BLASTX nr result

ID: Cimicifuga21_contig00004034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004034
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283026.1| PREDICTED: reticulon-like protein B8 isoform...   371   e-100
ref|XP_002521590.1| conserved hypothetical protein [Ricinus comm...   350   3e-94
ref|XP_002302126.1| predicted protein [Populus trichocarpa] gi|2...   350   4e-94
ref|XP_002306759.1| predicted protein [Populus trichocarpa] gi|2...   342   1e-91
ref|NP_001241930.1| uncharacterized protein LOC100787981 [Glycin...   336   5e-90

>ref|XP_002283026.1| PREDICTED: reticulon-like protein B8 isoform 3 [Vitis vinifera]
           gi|225446771|ref|XP_002283019.1| PREDICTED:
           reticulon-like protein B8 isoform 2 [Vitis vinifera]
           gi|225446773|ref|XP_002283015.1| PREDICTED:
           reticulon-like protein B8 isoform 1 [Vitis vinifera]
           gi|302143506|emb|CBI22067.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  371 bits (952), Expect = e-100
 Identities = 176/248 (70%), Positives = 211/248 (85%)
 Frame = -2

Query: 929 MPEGIKAEHLLNSIMDTFADNVPKPKSSSFFEEDRSNSVSDHINRHFGREKPVYNILGGG 750
           MPEGI AE LLN+IM+T +DN  K KS SFFEE++SNSV+    R FGREKPVYN+LG G
Sbjct: 1   MPEGITAEKLLNNIMETISDNAQKKKSVSFFEEEKSNSVTSQFKRLFGREKPVYNLLGAG 60

Query: 749 KPADCLLWRNKKISASVLTGATAIWVLFEWLNYHLLTFVFFSLVLGMVAQFVWSNASSLL 570
           K AD +LWRNKKISAS +TGAT IWVLFEWLNYH LT + F++VLGM+AQFVWSNAS + 
Sbjct: 61  KSADLMLWRNKKISASFITGATLIWVLFEWLNYHFLTLLCFAVVLGMIAQFVWSNASGVF 120

Query: 569 NRSPSKLPRLRLPEELFVNIGVSVGTEINRFLGFLQDVASGGNLKQFLMVVLSLWAAAVI 390
           +RS S++PR+ LP+ELF NIGV+VG +IN+ LGFLQDVA GGNLKQFL+VV+SLWAAAVI
Sbjct: 121 SRSSSEVPRIVLPDELFQNIGVAVGVQINQALGFLQDVACGGNLKQFLLVVVSLWAAAVI 180

Query: 389 GSWCNFLTVVYIGFVAAHTLPVLYERYDDQIDDFVYRLLHQLQHNYRKIDYSVLSRIPTR 210
           GSWCNFLTV+Y+GF+AAHTLPVLYERY+DQ+D FVY++L QLQHNYRK+D   LS+IP  
Sbjct: 181 GSWCNFLTVLYVGFIAAHTLPVLYERYEDQVDGFVYQVLGQLQHNYRKLDSGFLSKIPKG 240

Query: 209 NRRGKKFE 186
           + +GKK E
Sbjct: 241 SLKGKKHE 248


>ref|XP_002521590.1| conserved hypothetical protein [Ricinus communis]
           gi|223539268|gb|EEF40861.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 247

 Score =  350 bits (899), Expect = 3e-94
 Identities = 173/248 (69%), Positives = 207/248 (83%)
 Frame = -2

Query: 929 MPEGIKAEHLLNSIMDTFADNVPKPKSSSFFEEDRSNSVSDHINRHFGREKPVYNILGGG 750
           M E   AE  LN++++  AD+VPK KS SFFEE+ S SV+   +R FGR+KPV+++LGGG
Sbjct: 1   MAEKKTAEKFLNNLVEVLADSVPKQKSVSFFEEETS-SVTARFHRLFGRQKPVHHLLGGG 59

