BLASTX nr result

ID: Cimicifuga21_contig00004036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004036
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37103.1| unknown [Lotus japonicus]                              149   8e-34
ref|XP_003636403.1| Signal recognition particle 14 kDa protein [...   147   2e-33
ref|XP_004145229.1| PREDICTED: signal recognition particle 14 kD...   146   5e-33
ref|XP_002330660.1| predicted protein [Populus trichocarpa] gi|2...   146   5e-33
gb|ABK93883.1| unknown [Populus trichocarpa]                          146   5e-33

>gb|AFK37103.1| unknown [Lotus japonicus]
          Length = 123

 Score =  149 bits (376), Expect = 8e-34
 Identities = 73/89 (82%), Positives = 79/89 (88%)
 Frame = +2

Query: 116 QPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKATTNKMVTKGEAIEYRCLIRATDGKK 295
           Q DPFLNELTS++ER+TEKGSVWVT KRSS+KSK   NK+ T GEAIEYRCLIRATDGKK
Sbjct: 5   QLDPFLNELTSLFERSTEKGSVWVTLKRSSLKSKVQRNKLATAGEAIEYRCLIRATDGKK 64

Query: 296 TISTSVSAKDHQRFQASYATVLKAHMHAL 382
           TISTSV  KDHQRFQASYAT+LKAHM AL
Sbjct: 65  TISTSVGPKDHQRFQASYATILKAHMTAL 93


>ref|XP_003636403.1| Signal recognition particle 14 kDa protein [Medicago truncatula]
           gi|355502338|gb|AES83541.1| Signal recognition particle
           14 kDa protein [Medicago truncatula]
          Length = 120

 Score =  147 bits (372), Expect = 2e-33
 Identities = 72/89 (80%), Positives = 80/89 (89%)
 Frame = +2

Query: 116 QPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKATTNKMVTKGEAIEYRCLIRATDGKK 295
           Q DPFLNELTSM+ER+TEKG+VWVT KRSS+KSK   NK+VT GEAIEYRCLIRAT+GKK
Sbjct: 5   QLDPFLNELTSMFERSTEKGTVWVTLKRSSLKSKVQKNKLVTAGEAIEYRCLIRATNGKK 64

Query: 296 TISTSVSAKDHQRFQASYATVLKAHMHAL 382
           TIST+V  KDHQRFQASYAT+LKAHM AL
Sbjct: 65  TISTTVGPKDHQRFQASYATILKAHMTAL 93


>ref|XP_004145229.1| PREDICTED: signal recognition particle 14 kDa protein-like [Cucumis
           sativus] gi|449474535|ref|XP_004154207.1| PREDICTED:
           signal recognition particle 14 kDa protein-like [Cucumis
           sativus] gi|449506299|ref|XP_004162708.1| PREDICTED:
           signal recognition particle 14 kDa protein-like [Cucumis
           sativus]
          Length = 118

 Score =  146 bits (369), Expect = 5e-33
 Identities = 72/89 (80%), Positives = 78/89 (87%)
 Frame = +2

Query: 116 QPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKATTNKMVTKGEAIEYRCLIRATDGKK 295
           Q DPFLNELTSM+ER+TEKGSVWVT KRSS+KSK   NKM T G+ IEYRCLIRATDGKK
Sbjct: 5   QLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKK 64

Query: 296 TISTSVSAKDHQRFQASYATVLKAHMHAL 382
           TISTSV AKDH RFQASY+T+LKAHM AL
Sbjct: 65  TISTSVGAKDHLRFQASYSTILKAHMTAL 93


>ref|XP_002330660.1| predicted protein [Populus trichocarpa] gi|222872264|gb|EEF09395.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  146 bits (369), Expect = 5e-33
 Identities = 70/89 (78%), Positives = 78/89 (87%)
 Frame = +2

Query: 116 QPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKATTNKMVTKGEAIEYRCLIRATDGKK 295
           Q DPFLNELT++Y+ +T+KGS+WVT KRSSMKSK   NKM T GE IEYRCLIRATDGKK
Sbjct: 5   QLDPFLNELTTLYQNSTDKGSIWVTLKRSSMKSKVQRNKMTTNGEPIEYRCLIRATDGKK 64

Query: 296 TISTSVSAKDHQRFQASYATVLKAHMHAL 382
           TISTSV A+DHQRFQASYAT+LKAHM AL
Sbjct: 65  TISTSVGARDHQRFQASYATILKAHMTAL 93


>gb|ABK93883.1| unknown [Populus trichocarpa]
          Length = 121

 Score =  146 bits (369), Expect = 5e-33
 Identities = 70/89 (78%), Positives = 78/89 (87%)
 Frame = +2

Query: 116 QPDPFLNELTSMYERTTEKGSVWVTFKRSSMKSKATTNKMVTKGEAIEYRCLIRATDGKK 295
           Q DPFLNELT++Y+ +T+KGS+WVT KRSSMKSK   NKM T GE IEYRCLIRATDGKK
Sbjct: 5   QLDPFLNELTTLYQNSTDKGSIWVTLKRSSMKSKVQRNKMTTNGEPIEYRCLIRATDGKK 64

Query: 296 TISTSVSAKDHQRFQASYATVLKAHMHAL 382
           TISTSV A+DHQRFQASYAT+LKAHM AL
Sbjct: 65  TISTSVGARDHQRFQASYATILKAHMTAL 93


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