BLASTX nr result
ID: Cimicifuga21_contig00004036
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00004036 (870 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK37103.1| unknown [Lotus japonicus] 149 8e-34 ref|XP_003636403.1| Signal recognition particle 14 kDa protein [... 147 2e-33 ref|XP_004145229.1| PREDICTED: signal recognition particle 14 kD... 146 5e-33 ref|XP_002330660.1| predicted protein [Populus trichocarpa] gi|2... 146 5e-33 gb|ABK93883.1| unknown [Populus trichocarpa] 146 5e-33 >gb|AFK37103.1| unknown [Lotus japonicus] Length = 123 Score = 149 bits (376), Expect = 8e-34 Identities = 73/89 (82%), Positives = 79/89 (88%) Frame = +2 Query: 116 QPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKATTNKMVTKGEAIEYRCLIRATDGKK 295 Q DPFLNELTS++ER+TEKGSVWVT KRSS+KSK NK+ T GEAIEYRCLIRATDGKK Sbjct: 5 QLDPFLNELTSLFERSTEKGSVWVTLKRSSLKSKVQRNKLATAGEAIEYRCLIRATDGKK 64 Query: 296 TISTSVSAKDHQRFQASYATVLKAHMHAL 382 TISTSV KDHQRFQASYAT+LKAHM AL Sbjct: 65 TISTSVGPKDHQRFQASYATILKAHMTAL 93 >ref|XP_003636403.1| Signal recognition particle 14 kDa protein [Medicago truncatula] gi|355502338|gb|AES83541.1| Signal recognition particle 14 kDa protein [Medicago truncatula] Length = 120 Score = 147 bits (372), Expect = 2e-33 Identities = 72/89 (80%), Positives = 80/89 (89%) Frame = +2 Query: 116 QPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKATTNKMVTKGEAIEYRCLIRATDGKK 295 Q DPFLNELTSM+ER+TEKG+VWVT KRSS+KSK NK+VT GEAIEYRCLIRAT+GKK Sbjct: 5 QLDPFLNELTSMFERSTEKGTVWVTLKRSSLKSKVQKNKLVTAGEAIEYRCLIRATNGKK 64 Query: 296 TISTSVSAKDHQRFQASYATVLKAHMHAL 382 TIST+V KDHQRFQASYAT+LKAHM AL Sbjct: 65 TISTTVGPKDHQRFQASYATILKAHMTAL 93 >ref|XP_004145229.1| PREDICTED: signal recognition particle 14 kDa protein-like [Cucumis sativus] gi|449474535|ref|XP_004154207.1| PREDICTED: signal recognition particle 14 kDa protein-like [Cucumis sativus] gi|449506299|ref|XP_004162708.1| PREDICTED: signal recognition particle 14 kDa protein-like [Cucumis sativus] Length = 118 Score = 146 bits (369), Expect = 5e-33 Identities = 72/89 (80%), Positives = 78/89 (87%) Frame = +2 Query: 116 QPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKATTNKMVTKGEAIEYRCLIRATDGKK 295 Q DPFLNELTSM+ER+TEKGSVWVT KRSS+KSK NKM T G+ IEYRCLIRATDGKK Sbjct: 5 QLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKK 64 Query: 296 TISTSVSAKDHQRFQASYATVLKAHMHAL 382 TISTSV AKDH RFQASY+T+LKAHM AL Sbjct: 65 TISTSVGAKDHLRFQASYSTILKAHMTAL 93 >ref|XP_002330660.1| predicted protein [Populus trichocarpa] gi|222872264|gb|EEF09395.1| predicted protein [Populus trichocarpa] Length = 121 Score = 146 bits (369), Expect = 5e-33 Identities = 70/89 (78%), Positives = 78/89 (87%) Frame = +2 Query: 116 QPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKATTNKMVTKGEAIEYRCLIRATDGKK 295 Q DPFLNELT++Y+ +T+KGS+WVT KRSSMKSK NKM T GE IEYRCLIRATDGKK Sbjct: 5 QLDPFLNELTTLYQNSTDKGSIWVTLKRSSMKSKVQRNKMTTNGEPIEYRCLIRATDGKK 64 Query: 296 TISTSVSAKDHQRFQASYATVLKAHMHAL 382 TISTSV A+DHQRFQASYAT+LKAHM AL Sbjct: 65 TISTSVGARDHQRFQASYATILKAHMTAL 93 >gb|ABK93883.1| unknown [Populus trichocarpa] Length = 121 Score = 146 bits (369), Expect = 5e-33 Identities = 70/89 (78%), Positives = 78/89 (87%) Frame = +2 Query: 116 QPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKATTNKMVTKGEAIEYRCLIRATDGKK 295 Q DPFLNELT++Y+ +T+KGS+WVT KRSSMKSK NKM T GE IEYRCLIRATDGKK Sbjct: 5 QLDPFLNELTTLYQNSTDKGSIWVTLKRSSMKSKVQRNKMTTNGEPIEYRCLIRATDGKK 64 Query: 296 TISTSVSAKDHQRFQASYATVLKAHMHAL 382 TISTSV A+DHQRFQASYAT+LKAHM AL Sbjct: 65 TISTSVGARDHQRFQASYATILKAHMTAL 93