Query: 749 KPADCLLWRNKKISASVLTGATAIWVLFEWLNYHLLTFVFFSLVLGMVAQFVWSNASSLL 570
           K AD LLWRNKKISASVLTGATAIW+LFEWLNYH LT V  +LVLGM+AQFVW+NAS L+
Sbjct: 60  KSADVLLWRNKKISASVLTGATAIWILFEWLNYHFLTLVCLALVLGMLAQFVWTNASGLV 119

Query: 569 NRSPSKLPRLRLPEELFVNIGVSVGTEINRFLGFLQDVASGGNLKQFLMVVLSLWAAAVI 390
           NRSP K+PRL LP+E+FV+IG SVG EIN  L FLQDV+ GGNLKQFL+VV SLWA+AVI
Sbjct: 120 NRSPPKVPRLVLPDEVFVSIGRSVGVEINHALQFLQDVSCGGNLKQFLVVVASLWASAVI 179

Query: 389 GSWCNFLTVVYIGFVAAHTLPVLYERYDDQIDDFVYRLLHQLQHNYRKIDYSVLSRIPTR 210
           GSWCNFLTV+Y GFVAAHTLPVLYERY+DQ+DDFVY++L QLQ +YRK+D  +LS+IP  
Sbjct: 180 GSWCNFLTVLYTGFVAAHTLPVLYERYEDQVDDFVYKVLEQLQGHYRKLDTGLLSKIPKG 239

Query: 209 NRRGKKFE 186
           N +GKK E
Sbjct: 240 NLKGKKHE 247


>ref|XP_002302126.1| predicted protein [Populus trichocarpa] gi|222843852|gb|EEE81399.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  350 bits (897), Expect = 4e-94
 Identities = 169/248 (68%), Positives = 205/248 (82%)
 Frame = -2

Query: 929 MPEGIKAEHLLNSIMDTFADNVPKPKSSSFFEEDRSNSVSDHINRHFGREKPVYNILGGG 750
           MPE I AE L +++++T ADNVPK KS SFFEE    SV+  INR FGR+KPV++ILGGG
Sbjct: 1   MPEKITAESLFSNLVETIADNVPKQKSVSFFEEGEE-SVTSRINRLFGRQKPVHHILGGG 59

Query: 749 KPADCLLWRNKKISASVLTGATAIWVLFEWLNYHLLTFVFFSLVLGMVAQFVWSNASSLL 570
           K AD LLWRNKKISA VLTGATAIWVLFEWLNYHLL+ V F+L LGM+AQFVW NAS L+
Sbjct: 60  KSADVLLWRNKKISAGVLTGATAIWVLFEWLNYHLLSLVCFALALGMLAQFVWINASGLM 119

Query: 569 NRSPSKLPRLRLPEELFVNIGVSVGTEINRFLGFLQDVASGGNLKQFLMVVLSLWAAAVI 390
           NRSPS++PRL LP+++FV+IG S+G E+NR L FLQD++ GGNLKQFL  ++SLW AA+I
Sbjct: 120 NRSPSQVPRLVLPDDIFVSIGRSIGAEVNRALLFLQDLSCGGNLKQFLAAIVSLWVAAII 179

Query: 389 GSWCNFLTVVYIGFVAAHTLPVLYERYDDQIDDFVYRLLHQLQHNYRKIDYSVLSRIPTR 210
           GSWCNFLTV+YIGFVAAHTLPVLYERY+DQ+DDFV++   QL++NY+K+D  VL +IP  
Sbjct: 180 GSWCNFLTVMYIGFVAAHTLPVLYERYEDQVDDFVFKAFDQLRNNYQKLDAGVLGKIPKG 239

Query: 209 NRRGKKFE 186
              GKK E
Sbjct: 240 KFNGKKHE 247


>ref|XP_002306759.1| predicted protein [Populus trichocarpa] gi|222856208|gb|EEE93755.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  342 bits (876), Expect = 1e-91
 Identities = 165/248 (66%), Positives = 209/248 (84%)
 Frame = -2

Query: 929 MPEGIKAEHLLNSIMDTFADNVPKPKSSSFFEEDRSNSVSDHINRHFGREKPVYNILGGG 750
           MPE I AE L+N++++TFAD VPK KS SFFEE+ + SV+  +NR FGR+KP++++LGGG
Sbjct: 1   MPEKITAEKLINNLVETFADTVPKKKSVSFFEEE-NKSVTSRLNRLFGRQKPIHHLLGGG 59

