRLTFWELSWDVMEPICFYFTSMYFVAGYSFFLRTSREPSFEGFYKSRLNAKKQRLMKK 224
           FMRLTFWEL+WDVMEPICFY TSMY +AGY+FFLRTS+EPSFEGFY+SR NAK+QRLMK 
Sbjct: 255 FMRLTFWELTWDVMEPICFYVTSMYCMAGYAFFLRTSKEPSFEGFYQSRFNAKQQRLMKL 314

Query: 223 KEFDVQRFNELRRACYP----FSAEPPS 152
             FD +R+ +L + CYP    FS + P+
Sbjct: 315 HNFDAKRYQQLLKICYPQPASFSGQVPA 342


>ref|XP_002269123.1| PREDICTED: uncharacterized protein LOC100251398 [Vitis vinifera]
           gi|297735214|emb|CBI17576.3| unnamed protein product
           [Vitis vinifera]
          Length = 350

 Score =  200 bits (509), Expect = 3e-49
 Identities = 96/147 (65%), Positives = 121/147 (82%), Gaps = 2/147 (1%)
 Frame = -1

Query: 583 QVTKAIEGVITLSLAQSSDPRRKELENMEKEKALIDKQAGVLVRMELWAGLGLFVVQTAG 404
           QV KAI+G+I + ++  +D R++ELE ME++K +IDK+A  LVR ELW GLG F+VQT G
Sbjct: 186 QVAKAIQGLIPMPVSFQNDERKEELEGMERQKVVIDKEAESLVRRELWCGLGFFMVQTLG 245

Query: 403 FMRLTFWELSWDVMEPICFYFTSMYFVAGYSFFLRTSREPSFEGFYKSRLNAKKQRLMKK 224
           FMRLTFWELSWDVMEPICF+ TS+YF+AGYSFFL+TS+EPSFEGF++SR  AK++RLMK 
Sbjct: 246 FMRLTFWELSWDVMEPICFFVTSIYFMAGYSFFLKTSKEPSFEGFFQSRFLAKQKRLMKS 305

Query: 223 KEFDVQRFNELRRAC--YPFSAEPPSS 149
           K FDV R+NELR+AC  Y  S+E  SS
Sbjct: 306 KNFDVGRYNELRKACQSYSSSSEQASS 332


>ref|XP_004164470.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Cucumis sativus]
          Length = 361

 Score =  193 bits (491), Expect = 4e-47
 Identities = 95/154 (61%), Positives = 117/154 (75%), Gaps = 2/154 (1%)
 Frame = -1

Query: 583 QVTKAIEGVITLSLAQSSDPRRKELENMEKEKALIDKQAGVLVRMELWAGLGLFVVQTAG 404
           QVTK IEG+I L     +D  RKE E ME +KA IDK+A  L R ELW GLG  V QTA 
Sbjct: 197 QVTKVIEGLIPLPSVIPNDAIRKEFEAMEIQKAAIDKRAETLTRRELWCGLGFLVAQTAA 256

Query: 403 FMRLTFWELSWDVMEPICFYFTSMYFVAGYSFFLRTSREPSFEGFYKSRLNAKKQRLMKK 224
           FMRLTFWEL+WDVMEPICFY TS YF+AGY+FFL+TS+EPSFEGF++SR + K++RLMK 
Sbjct: 257 FMRLTFWELTWDVMEPICFYVTSGYFIAGYTFFLKTSKEPSFEGFFQSRFSTKQKRLMKL 316

Query: 223 KEFDVQRFNELRRACYPFSA--EPPSSGVHSFEN 128
           + FD+ R+N+LRRAC+P S+  E PSS    ++N
Sbjct: 317 QNFDIARYNKLRRACFPNSSAQELPSSDSMVYDN 350


>ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like
            [Cucumis sativus]
          Length = 1058

 Score =  193 bits (491), Expect = 4e-47
 Identities = 95/147 (64%), Positives = 115/147 (78%), Gaps = 2/147 (1%)
 Frame = -1

Query: 583  QVTKAIEGVITLSLAQSSDPRRKELENMEKEKALIDKQAGVLVRMELWAGLGLFVVQTAG 404
            QVTKAIEG+I L     +D  RKE E ME +KA IDK+A  L R ELW GLG  V QTA 
Sbjct: 893  QVTKAIEGLIPLPSVIPNDAIRKEFEAMEIQKAAIDKRAETLTRRELWCGLGFLVAQTAA 952

Query: 403  FMRLTFWELSWDVMEPICFYFTSMYFVAGYSFFLRTSREPSFEGFYKSRLNAKKQRLMKK 224
            FMRLTFWEL+WDVMEPICFY TS YF+AGY+FFL+TS+EPSFEGF++SR + K++RLMK 
Sbjct: 953  FMRLTFWELTWDVMEPICFYVTSGYFIAGYTFFLKTSKEPSFEGFFQSRFSTKQKRLMKL 1012

Query: 223  KEFDVQRFNELRRACYPFSA--EPPSS 149
            + FD+ R+N+LRRAC+P S+  E PSS
Sbjct: 1013 QNFDIARYNKLRRACFPNSSAQELPSS 1039


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