Query: 749 KPADCLLWRNKKISASVLTGATAIWVLFEWLNYHLLTFVFFSLVLGMVAQFVWSNASSLL 570
           K AD LLWRNKKISA VL GATAIWVLFE LNY+ L+ V +++VLGM+AQFVW+NAS L+
Sbjct: 60  KSADVLLWRNKKISAGVLIGATAIWVLFELLNYNFLSLVCYAVVLGMLAQFVWTNASGLI 119

Query: 569 NRSPSKLPRLRLPEELFVNIGVSVGTEINRFLGFLQDVASGGNLKQFLMVVLSLWAAAVI 390
           NR+PS++PRL LP+++FV+IG S+G+E+NR L FLQDV+ GGNLK+FL+VV SL  AA+I
Sbjct: 120 NRAPSQVPRLVLPKDIFVSIGRSIGSEVNRDLQFLQDVSCGGNLKKFLVVVASLLVAAII 179

Query: 389 GSWCNFLTVVYIGFVAAHTLPVLYERYDDQIDDFVYRLLHQLQHNYRKIDYSVLSRIPTR 210
           GSWCNFLTV+YIGFVAAHTLPVLYERYDD++DDFV+  L QLQ+NYRK+D   LS+IP  
Sbjct: 180 GSWCNFLTVIYIGFVAAHTLPVLYERYDDEVDDFVHMALDQLQYNYRKLDAGFLSKIPKG 239

Query: 209 NRRGKKFE 186
             +GKK E
Sbjct: 240 KFKGKKHE 247


>ref|NP_001241930.1| uncharacterized protein LOC100787981 [Glycine max]
           gi|255638847|gb|ACU19727.1| unknown [Glycine max]
          Length = 245

 Score =  336 bits (862), Expect = 5e-90
 Identities = 161/248 (64%), Positives = 202/248 (81%)
 Frame = -2

Query: 929 MPEGIKAEHLLNSIMDTFADNVPKPKSSSFFEEDRSNSVSDHINRHFGREKPVYNILGGG 750
           M E I AE LLN++++T  +   K KS  FFEED+S+SVS   NR FGR+KPV++ILGGG
Sbjct: 1   MSEKITAEKLLNTLVETLTE---KQKSGLFFEEDKSSSVSSQFNRLFGRQKPVHHILGGG 57

Query: 749 KPADCLLWRNKKISASVLTGATAIWVLFEWLNYHLLTFVFFSLVLGMVAQFVWSNASSLL 570
           K AD LLWRNKKISASVL+ ATAIWVLFEWLNY+ LT +FF + LGM+ QF+W+NAS L 
Sbjct: 58  KSADVLLWRNKKISASVLSAATAIWVLFEWLNYNFLTILFFVVALGMLGQFLWTNASGLF 117

Query: 569 NRSPSKLPRLRLPEELFVNIGVSVGTEINRFLGFLQDVASGGNLKQFLMVVLSLWAAAVI 390
           +R PSK+PR   P+ +FVNI  +VG E+NR L FLQDV+ GGNLKQFL+V++SLWA AVI
Sbjct: 118 SRKPSKVPRFVFPDGIFVNIATAVGAEVNRGLRFLQDVSCGGNLKQFLIVIVSLWAGAVI 177

Query: 389 GSWCNFLTVVYIGFVAAHTLPVLYERYDDQIDDFVYRLLHQLQHNYRKIDYSVLSRIPTR 210
           GSWCNFLTV+YIGFVAAHTLPVLYERY+DQ+D+FVY++  QLQ++Y+K+D  +LS+IP  
Sbjct: 178 GSWCNFLTVMYIGFVAAHTLPVLYERYEDQVDNFVYKVFDQLQNHYQKLDTGLLSKIPKG 237

Query: 209 NRRGKKFE 186
             +GKK+E
Sbjct: 238 KLKGKKYE 245


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